RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 UBL5Q9BZL1 73 aa0.33□□□□□ -2.36
TRAJ39-201ENST00000390498 FXYD6Q9H0Q3 95 aa0.33□□□□□ -2.36
TRAJ39-201ENST00000390498 KCNQ1DNQ9H478 68 aa0.33□□□□□ -2.36
TRAJ39-201ENST00000390498 CACNA1EQ15878 2313 aa0.32□□□□□ -2.36
TRAJ39-201ENST00000390498 CELSR2Q9HCU4 2923 aa0.32□□□□□ -2.36
TRAJ39-201ENST00000390498 ABCA6Q8N139 1617 aa0.32□□□□□ -2.36
TRAJ39-201ENST00000390498 USF3Q68DE3 2245 aa0.32□□□□□ -2.36
TRAJ39-201ENST00000390498 DEFB131BA0A096LNP1 70 aa0.32□□□□□ -2.36
TRAJ39-201ENST00000390498 C4AP0C0L4 1744 aa0.32□□□□□ -2.36
TRAJ39-201ENST00000390498 C4BP0C0L5 1744 aa0.32□□□□□ -2.36
TRAJ39-201ENST00000390498 TJP1Q07157 1748 aa0.32□□□□□ -2.36
TRAJ39-201ENST00000390498 C2CD3Q4AC94 2353 aa0.32□□□□□ -2.36
TRAJ39-201ENST00000390498 FBN3Q75N90 2809 aa0.32□□□□□ -2.36
TRAJ39-201ENST00000390498 FCGBPQ9Y6R7 5405 aaPredicted RBP0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 ANK2Q01484 3957 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 DEPDC5O75140 1603 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 PLCE1Q9P212 2302 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 C3P01024 1663 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 NOTCH1P46531 2555 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 ABCA12Q86UK0 2595 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 TRIOBPQ9H2D6 2365 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 NDUFA3O95167 84 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 KLK9Q2XQG4 91 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 DEFB114Q30KQ6 69 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 WFDC13Q8IUB5 93 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 PRO3102Q9H379 93 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 ABCC6O95255 1503 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 ABCA10Q8WWZ4 1543 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 PLXNC1O60486 1568 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 PTPRZ1P23471 2315 aaPredicted RBP0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 PTPRQQ9UMZ3 2332 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 BDP1A6H8Y1 2624 aa0.31□□□□□ -2.36
TRAJ39-201ENST00000390498 DOPEY2Q9Y3R5 2298 aa0.3□□□□□ -2.36
TRAJ39-201ENST00000390498 CHD9Q3L8U1 2897 aa0.3□□□□□ -2.36
TRAJ39-201ENST00000390498 SPTBN2O15020 2390 aa0.3□□□□□ -2.36
TRAJ39-201ENST00000390498 ETDCA0A1B0GVM5 59 aa0.3□□□□□ -2.36
TRAJ39-201ENST00000390498 LINC01549A6NIU2 74 aa0.3□□□□□ -2.36
TRAJ39-201ENST00000390498 SFTA3P0C7M3 94 aa0.3□□□□□ -2.36
TRAJ39-201ENST00000390498 LELP1Q5T871 98 aa0.3□□□□□ -2.36
TRAJ39-201ENST00000390498 SMIM5Q71RC9 77 aa0.3□□□□□ -2.36
TRAJ39-201ENST00000390498 U3KQA8 63 aa0.3□□□□□ -2.36
TRAJ39-201ENST00000390498 TNCP24821 2201 aa0.3□□□□□ -2.36
TRAJ39-201ENST00000390498 ALS2Q96Q42 1657 aa0.3□□□□□ -2.36
TRAJ39-201ENST00000390498 APCP25054 2843 aa0.29□□□□□ -2.36
TRAJ39-201ENST00000390498 GLI2P10070 1586 aa0.29□□□□□ -2.36
TRAJ39-201ENST00000390498 MAST1Q9Y2H9 1570 aa0.29□□□□□ -2.36
TRAJ39-201ENST00000390498 PREX2Q70Z35 1606 aa0.29□□□□□ -2.36
TRAJ39-201ENST00000390498 ZNF292O60281 2723 aa0.29□□□□□ -2.36
TRAJ39-201ENST00000390498 LINC00158P58513 81 aa0.29□□□□□ -2.36
TRAJ39-201ENST00000390498 KRTAP4-1Q9BYQ7 146 aa0.29□□□□□ -2.36
TRAJ39-201ENST00000390498 LY75O60449 1722 aa0.29□□□□□ -2.36
TRAJ39-201ENST00000390498 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.29□□□□□ -2.36
TRAJ39-201ENST00000390498 LYNX1G3V0Z9 82 aa0.28□□□□□ -2.36
TRAJ39-201ENST00000390498 H0YAA0 97 aa0.28□□□□□ -2.36
TRAJ39-201ENST00000390498 PIEZO1Q92508 2521 aa0.28□□□□□ -2.36
TRAJ39-201ENST00000390498 EEA1Q15075 1411 aa0.28□□□□□ -2.37
TRAJ39-201ENST00000390498 KIAA0586Q9BVV6 1533 aa0.28□□□□□ -2.37
TRAJ39-201ENST00000390498 KIF1AQ12756 1690 aa0.27□□□□□ -2.37
TRAJ39-201ENST00000390498 TPRP12270 2363 aaKnown RBP0.27□□□□□ -2.37
TRAJ39-201ENST00000390498 K7EMI3 77 aa0.27□□□□□ -2.37
TRAJ39-201ENST00000390498 CRIP1P50238 77 aa0.27□□□□□ -2.37
TRAJ39-201ENST00000390498 F8P00451 2351 aa0.27□□□□□ -2.37
TRAJ39-201ENST00000390498 PRXQ9BXM0 1461 aa0.27□□□□□ -2.37
TRAJ39-201ENST00000390498 CSMD3Q7Z407 3707 aa0.27□□□□□ -2.37
TRAJ39-201ENST00000390498 TENM4Q6N022 2769 aa0.27□□□□□ -2.37
TRAJ39-201ENST00000390498 CNOT1A5YKK6 2376 aaKnown RBP0.26□□□□□ -2.37
TRAJ39-201ENST00000390498 SERF2P84101 59 aa0.26□□□□□ -2.37
TRAJ39-201ENST00000390498 CROCC2H7BZ55 1655 aa0.26□□□□□ -2.37
TRAJ39-201ENST00000390498 MUC16Q8WXI7 14507 aa0.25□□□□□ -2.37
TRAJ39-201ENST00000390498 CPS1P31327 1500 aa0.25□□□□□ -2.37
TRAJ39-201ENST00000390498 SYCP2Q9BX26 1530 aa0.25□□□□□ -2.37
TRAJ39-201ENST00000390498 LOC730098B7Z3J9 87 aa0.25□□□□□ -2.37
TRAJ39-201ENST00000390498 KRTAP21-1Q3LI58 79 aa0.25□□□□□ -2.37
TRAJ39-201ENST00000390498 SPTBN1Q01082 2364 aaKnown RBP0.25□□□□□ -2.37
TRAJ39-201ENST00000390498 PKDREJQ9NTG1 2253 aa0.25□□□□□ -2.37
TRAJ39-201ENST00000390498 VWFP04275 2813 aa0.24□□□□□ -2.37
TRAJ39-201ENST00000390498 UGGT1Q9NYU2 1555 aa0.24□□□□□ -2.37
TRAJ39-201ENST00000390498 M0R2T5 61 aa0.24□□□□□ -2.37
TRAJ39-201ENST00000390498 IAPPP10997 89 aa0.24□□□□□ -2.37
TRAJ39-201ENST00000390498 NCBP2-AS2Q69YL0 99 aa0.24□□□□□ -2.37
TRAJ39-201ENST00000390498 NMES1Q9C002 83 aa0.24□□□□□ -2.37
TRAJ39-201ENST00000390498 TNXBP22105 4242 aa0.24□□□□□ -2.37
TRAJ39-201ENST00000390498 GVINP1Q7Z2Y8 2422 aa0.23□□□□□ -2.37
TRAJ39-201ENST00000390498 AKAP6Q13023 2319 aa0.23□□□□□ -2.37
TRAJ39-201ENST00000390498 M0R1W7 72 aa0.23□□□□□ -2.37
TRAJ39-201ENST00000390498 DEFB130BP0DP73 79 aa0.23□□□□□ -2.37
TRAJ39-201ENST00000390498 DEFB130AP0DP74 79 aa0.23□□□□□ -2.37
TRAJ39-201ENST00000390498 FCER1GP30273 86 aa0.23□□□□□ -2.37
TRAJ39-201ENST00000390498 DEFB135Q30KP9 77 aa0.23□□□□□ -2.37
TRAJ39-201ENST00000390498 KRTAP5-10Q6L8G5 202 aa0.23□□□□□ -2.37
TRAJ39-201ENST00000390498 PRKDCP78527 4128 aaKnown RBP0.23□□□□□ -2.37
TRAJ39-201ENST00000390498 ITSN2Q9NZM3 1697 aa0.23□□□□□ -2.37
TRAJ39-201ENST00000390498 ADCY10Q96PN6 1610 aa0.23□□□□□ -2.37
TRAJ39-201ENST00000390498 CLASP1Q7Z460 1538 aa0.23□□□□□ -2.37
TRAJ39-201ENST00000390498 WNK2Q9Y3S1 2297 aa0.22□□□□□ -2.37
TRAJ39-201ENST00000390498 LRP1Q07954 4544 aaKnown RBP0.22□□□□□ -2.37
TRAJ39-201ENST00000390498 OTOGQ6ZRI0 2925 aa0.22□□□□□ -2.37
TRAJ39-201ENST00000390498 MROH2AA6NES4 1674 aa0.22□□□□□ -2.37
TRAJ39-201ENST00000390498 IGIPA6NJ69 53 aa0.22□□□□□ -2.37
TRAJ39-201ENST00000390498 PRM1P04553 51 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms