RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 K7EIL1 84 aa7.3□□□□□ -1.24
NEDD9-201ENST00000379433 NCR3O14931 201 aa7.3□□□□□ -1.24
NEDD9-201ENST00000379433 ENHOQ6UWT2 76 aa7.3□□□□□ -1.24
NEDD9-201ENST00000379433 C7orf65Q6ZTY9 151 aa7.3□□□□□ -1.24
NEDD9-201ENST00000379433 H0Y9J4 135 aa7.3□□□□□ -1.24
NEDD9-201ENST00000379433 EGFEM1PQ0D2K5 195 aa7.29□□□□□ -1.24
NEDD9-201ENST00000379433 CMYA5Q8N3K9 4069 aa7.29□□□□□ -1.24
NEDD9-201ENST00000379433 LYSTQ99698 3801 aa7.29□□□□□ -1.24
NEDD9-201ENST00000379433 ATP5EP56381 51 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-201ENST00000379433 TGP01266 2768 aa7.29□□□□□ -1.24
NEDD9-201ENST00000379433 LINC01554Q52M75 96 aa7.29□□□□□ -1.24
NEDD9-201ENST00000379433 UBE2AP49459 152 aa7.28□□□□□ -1.24
NEDD9-201ENST00000379433 IGKV2-28A0A075B6P5 120 aa7.27□□□□□ -1.24
NEDD9-201ENST00000379433 IGKV2D-28P01615 120 aa7.27□□□□□ -1.24
NEDD9-201ENST00000379433 SLPIP03973 132 aa7.27□□□□□ -1.25
NEDD9-201ENST00000379433 PHF5AQ7RTV0 110 aaKnown RBP7.27□□□□□ -1.25
NEDD9-201ENST00000379433 TRAV23DV6A0A075B6W5 121 aa7.27□□□□□ -1.25
NEDD9-201ENST00000379433 TRBV30A0A0K0K1B3 111 aa7.26□□□□□ -1.25
NEDD9-201ENST00000379433 RMI2Q96E14 147 aa7.26□□□□□ -1.25
NEDD9-201ENST00000379433 PLA2G2DQ9UNK4 145 aa7.26□□□□□ -1.25
NEDD9-201ENST00000379433 IBA57-AS1B1ANH7 110 aa7.26□□□□□ -1.25
NEDD9-201ENST00000379433 FAM218AQ96MZ4 157 aa7.26□□□□□ -1.25
NEDD9-201ENST00000379433 Q8IZM0 81 aa7.26□□□□□ -1.25
NEDD9-201ENST00000379433 SMIM11BQ8TCY0 68 aa7.26□□□□□ -1.25
NEDD9-201ENST00000379433 DIRC1Q969H9 104 aa7.25□□□□□ -1.25
NEDD9-201ENST00000379433 LINC01600Q96MT4 127 aa7.25□□□□□ -1.25
NEDD9-201ENST00000379433 TRAV13-2A0A0B4J235 113 aa7.24□□□□□ -1.25
NEDD9-201ENST00000379433 KIAA0087Q14695 138 aa7.24□□□□□ -1.25
NEDD9-201ENST00000379433 CAMK2N2Q96S95 79 aa7.24□□□□□ -1.25
NEDD9-201ENST00000379433 LRCOL1A6NCL2 159 aa7.23□□□□□ -1.25
NEDD9-201ENST00000379433 A8MU10 97 aa7.23□□□□□ -1.25
NEDD9-201ENST00000379433 A0A087WYN8 130 aa7.22□□□□□ -1.25
NEDD9-201ENST00000379433 DNAL4O96015 105 aa7.22□□□□□ -1.25
NEDD9-201ENST00000379433 Q8NDZ9 215 aa7.22□□□□□ -1.25
NEDD9-201ENST00000379433 BAALC-AS2P0C853 105 aa7.22□□□□□ -1.25
NEDD9-201ENST00000379433 FAM30AQ9NZY2 134 aa7.22□□□□□ -1.25
NEDD9-201ENST00000379433 CASC10Q5T4H9 136 aa7.21□□□□□ -1.26
NEDD9-201ENST00000379433 NDUFC1O43677 76 aa7.2□□□□□ -1.26
NEDD9-201ENST00000379433 Q75L30 129 aa7.19□□□□□ -1.26
NEDD9-201ENST00000379433 PRR34Q9NV39 138 aa7.19□□□□□ -1.26
NEDD9-201ENST00000379433 C6orf48Q9UBA6 75 aa7.19□□□□□ -1.26
NEDD9-201ENST00000379433 TRAV10A0A0B4J240 114 aa7.19□□□□□ -1.26
NEDD9-201ENST00000379433 KLKP1Q107X0 134 aa7.18□□□□□ -1.26
NEDD9-201ENST00000379433 SYCNQ0VAF6 134 aa7.18□□□□□ -1.26
NEDD9-201ENST00000379433 Q6JHZ5 121 aa7.17□□□□□ -1.26
NEDD9-201ENST00000379433 ATP11AUNQ6ZP68 121 aa7.17□□□□□ -1.26
NEDD9-201ENST00000379433 UBE2DNLQ8IWF7 75 aa7.17□□□□□ -1.26
NEDD9-201ENST00000379433 CXCL6P80162 114 aa7.16□□□□□ -1.26
NEDD9-201ENST00000379433 HUWE1Q7Z6Z7 4374 aaKnown RBP7.16□□□□□ -1.26
NEDD9-201ENST00000379433 TRAV7A0A075B6U4 112 aa7.15□□□□□ -1.26
NEDD9-201ENST00000379433 C9orf129Q5T035 196 aaKnown RBP7.15□□□□□ -1.26
NEDD9-201ENST00000379433 HCG22E2RYF7 251 aa7.15□□□□□ -1.27
NEDD9-201ENST00000379433 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-201ENST00000379433 CHKB-CPT1BH3BT56 60 aa7.14□□□□□ -1.27
NEDD9-201ENST00000379433 IGHV6-1A0A0B4J1U7 121 aa7.14□□□□□ -1.27
NEDD9-201ENST00000379433 RPL28P46779 137 aaKnown RBP7.14□□□□□ -1.27
NEDD9-201ENST00000379433 C15orf56Q8N910 161 aa7.14□□□□□ -1.27
NEDD9-201ENST00000379433 A6NN06 94 aa7.14□□□□□ -1.27
NEDD9-201ENST00000379433 C14orf132Q9NPU4 83 aa7.14□□□□□ -1.27
NEDD9-201ENST00000379433 C16orf90A8MZG2 172 aa7.13□□□□□ -1.27
NEDD9-201ENST00000379433 M0R2N4 97 aa7.13□□□□□ -1.27
NEDD9-201ENST00000379433 TRBV10-3A0A0K0K1G6 114 aa7.13□□□□□ -1.27
NEDD9-201ENST00000379433 PSCAO43653 123 aa7.13□□□□□ -1.27
NEDD9-201ENST00000379433 Q1T7F1 81 aa7.12□□□□□ -1.27
NEDD9-201ENST00000379433 LINC01556Q5JQF7 62 aa7.12□□□□□ -1.27
NEDD9-201ENST00000379433 DNHD1Q96M86 4753 aa7.12□□□□□ -1.27
NEDD9-201ENST00000379433 MEGF8Q7Z7M0 2845 aa7.12□□□□□ -1.27
NEDD9-201ENST00000379433 TRAV22A0A0B4J277 110 aa7.12□□□□□ -1.27
NEDD9-201ENST00000379433 IGKV2-24A0A0C4DH68 120 aa7.11□□□□□ -1.27
NEDD9-201ENST00000379433 RPL37AP8A6NKH3 93 aa7.11□□□□□ -1.27
NEDD9-201ENST00000379433 H3BNG1 76 aa7.11□□□□□ -1.27
NEDD9-201ENST00000379433 Q6ZRP5 223 aa7.11□□□□□ -1.27
NEDD9-201ENST00000379433 PRAC1Q96KF2 57 aa7.11□□□□□ -1.27
NEDD9-201ENST00000379433 COX17Q14061 63 aa7.1□□□□□ -1.27
NEDD9-201ENST00000379433 SCXQ7RTU7 201 aa7.1□□□□□ -1.27
NEDD9-201ENST00000379433 FAM168BA1KXE4 195 aa7.1□□□□□ -1.27
NEDD9-201ENST00000379433 SRRM2Q9UQ35 2752 aaKnown RBP7.09□□□□□ -1.27
NEDD9-201ENST00000379433 DNAH10Q8IVF4 4471 aa7.09□□□□□ -1.27
NEDD9-201ENST00000379433 RETNLBQ9BQ08 111 aa7.09□□□□□ -1.27
NEDD9-201ENST00000379433 KRTAP26-1Q6PEX3 210 aa7.09□□□□□ -1.28
NEDD9-201ENST00000379433 REG3GQ6UW15 175 aa7.08□□□□□ -1.28
NEDD9-201ENST00000379433 KRTAP1-5Q9BYS1 174 aa7.08□□□□□ -1.28
NEDD9-201ENST00000379433 DNAH3Q8TD57 4116 aa7.08□□□□□ -1.28
NEDD9-201ENST00000379433 H0YGX0 51 aa7.07□□□□□ -1.28
NEDD9-201ENST00000379433 TNP2Q05952 138 aa7.07□□□□□ -1.28
NEDD9-201ENST00000379433 DEFB105AQ8NG35 78 aa7.07□□□□□ -1.28
NEDD9-201ENST00000379433 DNAH10OSP0CZ25 163 aa7.07□□□□□ -1.28
NEDD9-201ENST00000379433 DNAH7Q8WXX0 4024 aa7.07□□□□□ -1.28
NEDD9-201ENST00000379433 ORMDL1Q9P0S3 153 aa7.06□□□□□ -1.28
NEDD9-201ENST00000379433 Q6ZQY7 126 aa7.06□□□□□ -1.28
NEDD9-201ENST00000379433 PRKDCP78527 4128 aaKnown RBP7.06□□□□□ -1.28
NEDD9-201ENST00000379433 PLA2G1BP04054 148 aaKnown RBP7.06□□□□□ -1.28
NEDD9-201ENST00000379433 LINC00846Q9NV44 126 aa7.06□□□□□ -1.28
NEDD9-201ENST00000379433 Q8N814 137 aa7.05□□□□□ -1.28
NEDD9-201ENST00000379433 A6NED7 52 aa7.04□□□□□ -1.28
NEDD9-201ENST00000379433 C22orf24Q9Y442 160 aa7.04□□□□□ -1.28
NEDD9-201ENST00000379433 FBN3Q75N90 2809 aa7.01□□□□□ -1.29
NEDD9-201ENST00000379433 DNAH9Q9NYC9 4486 aa7.01□□□□□ -1.29
NEDD9-201ENST00000379433 B9D2Q9BPU9 175 aa7.01□□□□□ -1.29
NEDD9-201ENST00000379433 GVQW2A0A096LPI5 108 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms