RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 ZNF292O60281 2723 aa8.5□□□□□ -1.05
SRGAP3-202ENST00000383836 OXLD1Q5BKU9 147 aa8.5□□□□□ -1.05
SRGAP3-202ENST00000383836 C10orf142B7Z368 130 aa8.5□□□□□ -1.05
SRGAP3-202ENST00000383836 COX6B2Q6YFQ2 88 aa8.49□□□□□ -1.05
SRGAP3-202ENST00000383836 TRANK1O15050 2925 aa8.49□□□□□ -1.05
SRGAP3-202ENST00000383836 ITPR2Q14571 2701 aa8.49□□□□□ -1.05
SRGAP3-202ENST00000383836 C16orf95Q9H693 158 aa8.46□□□□□ -1.05
SRGAP3-202ENST00000383836 CDSNQ15517 529 aa8.46□□□□□ -1.06
SRGAP3-202ENST00000383836 DMBT1Q9UGM3 2413 aaPredicted RBP8.45□□□□□ -1.06
SRGAP3-202ENST00000383836 SPACA4Q8TDM5 124 aa8.44□□□□□ -1.06
SRGAP3-202ENST00000383836 CRIPTQ9P021 101 aa8.44□□□□□ -1.06
SRGAP3-202ENST00000383836 C16orf90A8MZG2 172 aa8.44□□□□□ -1.06
SRGAP3-202ENST00000383836 ST20-AS1Q8NBB2 130 aa8.44□□□□□ -1.06
SRGAP3-202ENST00000383836 GVQW2A0A096LPI5 108 aaPredicted RBP8.43□□□□□ -1.06
SRGAP3-202ENST00000383836 EPM2AB3EWF7 344 aa8.42□□□□□ -1.06
SRGAP3-202ENST00000383836 TEP1Q99973 2627 aaKnown RBP8.41□□□□□ -1.06
SRGAP3-202ENST00000383836 CDC42SE1Q9NRR8 79 aa8.41□□□□□ -1.06
SRGAP3-202ENST00000383836 MRPL34Q9BQ48 92 aaKnown RBP8.4□□□□□ -1.06
SRGAP3-202ENST00000383836 APCP25054 2843 aa8.4□□□□□ -1.07
SRGAP3-202ENST00000383836 A0A0C4DFX4 3053 aa8.39□□□□□ -1.07
SRGAP3-202ENST00000383836 Q1T7F1 81 aa8.38□□□□□ -1.07
SRGAP3-202ENST00000383836 SPANXA2-OT1Q8N9U9 137 aa8.38□□□□□ -1.07
SRGAP3-202ENST00000383836 H3BNG1 76 aa8.38□□□□□ -1.07
SRGAP3-202ENST00000383836 CEP350Q5VT06 3117 aa8.37□□□□□ -1.07
SRGAP3-202ENST00000383836 SMR3AQ99954 134 aa8.37□□□□□ -1.07
SRGAP3-202ENST00000383836 Q6ZRP5 223 aa8.35□□□□□ -1.07
SRGAP3-202ENST00000383836 PHF5AQ7RTV0 110 aaKnown RBP8.35□□□□□ -1.07
SRGAP3-202ENST00000383836 TYMSOSQ8TAI1 123 aa8.35□□□□□ -1.07
SRGAP3-202ENST00000383836 KLK9Q2XQG4 91 aa8.34□□□□□ -1.07
SRGAP3-202ENST00000383836 EIF4EBP3O60516 100 aaPredicted RBP8.32□□□□□ -1.08
SRGAP3-202ENST00000383836 KCNQ1DNQ9H478 68 aa8.32□□□□□ -1.08
SRGAP3-202ENST00000383836 LINC00528Q8N1L1 170 aa8.32□□□□□ -1.08
SRGAP3-202ENST00000383836 UTP20O75691 2785 aaKnown RBP8.32□□□□□ -1.08
SRGAP3-202ENST00000383836 Q96NJ1 140 aa8.32□□□□□ -1.08
SRGAP3-202ENST00000383836 ITPR1Q14643 2758 aa8.32□□□□□ -1.08
SRGAP3-202ENST00000383836 LAMA2P24043 3122 aaKnown RBP8.31□□□□□ -1.08
SRGAP3-202ENST00000383836 CHTF8P0CG12 524 aa8.31□□□□□ -1.08
SRGAP3-202ENST00000383836 IGFL1Q6UW32 110 aa8.31□□□□□ -1.08
SRGAP3-202ENST00000383836 A0A1W2PPR1 153 aa8.3□□□□□ -1.08
SRGAP3-202ENST00000383836 RBM12B-AS1Q9P1G2 102 aa8.3□□□□□ -1.08
SRGAP3-202ENST00000383836 APLNQ9ULZ1 77 aa8.3□□□□□ -1.08
SRGAP3-202ENST00000383836 SETXQ7Z333 2677 aaKnown RBP8.3□□□□□ -1.08
SRGAP3-202ENST00000383836 GOLGB1Q14789 3259 aaKnown RBP8.29□□□□□ -1.08
SRGAP3-202ENST00000383836 FAM168BA1KXE4 195 aa8.29□□□□□ -1.08
SRGAP3-202ENST00000383836 C8orf17Q9NRJ1 99 aa8.28□□□□□ -1.08
SRGAP3-202ENST00000383836 PCNTO95613 3336 aa8.28□□□□□ -1.08
SRGAP3-202ENST00000383836 IGLV1-50A0A075B6I6 118 aa8.27□□□□□ -1.09
SRGAP3-202ENST00000383836 A0A1B0GVX0 72 aa8.27□□□□□ -1.09
SRGAP3-202ENST00000383836 Q8N377 158 aa8.26□□□□□ -1.09
SRGAP3-202ENST00000383836 CFAP54Q96N23 3096 aa8.26□□□□□ -1.09
SRGAP3-202ENST00000383836 H3BS24 57 aa8.25□□□□□ -1.09
SRGAP3-202ENST00000383836 DSPP15924 2871 aaKnown RBP8.25□□□□□ -1.09
SRGAP3-202ENST00000383836 C9orf129Q5T035 196 aaKnown RBP8.25□□□□□ -1.09
SRGAP3-202ENST00000383836 NSD1Q96L73 2696 aaPredicted RBP8.24□□□□□ -1.09
SRGAP3-202ENST00000383836 OBSCN-AS1Q96MR7 158 aa8.24□□□□□ -1.09
SRGAP3-202ENST00000383836 Q5XG85 94 aa8.22□□□□□ -1.09
SRGAP3-202ENST00000383836 KRTAP10-9P60411 292 aa8.22□□□□□ -1.09
SRGAP3-202ENST00000383836 Q75L30 129 aa8.21□□□□□ -1.09
SRGAP3-202ENST00000383836 OCR1Q9BZK8 76 aa8.21□□□□□ -1.1
SRGAP3-202ENST00000383836 DNAH10OSP0CZ25 163 aa8.2□□□□□ -1.1
SRGAP3-202ENST00000383836 LUZP6Q538Z0 58 aa8.2□□□□□ -1.1
SRGAP3-202ENST00000383836 PRO3102Q9H379 93 aa8.19□□□□□ -1.1
SRGAP3-202ENST00000383836 Q8NAQ8 132 aa8.19□□□□□ -1.1
SRGAP3-202ENST00000383836 DSCR10P59022 87 aa8.19□□□□□ -1.1
SRGAP3-202ENST00000383836 RTL8CO15255 209 aa8.19□□□□□ -1.1
SRGAP3-202ENST00000383836 WWC2-AS2Q96NR7 200 aa8.18□□□□□ -1.1
SRGAP3-202ENST00000383836 LINC01554Q52M75 96 aa8.17□□□□□ -1.1
SRGAP3-202ENST00000383836 FAM104AQ969W3 186 aa8.17□□□□□ -1.1
SRGAP3-202ENST00000383836 C5orf42Q9H799 3197 aa8.17□□□□□ -1.1
SRGAP3-202ENST00000383836 LINC00588Q9Y4M8 146 aa8.17□□□□□ -1.1
SRGAP3-202ENST00000383836 FRYLO94915 3013 aa8.15□□□□□ -1.1
SRGAP3-202ENST00000383836 PLA2G2DQ9UNK4 145 aa8.14□□□□□ -1.11
SRGAP3-202ENST00000383836 FAM229BQ4G0N7 80 aa8.13□□□□□ -1.11
SRGAP3-202ENST00000383836 PRR34Q9NV39 138 aa8.12□□□□□ -1.11
SRGAP3-202ENST00000383836 C15orf56Q8N910 161 aa8.12□□□□□ -1.11
SRGAP3-202ENST00000383836 NBDYA0A0U1RRE5 68 aa8.11□□□□□ -1.11
SRGAP3-202ENST00000383836 CSNK1G2-AS1Q8NCQ2 148 aa8.1□□□□□ -1.11
SRGAP3-202ENST00000383836 VPS13AQ96RL7 3174 aa8.1□□□□□ -1.11
SRGAP3-202ENST00000383836 A0A0G2JQZ4 141 aa8.1□□□□□ -1.11
SRGAP3-202ENST00000383836 A0A1W2PNN7 141 aa8.1□□□□□ -1.11
SRGAP3-202ENST00000383836 FP248Q71RG6 208 aaPredicted RBP8.1□□□□□ -1.11
SRGAP3-202ENST00000383836 A0A1W2PNM2 257 aa8.09□□□□□ -1.11
SRGAP3-202ENST00000383836 M0R2T5 61 aa8.09□□□□□ -1.11
SRGAP3-202ENST00000383836 TLX1NBP0CAT3 122 aa8.09□□□□□ -1.11
SRGAP3-202ENST00000383836 IGLV7-46A0A075B6I9 117 aa8.08□□□□□ -1.12
SRGAP3-202ENST00000383836 IGLV5-48A0A075B6I7 105 aa8.08□□□□□ -1.12
SRGAP3-202ENST00000383836 A0A0D9SG42 100 aa8.08□□□□□ -1.12
SRGAP3-202ENST00000383836 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
SRGAP3-202ENST00000383836 FLNCQ14315 2725 aa8.06□□□□□ -1.12
SRGAP3-202ENST00000383836 CHD9Q3L8U1 2897 aa8.05□□□□□ -1.12
SRGAP3-202ENST00000383836 ZNF861PO60384 105 aa8.05□□□□□ -1.12
SRGAP3-202ENST00000383836 NBEAL2Q6ZNJ1 2754 aa8.05□□□□□ -1.12
SRGAP3-202ENST00000383836 CYSTM1Q9H1C7 97 aa8.04□□□□□ -1.12
SRGAP3-202ENST00000383836 PRR26Q8N8Z3 221 aa8.03□□□□□ -1.12
SRGAP3-202ENST00000383836 Q8N9P0 234 aaPredicted RBP8.03□□□□□ -1.12
SRGAP3-202ENST00000383836 LINC00304Q8N9R0 145 aa8.03□□□□□ -1.12
SRGAP3-202ENST00000383836 Q5VV11 94 aa8.01□□□□□ -1.13
SRGAP3-202ENST00000383836 SPRR4Q96PI1 79 aa8.01□□□□□ -1.13
SRGAP3-202ENST00000383836 UTRNP46939 3433 aa8.01□□□□□ -1.13
SRGAP3-202ENST00000383836 Q8N1X5 172 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms