RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 TTC28Q96AY4 2481 aa10.97□□□□□ -0.65
COL4A3BP-203ENST00000380494 C9orf163Q8N9P6 203 aa10.96□□□□□ -0.65
COL4A3BP-203ENST00000380494 FAM229BQ4G0N7 80 aa10.95□□□□□ -0.66
COL4A3BP-203ENST00000380494 BDP1A6H8Y1 2624 aa10.95□□□□□ -0.66
COL4A3BP-203ENST00000380494 OXTP01178 125 aa10.95□□□□□ -0.66
COL4A3BP-203ENST00000380494 LINC00304Q8N9R0 145 aa10.94□□□□□ -0.66
COL4A3BP-203ENST00000380494 A0A096LNT2 108 aa10.93□□□□□ -0.66
COL4A3BP-203ENST00000380494 KRTAP24-1Q3LI83 254 aa10.93□□□□□ -0.66
COL4A3BP-203ENST00000380494 SONP18583 2426 aaKnown RBP10.93□□□□□ -0.66
COL4A3BP-203ENST00000380494 CACNA1AO00555 2505 aa10.92□□□□□ -0.66
COL4A3BP-203ENST00000380494 Q8N9P0 234 aaPredicted RBP10.92□□□□□ -0.66
COL4A3BP-203ENST00000380494 MYO9AB2RTY4 2548 aa10.9□□□□□ -0.66
COL4A3BP-203ENST00000380494 IGLV7-43P04211 117 aa10.89□□□□□ -0.67
COL4A3BP-203ENST00000380494 ZNF462Q96JM2 2506 aa10.88□□□□□ -0.67
COL4A3BP-203ENST00000380494 PRR26Q8N8Z3 221 aa10.88□□□□□ -0.67
COL4A3BP-203ENST00000380494 PIEZO2Q9H5I5 2752 aa10.87□□□□□ -0.67
COL4A3BP-203ENST00000380494 KRTAP10-11P60412 298 aa10.86□□□□□ -0.67
COL4A3BP-203ENST00000380494 Q5VV11 94 aa10.85□□□□□ -0.67
COL4A3BP-203ENST00000380494 A0A087WTM6 91 aa10.84□□□□□ -0.67
COL4A3BP-203ENST00000380494 NOTCH2Q04721 2471 aa10.84□□□□□ -0.67
COL4A3BP-203ENST00000380494 PSORS1C2Q9UIG4 136 aa10.83□□□□□ -0.68
COL4A3BP-203ENST00000380494 ABCA2Q9BZC7 2435 aa10.82□□□□□ -0.68
COL4A3BP-203ENST00000380494 CCDC168Q8NDH2 2452 aa10.81□□□□□ -0.68
COL4A3BP-203ENST00000380494 Q8N1X5 172 aa10.8□□□□□ -0.68
COL4A3BP-203ENST00000380494 C9orf92A6NGG3 77 aa10.8□□□□□ -0.68
COL4A3BP-203ENST00000380494 ANAPC11Q9NYG5 84 aa10.79□□□□□ -0.68
COL4A3BP-203ENST00000380494 CASC10Q5T4H9 136 aa10.78□□□□□ -0.68
COL4A3BP-203ENST00000380494 HRES1P13985 223 aa10.78□□□□□ -0.68
COL4A3BP-203ENST00000380494 KRTAP10-3P60369 221 aa10.78□□□□□ -0.68
COL4A3BP-203ENST00000380494 IGF2RP11717 2491 aa10.77□□□□□ -0.69
COL4A3BP-203ENST00000380494 MMP24-AS1A0A0U1RRL7 71 aa10.77□□□□□ -0.69
COL4A3BP-203ENST00000380494 A0A1B0GU33 70 aa10.76□□□□□ -0.69
COL4A3BP-203ENST00000380494 LUZP6Q538Z0 58 aa10.76□□□□□ -0.69
COL4A3BP-203ENST00000380494 TLN1Q9Y490 2541 aaKnown RBP10.76□□□□□ -0.69
COL4A3BP-203ENST00000380494 A0A0D9SG42 100 aa10.75□□□□□ -0.69
COL4A3BP-203ENST00000380494 K7EIL1 84 aa10.74□□□□□ -0.69
COL4A3BP-203ENST00000380494 PRAC1Q96KF2 57 aa10.72□□□□□ -0.69
COL4A3BP-203ENST00000380494 MYO18BQ8IUG5 2567 aa10.72□□□□□ -0.69
COL4A3BP-203ENST00000380494 FN1P02751 2386 aaKnown RBP10.71□□□□□ -0.7
COL4A3BP-203ENST00000380494 WWC2-AS2Q96NR7 200 aa10.71□□□□□ -0.7
COL4A3BP-203ENST00000380494 SPRR1AP35321 89 aa10.7□□□□□ -0.7
COL4A3BP-203ENST00000380494 J3QL48 77 aa10.67□□□□□ -0.7
COL4A3BP-203ENST00000380494 ASB16-AS1Q495Z4 193 aa10.64□□□□□ -0.71
COL4A3BP-203ENST00000380494 DMAC1Q96GE9 116 aa10.64□□□□□ -0.71
COL4A3BP-203ENST00000380494 Q8NDZ9 215 aa10.64□□□□□ -0.71
COL4A3BP-203ENST00000380494 SPINK7P58062 85 aa10.63□□□□□ -0.71
COL4A3BP-203ENST00000380494 NCOR2Q9Y618 2525 aa10.61□□□□□ -0.71
COL4A3BP-203ENST00000380494 CSAG1Q6PB30 78 aa10.61□□□□□ -0.71
COL4A3BP-203ENST00000380494 LINC00472Q9H8W2 130 aa10.61□□□□□ -0.71
COL4A3BP-203ENST00000380494 SPRR1BP22528 89 aa10.61□□□□□ -0.71
COL4A3BP-203ENST00000380494 COX6B2Q6YFQ2 88 aa10.59□□□□□ -0.71
COL4A3BP-203ENST00000380494 ABCA12Q86UK0 2595 aa10.56□□□□□ -0.72
COL4A3BP-203ENST00000380494 LRRK2Q5S007 2527 aa10.56□□□□□ -0.72
COL4A3BP-203ENST00000380494 USP9XQ93008 2570 aaPredicted RBP10.54□□□□□ -0.72
COL4A3BP-203ENST00000380494 ZCCHC13Q8WW36 166 aaKnown RBP10.54□□□□□ -0.72
COL4A3BP-203ENST00000380494 Q5W150 140 aa10.53□□□□□ -0.72
COL4A3BP-203ENST00000380494 WDR87Q6ZQQ6 2873 aa10.53□□□□□ -0.72
COL4A3BP-203ENST00000380494 LINC00483Q53H64 154 aa10.52□□□□□ -0.73
COL4A3BP-203ENST00000380494 KRTAP1-3Q8IUG1 177 aa10.51□□□□□ -0.73
COL4A3BP-203ENST00000380494 DOPEY1Q5JWR5 2465 aa10.49□□□□□ -0.73
COL4A3BP-203ENST00000380494 A0A0A0MQY5 61 aa10.47□□□□□ -0.73
COL4A3BP-203ENST00000380494 SRCAPQ6ZRS2 3230 aa10.46□□□□□ -0.73
COL4A3BP-203ENST00000380494 TLN2Q9Y4G6 2542 aa10.45□□□□□ -0.74
COL4A3BP-203ENST00000380494 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.45□□□□□ -0.74
COL4A3BP-203ENST00000380494 TNP2Q05952 138 aa10.44□□□□□ -0.74
COL4A3BP-203ENST00000380494 CR1P17927 2039 aa10.44□□□□□ -0.74
COL4A3BP-203ENST00000380494 PKD1L2Q7Z442 2459 aa10.43□□□□□ -0.74
COL4A3BP-203ENST00000380494 KRTAP1-1Q07627 177 aa10.43□□□□□ -0.74
COL4A3BP-203ENST00000380494 PLAC8Q9NZF1 115 aa10.43□□□□□ -0.74
COL4A3BP-203ENST00000380494 Q6ZR54 194 aa10.42□□□□□ -0.74
COL4A3BP-203ENST00000380494 KRTAP26-1Q6PEX3 210 aa10.42□□□□□ -0.74
COL4A3BP-203ENST00000380494 SMR3BP02814 79 aaPredicted RBP10.4□□□□□ -0.75
COL4A3BP-203ENST00000380494 ROMO1P60602 79 aa10.4□□□□□ -0.75
COL4A3BP-203ENST00000380494 A6NN06 94 aa10.38□□□□□ -0.75
COL4A3BP-203ENST00000380494 S4R3F8 94 aa10.38□□□□□ -0.75
COL4A3BP-203ENST00000380494 ANKRD17O75179 2603 aaKnown RBP10.37□□□□□ -0.75
COL4A3BP-203ENST00000380494 CAMK2N1Q7Z7J9 78 aa10.35□□□□□ -0.75
COL4A3BP-203ENST00000380494 KRTAP29-1A8MX34 341 aaPredicted RBP10.35□□□□□ -0.75
COL4A3BP-203ENST00000380494 USP9YO00507 2555 aaPredicted RBP10.34□□□□□ -0.75
COL4A3BP-203ENST00000380494 SETD2Q9BYW2 2564 aaPredicted RBP10.33□□□□□ -0.76
COL4A3BP-203ENST00000380494 EP400Q96L91 3159 aa10.33□□□□□ -0.76
COL4A3BP-203ENST00000380494 JMJD1CQ15652 2540 aa10.32□□□□□ -0.76
COL4A3BP-203ENST00000380494 Q6ZSA8 131 aa10.32□□□□□ -0.76
COL4A3BP-203ENST00000380494 PIEZO1Q92508 2521 aa10.32□□□□□ -0.76
COL4A3BP-203ENST00000380494 RPL37P61927 97 aaKnown RBP10.32□□□□□ -0.76
COL4A3BP-203ENST00000380494 H1FX-AS1Q4G0G2 97 aa10.31□□□□□ -0.76
COL4A3BP-203ENST00000380494 ANKRD11Q6UB99 2663 aaPredicted RBP10.3□□□□□ -0.76
COL4A3BP-203ENST00000380494 SPATA8Q6RVD6 105 aa10.28□□□□□ -0.76
COL4A3BP-203ENST00000380494 KRTAP4-16G5E9R7 235 aaPredicted RBP10.26□□□□□ -0.77
COL4A3BP-203ENST00000380494 LCE6AA0A183 80 aa10.25□□□□□ -0.77
COL4A3BP-203ENST00000380494 KRTAP16-1A8MUX0 517 aa10.21□□□□□ -0.78
COL4A3BP-203ENST00000380494 CEP295Q9C0D2 2601 aa10.2□□□□□ -0.78
COL4A3BP-203ENST00000380494 F8P00451 2351 aa10.19□□□□□ -0.78
COL4A3BP-203ENST00000380494 ZFYVE26Q68DK2 2539 aa10.16□□□□□ -0.78
COL4A3BP-203ENST00000380494 CHD8Q9HCK8 2581 aa10.16□□□□□ -0.78
COL4A3BP-203ENST00000380494 KRTAP25-1Q3LHN0 102 aa10.1□□□□□ -0.79
COL4A3BP-203ENST00000380494 MTORP42345 2549 aa10.1□□□□□ -0.79
COL4A3BP-203ENST00000380494 R4GN34 69 aa10.09□□□□□ -0.79
COL4A3BP-203ENST00000380494 CENPFP49454 3210 aa10.09□□□□□ -0.79
COL4A3BP-203ENST00000380494 A0A087X002 238 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms