RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 LAMTOR3Q9UHA4 124 aa11.28□□□□□ -0.6
CNEP1R1-201ENST00000389134 HINT1P49773 126 aaPredicted RBP11.27□□□□□ -0.61
CNEP1R1-201ENST00000389134 IFI27L1Q96BM0 104 aa11.27□□□□□ -0.61
CNEP1R1-201ENST00000389134 TRAPPC1Q9Y5R8 145 aa11.26□□□□□ -0.61
CNEP1R1-201ENST00000389134 TMEM218A2RU14 115 aa11.25□□□□□ -0.61
CNEP1R1-201ENST00000389134 CFC1P0CG37 223 aa11.25□□□□□ -0.61
CNEP1R1-201ENST00000389134 COMMD7Q86VX2 200 aa11.25□□□□□ -0.61
CNEP1R1-201ENST00000389134 IFITM2Q01629 132 aa11.24□□□□□ -0.61
CNEP1R1-201ENST00000389134 Q5XG85 94 aa11.24□□□□□ -0.61
CNEP1R1-201ENST00000389134 CBY1Q9Y3M2 126 aa11.24□□□□□ -0.61
CNEP1R1-201ENST00000389134 C1orf195Q5TG92 126 aa11.22□□□□□ -0.61
CNEP1R1-201ENST00000389134 UQCC3Q6UW78 93 aa11.22□□□□□ -0.61
CNEP1R1-201ENST00000389134 TSPEAR-AS2P59090 65 aa11.21□□□□□ -0.61
CNEP1R1-201ENST00000389134 PRO1933Q9H354 126 aa11.21□□□□□ -0.61
CNEP1R1-201ENST00000389134 RPS10P5Q9NQ39 176 aa11.21□□□□□ -0.61
CNEP1R1-201ENST00000389134 H7C2G1 150 aa11.2□□□□□ -0.62
CNEP1R1-201ENST00000389134 LEPROTO15243 131 aa11.2□□□□□ -0.62
CNEP1R1-201ENST00000389134 DHRS4-AS1Q9P1J3 65 aa11.2□□□□□ -0.62
CNEP1R1-201ENST00000389134 FCGBPQ9Y6R7 5405 aaPredicted RBP11.19□□□□□ -0.62
CNEP1R1-201ENST00000389134 Q6Q795 121 aa11.18□□□□□ -0.62
CNEP1R1-201ENST00000389134 CLLU1Q5K131 121 aa11.17□□□□□ -0.62
CNEP1R1-201ENST00000389134 CHCHD1Q96BP2 118 aaKnown RBP11.16□□□□□ -0.62
CNEP1R1-201ENST00000389134 J3QQQ9 107 aa11.15□□□□□ -0.62
CNEP1R1-201ENST00000389134 NMUP48645 174 aa11.15□□□□□ -0.62
CNEP1R1-201ENST00000389134 Q1RN00 199 aa11.15□□□□□ -0.62
CNEP1R1-201ENST00000389134 SOSTDC1Q6X4U4 206 aa11.14□□□□□ -0.63
CNEP1R1-201ENST00000389134 AKR1D1P51857 326 aa11.13□□□□□ -0.63
CNEP1R1-201ENST00000389134 RHEBQ15382 184 aa11.13□□□□□ -0.63
CNEP1R1-201ENST00000389134 TAL2Q16559 108 aa11.13□□□□□ -0.63
CNEP1R1-201ENST00000389134 SMIM29Q86T20 159 aa11.13□□□□□ -0.63
CNEP1R1-201ENST00000389134 KRTAP9-8Q9BYQ0 159 aa11.13□□□□□ -0.63
CNEP1R1-201ENST00000389134 EIF4EBP3O60516 100 aaPredicted RBP11.11□□□□□ -0.63
CNEP1R1-201ENST00000389134 NPC2P61916 151 aa11.11□□□□□ -0.63
CNEP1R1-201ENST00000389134 LGALS3P17931 250 aaKnown RBP11.1□□□□□ -0.63
CNEP1R1-201ENST00000389134 TEX49A0A1B0GTD5 131 aa11.09□□□□□ -0.63
CNEP1R1-201ENST00000389134 H0Y8G0 127 aa11.09□□□□□ -0.63
CNEP1R1-201ENST00000389134 DEFB105AQ8NG35 78 aa11.09□□□□□ -0.63
CNEP1R1-201ENST00000389134 HERVK_113P61574 105 aa11.08□□□□□ -0.64
CNEP1R1-201ENST00000389134 OR13C6PQ8NH95 151 aa11.08□□□□□ -0.64
CNEP1R1-201ENST00000389134 PLNP26678 52 aa11.07□□□□□ -0.64
CNEP1R1-201ENST00000389134 ADAMTSL4-AS1Q5T5F5 129 aa11.07□□□□□ -0.64
CNEP1R1-201ENST00000389134 ELOF1P60002 83 aaKnown RBP11.06□□□□□ -0.64
CNEP1R1-201ENST00000389134 COX7BP24311 80 aa11.05□□□□□ -0.64
CNEP1R1-201ENST00000389134 C10orf91Q5T1B1 145 aa11.04□□□□□ -0.64
CNEP1R1-201ENST00000389134 ATP11AUNQ6ZP68 121 aa11.04□□□□□ -0.64
CNEP1R1-201ENST00000389134 SPANXCQ9NY87 97 aa11.04□□□□□ -0.64
CNEP1R1-201ENST00000389134 TCL1BO95988 128 aa11.03□□□□□ -0.64
CNEP1R1-201ENST00000389134 A0A0J9YXY3 114 aa11.02□□□□□ -0.65
CNEP1R1-201ENST00000389134 HSBP1O75506 76 aa11.02□□□□□ -0.65
CNEP1R1-201ENST00000389134 A0A0G2JQZ4 141 aa11.01□□□□□ -0.65
CNEP1R1-201ENST00000389134 SPANXDQ9BXN6 97 aa11.01□□□□□ -0.65
CNEP1R1-201ENST00000389134 C6orf99Q4VX62 202 aa11□□□□□ -0.65
CNEP1R1-201ENST00000389134 KRTAP19-1Q8IUB9 90 aa11□□□□□ -0.65
CNEP1R1-201ENST00000389134 C20orf202A1L168 122 aa10.99□□□□□ -0.65
CNEP1R1-201ENST00000389134 DPM2O94777 84 aa10.99□□□□□ -0.65
CNEP1R1-201ENST00000389134 Q75L30 129 aa10.98□□□□□ -0.65
CNEP1R1-201ENST00000389134 LINC00308Q8TCZ7 52 aa10.98□□□□□ -0.65
CNEP1R1-201ENST00000389134 LEPROTL1O95214 131 aa10.97□□□□□ -0.65
CNEP1R1-201ENST00000389134 IGKCP01834 107 aa10.96□□□□□ -0.65
CNEP1R1-201ENST00000389134 IGLV5-48A0A075B6I7 105 aa10.95□□□□□ -0.66
CNEP1R1-201ENST00000389134 SYNE2Q8WXH0 6885 aaKnown RBP10.93□□□□□ -0.66
CNEP1R1-201ENST00000389134 TRBV7-6A0A0J9YX20 115 aa10.93□□□□□ -0.66
CNEP1R1-201ENST00000389134 PCP2Q8IVA1 136 aa10.93□□□□□ -0.66
CNEP1R1-201ENST00000389134 LINC00518Q8N0U6 118 aa10.93□□□□□ -0.66
CNEP1R1-201ENST00000389134 PMCHL2Q9BQD1 86 aa10.93□□□□□ -0.66
CNEP1R1-201ENST00000389134 LITAFQ99732 161 aa10.91□□□□□ -0.66
CNEP1R1-201ENST00000389134 MACF1Q9UPN3 7388 aaKnown RBP10.9□□□□□ -0.66
CNEP1R1-201ENST00000389134 E9PLD3 99 aa10.9□□□□□ -0.66
CNEP1R1-201ENST00000389134 OBSCN-AS1Q96MR7 158 aa10.9□□□□□ -0.66
CNEP1R1-201ENST00000389134 LCE2BO14633 110 aa10.89□□□□□ -0.67
CNEP1R1-201ENST00000389134 TIMM17BO60830 172 aa10.89□□□□□ -0.67
CNEP1R1-201ENST00000389134 MT2AP02795 61 aa10.89□□□□□ -0.67
CNEP1R1-201ENST00000389134 HSPB8Q9UJY1 196 aa10.89□□□□□ -0.67
CNEP1R1-201ENST00000389134 A0A1B0GWB2 263 aa10.88□□□□□ -0.67
CNEP1R1-201ENST00000389134 TRBV20-1A0A075B6N2 111 aa10.86□□□□□ -0.67
CNEP1R1-201ENST00000389134 FABP4P15090 132 aa10.84□□□□□ -0.67
CNEP1R1-201ENST00000389134 SERF1AO75920 110 aa10.83□□□□□ -0.68
CNEP1R1-201ENST00000389134 SNAPINO95295 136 aa10.82□□□□□ -0.68
CNEP1R1-201ENST00000389134 YPEL4Q96NS1 127 aa10.82□□□□□ -0.68
CNEP1R1-201ENST00000389134 APOC3P02656 99 aa10.81□□□□□ -0.68
CNEP1R1-201ENST00000389134 A4D1N5 150 aa10.8□□□□□ -0.68
CNEP1R1-201ENST00000389134 F8WEM9 126 aa10.8□□□□□ -0.68
CNEP1R1-201ENST00000389134 MT1FP04733 61 aa10.8□□□□□ -0.68
CNEP1R1-201ENST00000389134 LINC00310P59036 64 aa10.8□□□□□ -0.68
CNEP1R1-201ENST00000389134 KRTAP9-3Q9BYQ3 159 aa10.8□□□□□ -0.68
CNEP1R1-201ENST00000389134 LINC00846Q9NV44 126 aa10.8□□□□□ -0.68
CNEP1R1-201ENST00000389134 NHP2Q9NX24 153 aaKnown RBP10.79□□□□□ -0.68
CNEP1R1-201ENST00000389134 TRBV7-7A0A0K0K1E9 115 aa10.78□□□□□ -0.68
CNEP1R1-201ENST00000389134 SVBPQ8N300 66 aa10.78□□□□□ -0.68
CNEP1R1-201ENST00000389134 Q96NJ1 140 aa10.78□□□□□ -0.68
CNEP1R1-201ENST00000389134 ZNF815PA8K554 130 aa10.75□□□□□ -0.69
CNEP1R1-201ENST00000389134 KRTAP10-10P60014 251 aa10.75□□□□□ -0.69
CNEP1R1-201ENST00000389134 NDUFA5Q16718 116 aa10.75□□□□□ -0.69
CNEP1R1-201ENST00000389134 Q6JHZ5 121 aa10.75□□□□□ -0.69
CNEP1R1-201ENST00000389134 A6NDN8 102 aa10.73□□□□□ -0.69
CNEP1R1-201ENST00000389134 CLEC2BQ92478 149 aa10.73□□□□□ -0.69
CNEP1R1-201ENST00000389134 C20orf166-AS1Q96NR2 134 aa10.73□□□□□ -0.69
CNEP1R1-201ENST00000389134 TRGC2P03986 189 aa10.72□□□□□ -0.69
CNEP1R1-201ENST00000389134 A8MUU9 505 aa10.7□□□□□ -0.7
CNEP1R1-201ENST00000389134 IGFL1Q6UW32 110 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms