RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 IGFL3Q6UXB1 125 aa3.15□□□□□ -1.9
PTCD2-202ENST00000380639 C19orf73Q9NVV2 129 aa3.15□□□□□ -1.9
PTCD2-202ENST00000380639 PHF5AQ7RTV0 110 aaKnown RBP3.15□□□□□ -1.91
PTCD2-202ENST00000380639 KRTAP24-1Q3LI83 254 aa3.15□□□□□ -1.91
PTCD2-202ENST00000380639 SHANK3Q9BYB0 1731 aa3.15□□□□□ -1.91
PTCD2-202ENST00000380639 C16orf95Q9H693 158 aa3.15□□□□□ -1.91
PTCD2-202ENST00000380639 RPL37P61927 97 aaKnown RBP3.14□□□□□ -1.91
PTCD2-202ENST00000380639 ADM2Q7Z4H4 148 aa3.14□□□□□ -1.91
PTCD2-202ENST00000380639 NRXN2Q9P2S2 1712 aa3.14□□□□□ -1.91
PTCD2-202ENST00000380639 A0A1W2PNU3 283 aaPredicted RBP3.14□□□□□ -1.91
PTCD2-202ENST00000380639 C10orf95Q9H7T3 257 aa3.14□□□□□ -1.91
PTCD2-202ENST00000380639 M0R2T5 61 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 S4R3F8 94 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 COL5A3P25940 1745 aaPredicted RBP3.13□□□□□ -1.91
PTCD2-202ENST00000380639 H3BNG1 76 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 BRWD1-AS2P59051 145 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 A0A096LNJ9 63 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 WDR90Q96KV7 1748 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 NOTCH2Q04721 2471 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 BRI3O95415 125 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 FHL3Q13643 280 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
PTCD2-202ENST00000380639 LMO4P61968 165 aa3.12□□□□□ -1.91
PTCD2-202ENST00000380639 Q8NA96 180 aa3.12□□□□□ -1.91
PTCD2-202ENST00000380639 R4GN34 69 aa3.11□□□□□ -1.91
PTCD2-202ENST00000380639 LITAFQ99732 161 aa3.11□□□□□ -1.91
PTCD2-202ENST00000380639 LRRK2Q5S007 2527 aa3.11□□□□□ -1.91
PTCD2-202ENST00000380639 JMJD1CQ15652 2540 aa3.11□□□□□ -1.91
PTCD2-202ENST00000380639 NHSL1Q5SYE7 1610 aa3.11□□□□□ -1.91
PTCD2-202ENST00000380639 Q8NDZ9 215 aa3.11□□□□□ -1.91
PTCD2-202ENST00000380639 CNFNQ9BYD5 112 aa3.1□□□□□ -1.91
PTCD2-202ENST00000380639 TLN1Q9Y490 2541 aaKnown RBP3.1□□□□□ -1.91
PTCD2-202ENST00000380639 IGFL1Q6UW32 110 aa3.1□□□□□ -1.91
PTCD2-202ENST00000380639 URB1-AS1Q96HZ7 61 aa3.1□□□□□ -1.91
PTCD2-202ENST00000380639 A0A0G2JQZ4 141 aa3.09□□□□□ -1.92
PTCD2-202ENST00000380639 COL4A5P29400 1685 aa3.09□□□□□ -1.92
PTCD2-202ENST00000380639 THSD7BQ9C0I4 1608 aa3.08□□□□□ -1.92
PTCD2-202ENST00000380639 COL18A1P39060 1754 aa3.08□□□□□ -1.92
PTCD2-202ENST00000380639 MTORP42345 2549 aa3.08□□□□□ -1.92
PTCD2-202ENST00000380639 Q8N377 158 aa3.07□□□□□ -1.92
PTCD2-202ENST00000380639 LTBP1Q14766 1721 aa3.07□□□□□ -1.92
PTCD2-202ENST00000380639 C1orf229Q6ZS94 237 aaPredicted RBP3.07□□□□□ -1.92
PTCD2-202ENST00000380639 ANKHD1Q8IWZ3 2542 aaKnown RBP3.07□□□□□ -1.92
PTCD2-202ENST00000380639 ZCCHC13Q8WW36 166 aaKnown RBP3.07□□□□□ -1.92
PTCD2-202ENST00000380639 Q6ZSN1 163 aa3.06□□□□□ -1.92
PTCD2-202ENST00000380639 COL4A1P02462 1669 aa3.06□□□□□ -1.92
PTCD2-202ENST00000380639 J3QKU1 62 aa3.06□□□□□ -1.92
PTCD2-202ENST00000380639 Q6ZSA8 131 aa3.05□□□□□ -1.92
PTCD2-202ENST00000380639 M0QZ58 72 aa3.05□□□□□ -1.92
PTCD2-202ENST00000380639 GVQW2A0A096LPI5 108 aaPredicted RBP3.05□□□□□ -1.92
PTCD2-202ENST00000380639 CASC10Q5T4H9 136 aa3.04□□□□□ -1.92
PTCD2-202ENST00000380639 FAM168BA1KXE4 195 aa3.04□□□□□ -1.92
PTCD2-202ENST00000380639 KCNQ1DNQ9H478 68 aa3.04□□□□□ -1.92
PTCD2-202ENST00000380639 PRR34Q9NV39 138 aa3.04□□□□□ -1.92
PTCD2-202ENST00000380639 COL27A1Q8IZC6 1860 aaPredicted RBP3.03□□□□□ -1.92
PTCD2-202ENST00000380639 CNBPP62633 177 aaKnown RBP3.02□□□□□ -1.93
PTCD2-202ENST00000380639 ZFHX2Q9C0A1 2572 aaPredicted RBP3.02□□□□□ -1.93
PTCD2-202ENST00000380639 A6NN06 94 aa3.02□□□□□ -1.93
PTCD2-202ENST00000380639 LINC01546A6NGU7 62 aa3.01□□□□□ -1.93
PTCD2-202ENST00000380639 COL11A2P13942 1736 aaPredicted RBP3.01□□□□□ -1.93
PTCD2-202ENST00000380639 ZNF861PO60384 105 aa3.01□□□□□ -1.93
PTCD2-202ENST00000380639 WISP2O76076 250 aa3.01□□□□□ -1.93
PTCD2-202ENST00000380639 CHD8Q9HCK8 2581 aa3□□□□□ -1.93
PTCD2-202ENST00000380639 CRIP3Q6Q6R5 217 aa2.99□□□□□ -1.93
PTCD2-202ENST00000380639 SPRR4Q96PI1 79 aa2.98□□□□□ -1.93
PTCD2-202ENST00000380639 SPTBN4Q9H254 2564 aa2.98□□□□□ -1.93
PTCD2-202ENST00000380639 ANAPC11Q9NYG5 84 aa2.97□□□□□ -1.93
PTCD2-202ENST00000380639 OXTP01178 125 aa2.97□□□□□ -1.93
PTCD2-202ENST00000380639 HELZ2Q9BYK8 2649 aaKnown RBP2.96□□□□□ -1.94
PTCD2-202ENST00000380639 A8MUU9 505 aa2.96□□□□□ -1.94
PTCD2-202ENST00000380639 U3KQA8 63 aa2.96□□□□□ -1.94
PTCD2-202ENST00000380639 PCNTO95613 3336 aa2.96□□□□□ -1.94
PTCD2-202ENST00000380639 CYSTM1Q9H1C7 97 aa2.95□□□□□ -1.94
PTCD2-202ENST00000380639 COL4A6Q14031 1691 aa2.94□□□□□ -1.94
PTCD2-202ENST00000380639 USP9XQ93008 2570 aaPredicted RBP2.93□□□□□ -1.94
PTCD2-202ENST00000380639 A0A1W2PPR1 153 aa2.93□□□□□ -1.94
PTCD2-202ENST00000380639 HECTD1Q9ULT8 2610 aa2.93□□□□□ -1.94
PTCD2-202ENST00000380639 Q5W150 140 aa2.93□□□□□ -1.94
PTCD2-202ENST00000380639 BPTFQ12830 3046 aa2.92□□□□□ -1.94
PTCD2-202ENST00000380639 LINC00612Q8N6U2 182 aa2.91□□□□□ -1.94
PTCD2-202ENST00000380639 NBDYA0A0U1RRE5 68 aa2.91□□□□□ -1.94
PTCD2-202ENST00000380639 PANO1I0J062 215 aa2.9□□□□□ -1.94
PTCD2-202ENST00000380639 TNP1P09430 55 aa2.9□□□□□ -1.94
PTCD2-202ENST00000380639 BAHCC1Q9P281 2608 aa2.9□□□□□ -1.95
PTCD2-202ENST00000380639 A8MU10 97 aa2.9□□□□□ -1.95
PTCD2-202ENST00000380639 LTBP2Q14767 1821 aa2.9□□□□□ -1.95
PTCD2-202ENST00000380639 KRTAP4-16G5E9R7 235 aaPredicted RBP2.89□□□□□ -1.95
PTCD2-202ENST00000380639 SPRR1BP22528 89 aa2.89□□□□□ -1.95
PTCD2-202ENST00000380639 SMR3BP02814 79 aaPredicted RBP2.88□□□□□ -1.95
PTCD2-202ENST00000380639 Q5VSD8 79 aa2.88□□□□□ -1.95
PTCD2-202ENST00000380639 KRTAP26-1Q6PEX3 210 aa2.88□□□□□ -1.95
PTCD2-202ENST00000380639 SETD2Q9BYW2 2564 aaPredicted RBP2.87□□□□□ -1.95
PTCD2-202ENST00000380639 MMP24-AS1A0A0U1RRL7 71 aa2.87□□□□□ -1.95
PTCD2-202ENST00000380639 FASNP49327 2511 aaKnown RBP2.86□□□□□ -1.95
PTCD2-202ENST00000380639 STAB1Q9NY15 2570 aa2.86□□□□□ -1.95
PTCD2-202ENST00000380639 KRTAP11-1Q8IUC1 163 aa2.85□□□□□ -1.95
PTCD2-202ENST00000380639 NOTCH1P46531 2555 aa2.85□□□□□ -1.95
PTCD2-202ENST00000380639 Q6ZPA2 131 aa2.85□□□□□ -1.95
PTCD2-202ENST00000380639 ANKRD17O75179 2603 aaKnown RBP2.84□□□□□ -1.95
PTCD2-202ENST00000380639 KRTAP23-1A1A580 65 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms