RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 IGFL3Q6UXB1 125 aa3.15□□□□□ -1.9
PTCD2-202ENST00000380639 C19orf73Q9NVV2 129 aa3.15□□□□□ -1.9
PTCD2-202ENST00000380639 PHF5AQ7RTV0 110 aaKnown RBP3.15□□□□□ -1.91
PTCD2-202ENST00000380639 KRTAP24-1Q3LI83 254 aa3.15□□□□□ -1.91
PTCD2-202ENST00000380639 SHANK3Q9BYB0 1731 aa3.15□□□□□ -1.91
PTCD2-202ENST00000380639 C16orf95Q9H693 158 aa3.15□□□□□ -1.91
PTCD2-202ENST00000380639 RPL37P61927 97 aaKnown RBP3.14□□□□□ -1.91
PTCD2-202ENST00000380639 ADM2Q7Z4H4 148 aa3.14□□□□□ -1.91
PTCD2-202ENST00000380639 NRXN2Q9P2S2 1712 aa3.14□□□□□ -1.91
PTCD2-202ENST00000380639 A0A1W2PNU3 283 aaPredicted RBP3.14□□□□□ -1.91
PTCD2-202ENST00000380639 C10orf95Q9H7T3 257 aa3.14□□□□□ -1.91
PTCD2-202ENST00000380639 M0R2T5 61 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 S4R3F8 94 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 COL5A3P25940 1745 aaPredicted RBP3.13□□□□□ -1.91
PTCD2-202ENST00000380639 H3BNG1 76 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 BRWD1-AS2P59051 145 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 A0A096LNJ9 63 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 WDR90Q96KV7 1748 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 NOTCH2Q04721 2471 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 BRI3O95415 125 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 FHL3Q13643 280 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 LMO4P61968 165 aa3.12□□□□□ -1.91
PTCD2-202ENST00000380639 Q8NA96 180 aa3.12□□□□□ -1.91
PTCD2-202ENST00000380639 R4GN34 69 aa3.11□□□□□ -1.91
PTCD2-202ENST00000380639 LITAFQ99732 161 aa3.11□□□□□ -1.91
PTCD2-202ENST00000380639 LRRK2Q5S007 2527 aa3.11□□□□□ -1.91
PTCD2-202ENST00000380639 JMJD1CQ15652 2540 aa3.11□□□□□ -1.91
PTCD2-202ENST00000380639 NHSL1Q5SYE7 1610 aa3.11□□□□□ -1.91
PTCD2-202ENST00000380639 Q8NDZ9 215 aa3.11□□□□□ -1.91
PTCD2-202ENST00000380639 CNFNQ9BYD5 112 aa3.1□□□□□ -1.91
PTCD2-202ENST00000380639 TLN1Q9Y490 2541 aaKnown RBP3.1□□□□□ -1.91
PTCD2-202ENST00000380639 IGFL1Q6UW32 110 aa3.1□□□□□ -1.91
PTCD2-202ENST00000380639 URB1-AS1Q96HZ7 61 aa3.1□□□□□ -1.91
PTCD2-202ENST00000380639 A0A0G2JQZ4 141 aa3.09□□□□□ -1.92
PTCD2-202ENST00000380639 COL4A5P29400 1685 aa3.09□□□□□ -1.92
PTCD2-202ENST00000380639 THSD7BQ9C0I4 1608 aa3.08□□□□□ -1.92
PTCD2-202ENST00000380639 COL18A1P39060 1754 aa3.08□□□□□ -1.92
PTCD2-202ENST00000380639 MTORP42345 2549 aa3.08□□□□□ -1.92
PTCD2-202ENST00000380639 Q8N377 158 aa3.07□□□□□ -1.92
PTCD2-202ENST00000380639 LTBP1Q14766 1721 aa3.07□□□□□ -1.92
PTCD2-202ENST00000380639 C1orf229Q6ZS94 237 aaPredicted RBP3.07□□□□□ -1.92
PTCD2-202ENST00000380639 ANKHD1Q8IWZ3 2542 aaKnown RBP3.07□□□□□ -1.92
PTCD2-202ENST00000380639 ZCCHC13Q8WW36 166 aaKnown RBP3.07□□□□□ -1.92
PTCD2-202ENST00000380639 Q6ZSN1 163 aa3.06□□□□□ -1.92
PTCD2-202ENST00000380639 COL4A1P02462 1669 aa3.06□□□□□ -1.92
PTCD2-202ENST00000380639 J3QKU1 62 aa3.06□□□□□ -1.92
PTCD2-202ENST00000380639 Q6ZSA8 131 aa3.05□□□□□ -1.92
PTCD2-202ENST00000380639 M0QZ58 72 aa3.05□□□□□ -1.92
PTCD2-202ENST00000380639 GVQW2A0A096LPI5 108 aaPredicted RBP3.05□□□□□ -1.92
PTCD2-202ENST00000380639 CASC10Q5T4H9 136 aa3.04□□□□□ -1.92
PTCD2-202ENST00000380639 FAM168BA1KXE4 195 aa3.04□□□□□ -1.92
PTCD2-202ENST00000380639 KCNQ1DNQ9H478 68 aa3.04□□□□□ -1.92
PTCD2-202ENST00000380639 PRR34Q9NV39 138 aa3.04□□□□□ -1.92
PTCD2-202ENST00000380639 COL27A1Q8IZC6 1860 aaPredicted RBP3.03□□□□□ -1.92
PTCD2-202ENST00000380639 CNBPP62633 177 aaKnown RBP3.02□□□□□ -1.93
PTCD2-202ENST00000380639 ZFHX2Q9C0A1 2572 aaPredicted RBP3.02□□□□□ -1.93
PTCD2-202ENST00000380639 A6NN06 94 aa3.02□□□□□ -1.93
PTCD2-202ENST00000380639 LINC01546A6NGU7 62 aa3.01□□□□□ -1.93
PTCD2-202ENST00000380639 COL11A2P13942 1736 aaPredicted RBP3.01□□□□□ -1.93
PTCD2-202ENST00000380639 ZNF861PO60384 105 aa3.01□□□□□ -1.93
PTCD2-202ENST00000380639 WISP2O76076 250 aa3.01□□□□□ -1.93
PTCD2-202ENST00000380639 CHD8Q9HCK8 2581 aa3□□□□□ -1.93
PTCD2-202ENST00000380639 CRIP3Q6Q6R5 217 aa2.99□□□□□ -1.93
PTCD2-202ENST00000380639 SPRR4Q96PI1 79 aa2.98□□□□□ -1.93
PTCD2-202ENST00000380639 SPTBN4Q9H254 2564 aa2.98□□□□□ -1.93
PTCD2-202ENST00000380639 ANAPC11Q9NYG5 84 aa2.97□□□□□ -1.93
PTCD2-202ENST00000380639 OXTP01178 125 aa2.97□□□□□ -1.93
PTCD2-202ENST00000380639 HELZ2Q9BYK8 2649 aaKnown RBP2.96□□□□□ -1.94
PTCD2-202ENST00000380639 A8MUU9 505 aa2.96□□□□□ -1.94
PTCD2-202ENST00000380639 U3KQA8 63 aa2.96□□□□□ -1.94
PTCD2-202ENST00000380639 PCNTO95613 3336 aa2.96□□□□□ -1.94
PTCD2-202ENST00000380639 CYSTM1Q9H1C7 97 aa2.95□□□□□ -1.94
PTCD2-202ENST00000380639 COL4A6Q14031 1691 aa2.94□□□□□ -1.94
PTCD2-202ENST00000380639 USP9XQ93008 2570 aaPredicted RBP2.93□□□□□ -1.94
PTCD2-202ENST00000380639 A0A1W2PPR1 153 aa2.93□□□□□ -1.94
PTCD2-202ENST00000380639 HECTD1Q9ULT8 2610 aa2.93□□□□□ -1.94
PTCD2-202ENST00000380639 Q5W150 140 aa2.93□□□□□ -1.94
PTCD2-202ENST00000380639 BPTFQ12830 3046 aa2.92□□□□□ -1.94
PTCD2-202ENST00000380639 LINC00612Q8N6U2 182 aa2.91□□□□□ -1.94
PTCD2-202ENST00000380639 NBDYA0A0U1RRE5 68 aa2.91□□□□□ -1.94
PTCD2-202ENST00000380639 PANO1I0J062 215 aa2.9□□□□□ -1.94
PTCD2-202ENST00000380639 TNP1P09430 55 aa2.9□□□□□ -1.94
PTCD2-202ENST00000380639 BAHCC1Q9P281 2608 aa2.9□□□□□ -1.95
PTCD2-202ENST00000380639 A8MU10 97 aa2.9□□□□□ -1.95
PTCD2-202ENST00000380639 LTBP2Q14767 1821 aa2.9□□□□□ -1.95
PTCD2-202ENST00000380639 KRTAP4-16G5E9R7 235 aaPredicted RBP2.89□□□□□ -1.95
PTCD2-202ENST00000380639 SPRR1BP22528 89 aa2.89□□□□□ -1.95
PTCD2-202ENST00000380639 SMR3BP02814 79 aaPredicted RBP2.88□□□□□ -1.95
PTCD2-202ENST00000380639 Q5VSD8 79 aa2.88□□□□□ -1.95
PTCD2-202ENST00000380639 KRTAP26-1Q6PEX3 210 aa2.88□□□□□ -1.95
PTCD2-202ENST00000380639 SETD2Q9BYW2 2564 aaPredicted RBP2.87□□□□□ -1.95
PTCD2-202ENST00000380639 MMP24-AS1A0A0U1RRL7 71 aa2.87□□□□□ -1.95
PTCD2-202ENST00000380639 FASNP49327 2511 aaKnown RBP2.86□□□□□ -1.95
PTCD2-202ENST00000380639 STAB1Q9NY15 2570 aa2.86□□□□□ -1.95
PTCD2-202ENST00000380639 KRTAP11-1Q8IUC1 163 aa2.85□□□□□ -1.95
PTCD2-202ENST00000380639 NOTCH1P46531 2555 aa2.85□□□□□ -1.95
PTCD2-202ENST00000380639 Q6ZPA2 131 aa2.85□□□□□ -1.95
PTCD2-202ENST00000380639 ANKRD17O75179 2603 aaKnown RBP2.84□□□□□ -1.95
PTCD2-202ENST00000380639 KRTAP23-1A1A580 65 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms