RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 ZNF861PO60384 105 aa8.09□□□□□ -1.11
USP44-202ENST00000393091 SMR3BP02814 79 aaPredicted RBP8.08□□□□□ -1.12
USP44-202ENST00000393091 RPL28P46779 137 aaKnown RBP8.08□□□□□ -1.12
USP44-202ENST00000393091 RPL37AP8A6NKH3 93 aa8.08□□□□□ -1.12
USP44-202ENST00000393091 S100A7L2Q5SY68 101 aa8.07□□□□□ -1.12
USP44-202ENST00000393091 INAFM2P0DMQ5 153 aa8.07□□□□□ -1.12
USP44-202ENST00000393091 FXYD2P54710 66 aa8.07□□□□□ -1.12
USP44-202ENST00000393091 PRO1933Q9H354 126 aa8.07□□□□□ -1.12
USP44-202ENST00000393091 ZNF73O43830 326 aaPredicted RBP8.06□□□□□ -1.12
USP44-202ENST00000393091 C1orf137Q5JT78 98 aa8.06□□□□□ -1.12
USP44-202ENST00000393091 ELOF1P60002 83 aaKnown RBP8.06□□□□□ -1.12
USP44-202ENST00000393091 BVES-AS1Q5T3Y7 98 aa8.06□□□□□ -1.12
USP44-202ENST00000393091 Q6ZRX8 168 aa8.06□□□□□ -1.12
USP44-202ENST00000393091 M0R143 59 aa8.05□□□□□ -1.12
USP44-202ENST00000393091 GAGE10A6NGK3 116 aa8.04□□□□□ -1.12
USP44-202ENST00000393091 DIRC1Q969H9 104 aa8.03□□□□□ -1.12
USP44-202ENST00000393091 KRTAP4-5Q9BYR2 181 aa8.03□□□□□ -1.12
USP44-202ENST00000393091 PRO1854Q9UHT4 67 aa8.03□□□□□ -1.12
USP44-202ENST00000393091 SMIM11BQ8TCY0 68 aa8.03□□□□□ -1.12
USP44-202ENST00000393091 FAT3Q8TDW7 4589 aa8.03□□□□□ -1.12
USP44-202ENST00000393091 CTAG1AP78358 180 aa8.01□□□□□ -1.13
USP44-202ENST00000393091 LINC00483Q53H64 154 aa8.01□□□□□ -1.13
USP44-202ENST00000393091 SMCR5Q8TEV8 140 aa8.01□□□□□ -1.13
USP44-202ENST00000393091 DHRS4-AS1Q9P1J3 65 aa8.01□□□□□ -1.13
USP44-202ENST00000393091 RPL13AP40429 203 aaKnown RBP8.01□□□□□ -1.13
USP44-202ENST00000393091 OXTP01178 125 aa8□□□□□ -1.13
USP44-202ENST00000393091 Q9BRP9 147 aa8□□□□□ -1.13
USP44-202ENST00000393091 ETDCA0A1B0GVM5 59 aa8□□□□□ -1.13
USP44-202ENST00000393091 RAB37Q96AX2 223 aa8□□□□□ -1.13
USP44-202ENST00000393091 A0A1B0GX51 115 aa7.99□□□□□ -1.13
USP44-202ENST00000393091 A6NDN8 102 aa7.99□□□□□ -1.13
USP44-202ENST00000393091 KRTAP1-4P0C5Y4 121 aa7.99□□□□□ -1.13
USP44-202ENST00000393091 SPRR1BP22528 89 aa7.99□□□□□ -1.13
USP44-202ENST00000393091 FAM229BQ4G0N7 80 aa7.99□□□□□ -1.13
USP44-202ENST00000393091 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
USP44-202ENST00000393091 FAM19A1Q7Z5A9 133 aa7.99□□□□□ -1.13
USP44-202ENST00000393091 OR13C6PQ8NH95 151 aa7.99□□□□□ -1.13
USP44-202ENST00000393091 COX7BP24311 80 aa7.98□□□□□ -1.13
USP44-202ENST00000393091 C6orf99Q4VX62 202 aa7.98□□□□□ -1.13
USP44-202ENST00000393091 UBE2AP49459 152 aa7.98□□□□□ -1.13
USP44-202ENST00000393091 HINT1P49773 126 aaPredicted RBP7.97□□□□□ -1.13
USP44-202ENST00000393091 ZNF706Q9Y5V0 76 aaPredicted RBP7.97□□□□□ -1.13
USP44-202ENST00000393091 H0YGX0 51 aa7.97□□□□□ -1.13
USP44-202ENST00000393091 LINC01600Q96MT4 127 aa7.97□□□□□ -1.13
USP44-202ENST00000393091 NHP2Q9NX24 153 aaKnown RBP7.96□□□□□ -1.13
USP44-202ENST00000393091 ABCA13Q86UQ4 5058 aa7.96□□□□□ -1.14
USP44-202ENST00000393091 TNXBP22105 4242 aa7.96□□□□□ -1.14
USP44-202ENST00000393091 LINC00575Q6W349 94 aa7.96□□□□□ -1.14
USP44-202ENST00000393091 IGLV5-48A0A075B6I7 105 aa7.95□□□□□ -1.14
USP44-202ENST00000393091 VAMP3Q15836 100 aa7.95□□□□□ -1.14
USP44-202ENST00000393091 TSPAN13O95857 204 aa7.95□□□□□ -1.14
USP44-202ENST00000393091 PPDPFLQ8WWR9 84 aa7.95□□□□□ -1.14
USP44-202ENST00000393091 PRLHP81277 87 aa7.94□□□□□ -1.14
USP44-202ENST00000393091 SPRR4Q96PI1 79 aa7.94□□□□□ -1.14
USP44-202ENST00000393091 SRRM2Q9UQ35 2752 aaKnown RBP7.94□□□□□ -1.14
USP44-202ENST00000393091 KRTAP10-8P60410 259 aa7.92□□□□□ -1.14
USP44-202ENST00000393091 LINC01547P58512 204 aaPredicted RBP7.92□□□□□ -1.14
USP44-202ENST00000393091 TRIAP1O43715 76 aa7.91□□□□□ -1.14
USP44-202ENST00000393091 ERC2-IT1O76042 136 aa7.9□□□□□ -1.14
USP44-202ENST00000393091 H3BQ85 93 aa7.9□□□□□ -1.14
USP44-202ENST00000393091 K7ERJ3 54 aa7.9□□□□□ -1.14
USP44-202ENST00000393091 OCIAD2Q56VL3 154 aa7.89□□□□□ -1.15
USP44-202ENST00000393091 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.89□□□□□ -1.15
USP44-202ENST00000393091 MT1HL1P0DM35 61 aa7.88□□□□□ -1.15
USP44-202ENST00000393091 SNHG12Q9BXW3 62 aa7.88□□□□□ -1.15
USP44-202ENST00000393091 hADV29S1A0JD25 119 aa7.87□□□□□ -1.15
USP44-202ENST00000393091 TAX1BP3O14907 124 aa7.85□□□□□ -1.15
USP44-202ENST00000393091 SLC25A20O43772 301 aa7.85□□□□□ -1.15
USP44-202ENST00000393091 TRACP01848 142 aa7.85□□□□□ -1.15
USP44-202ENST00000393091 COX6CP09669 75 aa7.85□□□□□ -1.15
USP44-202ENST00000393091 HIGD2AQ9BW72 106 aa7.85□□□□□ -1.15
USP44-202ENST00000393091 MYCBP2O75592 4640 aa7.85□□□□□ -1.15
USP44-202ENST00000393091 C9orf118A6NHY6 69 aa7.85□□□□□ -1.15
USP44-202ENST00000393091 FAM218AQ96MZ4 157 aa7.85□□□□□ -1.15
USP44-202ENST00000393091 TEX49A0A1B0GTD5 131 aa7.84□□□□□ -1.15
USP44-202ENST00000393091 IGLV8-61A0A075B6I0 122 aa7.84□□□□□ -1.15
USP44-202ENST00000393091 LST1O00453 97 aa7.83□□□□□ -1.16
USP44-202ENST00000393091 PCLOQ9Y6V0 5065 aa7.83□□□□□ -1.16
USP44-202ENST00000393091 SNCGO76070 127 aa7.83□□□□□ -1.16
USP44-202ENST00000393091 GHRHP01286 108 aa7.83□□□□□ -1.16
USP44-202ENST00000393091 KRTAP13-2Q52LG2 175 aa7.83□□□□□ -1.16
USP44-202ENST00000393091 SMIM29Q86T20 159 aa7.83□□□□□ -1.16
USP44-202ENST00000393091 Q1RN00 199 aa7.83□□□□□ -1.16
USP44-202ENST00000393091 CRYGAP11844 174 aa7.82□□□□□ -1.16
USP44-202ENST00000393091 LYRM7Q5U5X0 104 aa7.82□□□□□ -1.16
USP44-202ENST00000393091 COL5A1-AS1Q5SY13 56 aa7.82□□□□□ -1.16
USP44-202ENST00000393091 Q8N377 158 aa7.82□□□□□ -1.16
USP44-202ENST00000393091 LRP1Q07954 4544 aaKnown RBP7.81□□□□□ -1.16
USP44-202ENST00000393091 ST20-AS1Q8NBB2 130 aa7.81□□□□□ -1.16
USP44-202ENST00000393091 TRBV20-1A0A075B6N2 111 aa7.81□□□□□ -1.16
USP44-202ENST00000393091 A0A087X002 238 aa7.81□□□□□ -1.16
USP44-202ENST00000393091 H7C2G1 150 aa7.81□□□□□ -1.16
USP44-202ENST00000393091 SSBP3-AS1Q7Z2R9 100 aa7.8□□□□□ -1.16
USP44-202ENST00000393091 RPS29P62273 56 aaKnown RBP7.8□□□□□ -1.16
USP44-202ENST00000393091 PSMB2P49721 201 aa7.79□□□□□ -1.16
USP44-202ENST00000393091 A0A1W2PPM0 123 aa7.77□□□□□ -1.16
USP44-202ENST00000393091 Q6ZQY7 126 aa7.77□□□□□ -1.16
USP44-202ENST00000393091 ATXN8Q156A1 80 aa7.77□□□□□ -1.17
USP44-202ENST00000393091 CLEC2BQ92478 149 aa7.77□□□□□ -1.17
USP44-202ENST00000393091 CD164Q04900 197 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms