RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 NKAPP1Q8N9T2 125 aa4.2□□□□□ -1.74
UBBP1-201ENST00000392399 A0A0B4J2C4 111 aa4.19□□□□□ -1.74
UBBP1-201ENST00000392399 VPREB1P12018 145 aa4.19□□□□□ -1.74
UBBP1-201ENST00000392399 FXYD2P54710 66 aa4.19□□□□□ -1.74
UBBP1-201ENST00000392399 PRR3P79522 188 aaKnown RBP4.19□□□□□ -1.74
UBBP1-201ENST00000392399 BATFQ16520 125 aa4.19□□□□□ -1.74
UBBP1-201ENST00000392399 LINC00167Q96N53 147 aa4.19□□□□□ -1.74
UBBP1-201ENST00000392399 PSORS1C2Q9UIG4 136 aa4.19□□□□□ -1.74
UBBP1-201ENST00000392399 MYCBP2O75592 4640 aa4.18□□□□□ -1.74
UBBP1-201ENST00000392399 PCLOQ9Y6V0 5065 aa4.18□□□□□ -1.74
UBBP1-201ENST00000392399 M0R378 163 aa4.18□□□□□ -1.74
UBBP1-201ENST00000392399 TAX1BP3O14907 124 aa4.18□□□□□ -1.74
UBBP1-201ENST00000392399 NDUFC2O95298 119 aa4.17□□□□□ -1.74
UBBP1-201ENST00000392399 C1orf137Q5JT78 98 aa4.17□□□□□ -1.74
UBBP1-201ENST00000392399 SPINK6Q6UWN8 80 aa4.17□□□□□ -1.74
UBBP1-201ENST00000392399 FLG2Q5D862 2391 aaPredicted RBP4.16□□□□□ -1.74
UBBP1-201ENST00000392399 IGLV1-50A0A075B6I6 118 aa4.16□□□□□ -1.74
UBBP1-201ENST00000392399 TRBV10-2A0A0K0K1G8 114 aa4.16□□□□□ -1.74
UBBP1-201ENST00000392399 C9orf118A6NHY6 69 aa4.16□□□□□ -1.74
UBBP1-201ENST00000392399 KRTAP9-7A8MTY7 169 aa4.16□□□□□ -1.74
UBBP1-201ENST00000392399 IGLV7-43P04211 117 aa4.16□□□□□ -1.74
UBBP1-201ENST00000392399 ADAMTSL4-AS1Q5T5F5 129 aa4.16□□□□□ -1.74
UBBP1-201ENST00000392399 KRTAP11-1Q8IUC1 163 aa4.16□□□□□ -1.74
UBBP1-201ENST00000392399 MUSTN1Q8IVN3 82 aa4.16□□□□□ -1.74
UBBP1-201ENST00000392399 DAND5Q8N907 189 aa4.16□□□□□ -1.74
UBBP1-201ENST00000392399 LINC00308Q8TCZ7 52 aa4.16□□□□□ -1.74
UBBP1-201ENST00000392399 NHP2Q9NX24 153 aaKnown RBP4.16□□□□□ -1.74
UBBP1-201ENST00000392399 FAT3Q8TDW7 4589 aa4.16□□□□□ -1.74
UBBP1-201ENST00000392399 PKHD1L1Q86WI1 4243 aa4.16□□□□□ -1.74
UBBP1-201ENST00000392399 LRP1Q07954 4544 aaKnown RBP4.15□□□□□ -1.74
UBBP1-201ENST00000392399 A4D1N5 150 aa4.15□□□□□ -1.75
UBBP1-201ENST00000392399 GAGE10A6NGK3 116 aa4.15□□□□□ -1.75
UBBP1-201ENST00000392399 RPL37AP8A6NKH3 93 aa4.15□□□□□ -1.75
UBBP1-201ENST00000392399 BCE1O60756 84 aa4.15□□□□□ -1.75
UBBP1-201ENST00000392399 OXTP01178 125 aa4.15□□□□□ -1.75
UBBP1-201ENST00000392399 CFC1BP0CG36 223 aa4.15□□□□□ -1.75
UBBP1-201ENST00000392399 CFC1P0CG37 223 aa4.15□□□□□ -1.75
UBBP1-201ENST00000392399 LYRM7Q5U5X0 104 aa4.15□□□□□ -1.75
UBBP1-201ENST00000392399 Q8NDZ9 215 aa4.15□□□□□ -1.75
UBBP1-201ENST00000392399 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
UBBP1-201ENST00000392399 CBY1Q9Y3M2 126 aa4.15□□□□□ -1.75
UBBP1-201ENST00000392399 IGKV2-28A0A075B6P5 120 aa4.14□□□□□ -1.75
UBBP1-201ENST00000392399 A0A1B0GV90 55 aa4.14□□□□□ -1.75
UBBP1-201ENST00000392399 ZNF861PO60384 105 aa4.14□□□□□ -1.75
UBBP1-201ENST00000392399 IGKV2D-28P01615 120 aa4.14□□□□□ -1.75
UBBP1-201ENST00000392399 RPL28P46779 137 aaKnown RBP4.14□□□□□ -1.75
UBBP1-201ENST00000392399 REG3GQ6UW15 175 aa4.14□□□□□ -1.75
UBBP1-201ENST00000392399 DIRC1Q969H9 104 aa4.14□□□□□ -1.75
UBBP1-201ENST00000392399 PRO1854Q9UHT4 67 aa4.14□□□□□ -1.75
UBBP1-201ENST00000392399 A0A1W2PPM0 123 aa4.13□□□□□ -1.75
UBBP1-201ENST00000392399 KRTAP29-1A8MX34 341 aaPredicted RBP4.13□□□□□ -1.75
UBBP1-201ENST00000392399 SOSTDC1Q6X4U4 206 aa4.13□□□□□ -1.75
UBBP1-201ENST00000392399 RAB37Q96AX2 223 aa4.13□□□□□ -1.75
UBBP1-201ENST00000392399 TMEM126AQ9H061 195 aa4.13□□□□□ -1.75
UBBP1-201ENST00000392399 KCNQ1DNQ9H478 68 aa4.13□□□□□ -1.75
UBBP1-201ENST00000392399 DMBT1Q9UGM3 2413 aaPredicted RBP4.12□□□□□ -1.75
UBBP1-201ENST00000392399 TRAV13-2A0A0B4J235 113 aa4.12□□□□□ -1.75
UBBP1-201ENST00000392399 H0Y9J4 135 aa4.12□□□□□ -1.75
UBBP1-201ENST00000392399 K7ERJ3 54 aa4.12□□□□□ -1.75
UBBP1-201ENST00000392399 PRYO14603 147 aa4.12□□□□□ -1.75
UBBP1-201ENST00000392399 NCR3O14931 201 aa4.12□□□□□ -1.75
UBBP1-201ENST00000392399 FABP2P12104 132 aa4.12□□□□□ -1.75
UBBP1-201ENST00000392399 NPC2P61916 151 aa4.12□□□□□ -1.75
UBBP1-201ENST00000392399 S100A7L2Q5SY68 101 aa4.12□□□□□ -1.75
UBBP1-201ENST00000392399 GTF2H5Q6ZYL4 71 aa4.12□□□□□ -1.75
UBBP1-201ENST00000392399 TRBV10-3A0A0K0K1G6 114 aa4.11□□□□□ -1.75
UBBP1-201ENST00000392399 H3BUT2 72 aa4.11□□□□□ -1.75
UBBP1-201ENST00000392399 TSPAN13O95857 204 aa4.11□□□□□ -1.75
UBBP1-201ENST00000392399 IGLV6-57P01721 117 aa4.11□□□□□ -1.75
UBBP1-201ENST00000392399 SPRR1AP35321 89 aa4.11□□□□□ -1.75
UBBP1-201ENST00000392399 UBE2AP49459 152 aa4.11□□□□□ -1.75
UBBP1-201ENST00000392399 LINC00337Q8N6G1 96 aa4.11□□□□□ -1.75
UBBP1-201ENST00000392399 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
UBBP1-201ENST00000392399 TRBV20-1A0A075B6N2 111 aa4.1□□□□□ -1.75
UBBP1-201ENST00000392399 K7EP34 96 aa4.1□□□□□ -1.75
UBBP1-201ENST00000392399 UBE2V1Q13404 147 aa4.1□□□□□ -1.75
UBBP1-201ENST00000392399 VAMP3Q15836 100 aa4.1□□□□□ -1.75
UBBP1-201ENST00000392399 FAM19A1Q7Z5A9 133 aa4.1□□□□□ -1.75
UBBP1-201ENST00000392399 KRTAP13-1Q8IUC0 172 aa4.1□□□□□ -1.75
UBBP1-201ENST00000392399 LINC01600Q96MT4 127 aa4.1□□□□□ -1.75
UBBP1-201ENST00000392399 ETDCA0A1B0GVM5 59 aa4.09□□□□□ -1.75
UBBP1-201ENST00000392399 KRTAP4-16G5E9R7 235 aaPredicted RBP4.09□□□□□ -1.75
UBBP1-201ENST00000392399 OR13C6PQ8NH95 151 aa4.09□□□□□ -1.75
UBBP1-201ENST00000392399 SPCS1Q9Y6A9 102 aa4.09□□□□□ -1.75
UBBP1-201ENST00000392399 TRAV23DV6A0A075B6W5 121 aa4.08□□□□□ -1.76
UBBP1-201ENST00000392399 COX6CP09669 75 aa4.08□□□□□ -1.76
UBBP1-201ENST00000392399 RPL13AP40429 203 aaKnown RBP4.08□□□□□ -1.76
UBBP1-201ENST00000392399 HERC1Q15751 4861 aa4.08□□□□□ -1.76
UBBP1-201ENST00000392399 B5MCH6 92 aa4.07□□□□□ -1.76
UBBP1-201ENST00000392399 ZNF73O43830 326 aaPredicted RBP4.07□□□□□ -1.76
UBBP1-201ENST00000392399 KRTAP10-8P60410 259 aa4.07□□□□□ -1.76
UBBP1-201ENST00000392399 PRLHP81277 87 aa4.07□□□□□ -1.76
UBBP1-201ENST00000392399 Q1RN00 199 aa4.07□□□□□ -1.76
UBBP1-201ENST00000392399 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
UBBP1-201ENST00000392399 TNXBP22105 4242 aa4.06□□□□□ -1.76
UBBP1-201ENST00000392399 TRBV7-6A0A0J9YX20 115 aa4.06□□□□□ -1.76
UBBP1-201ENST00000392399 TRIAP1O43715 76 aa4.06□□□□□ -1.76
UBBP1-201ENST00000392399 KRTAP1-4P0C5Y4 121 aa4.06□□□□□ -1.76
UBBP1-201ENST00000392399 PSMB2P49721 201 aa4.06□□□□□ -1.76
UBBP1-201ENST00000392399 Q6ZRX8 168 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms