RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 FRYLO94915 3013 aa10.14□□□□□ -0.79
NPHP4-201ENST00000378156 TM2D3Q9BRN9 247 aa10.14□□□□□ -0.79
NPHP4-201ENST00000378156 RETNLBQ9BQ08 111 aa10.13□□□□□ -0.79
NPHP4-201ENST00000378156 NBDYA0A0U1RRE5 68 aa10.13□□□□□ -0.79
NPHP4-201ENST00000378156 SERTAD4-AS1Q5TG53 156 aa10.13□□□□□ -0.79
NPHP4-201ENST00000378156 KRTAP1-3Q8IUG1 177 aa10.13□□□□□ -0.79
NPHP4-201ENST00000378156 FREM2Q5SZK8 3169 aa10.12□□□□□ -0.79
NPHP4-201ENST00000378156 DNAH10OSP0CZ25 163 aa10.11□□□□□ -0.79
NPHP4-201ENST00000378156 KRTAP10-3P60369 221 aa10.11□□□□□ -0.79
NPHP4-201ENST00000378156 TRAV22A0A0B4J277 110 aa10.1□□□□□ -0.79
NPHP4-201ENST00000378156 GVQW2A0A096LPI5 108 aaPredicted RBP10.1□□□□□ -0.79
NPHP4-201ENST00000378156 C8orf87E5RJ46 101 aa10.08□□□□□ -0.8
NPHP4-201ENST00000378156 KRTAP10-11P60412 298 aa10.08□□□□□ -0.8
NPHP4-201ENST00000378156 IGKV2D-30A0A075B6S6 120 aa10.07□□□□□ -0.8
NPHP4-201ENST00000378156 IGKV2-30P06310 120 aa10.07□□□□□ -0.8
NPHP4-201ENST00000378156 Q6ZRX8 168 aa10.07□□□□□ -0.8
NPHP4-201ENST00000378156 BOD1L1Q8NFC6 3051 aa10.07□□□□□ -0.8
NPHP4-201ENST00000378156 K7EIL1 84 aa10.06□□□□□ -0.8
NPHP4-201ENST00000378156 CYP4F30PQ9H0H9 118 aa10.06□□□□□ -0.8
NPHP4-201ENST00000378156 KRTAP1-1Q07627 177 aa10.06□□□□□ -0.8
NPHP4-201ENST00000378156 C16orf90A8MZG2 172 aa10.06□□□□□ -0.8
NPHP4-201ENST00000378156 C7orf65Q6ZTY9 151 aa10.05□□□□□ -0.8
NPHP4-201ENST00000378156 PHF5AQ7RTV0 110 aaKnown RBP10.05□□□□□ -0.8
NPHP4-201ENST00000378156 LINC00476Q8WZB0 136 aa10.05□□□□□ -0.8
NPHP4-201ENST00000378156 ATP11AUNQ6ZP68 121 aa10.04□□□□□ -0.8
NPHP4-201ENST00000378156 Q6ZRP5 223 aa10.04□□□□□ -0.8
NPHP4-201ENST00000378156 TEP1Q99973 2627 aaKnown RBP10.03□□□□□ -0.8
NPHP4-201ENST00000378156 KLKP1Q107X0 134 aa10.03□□□□□ -0.8
NPHP4-201ENST00000378156 LINC00612Q8N6U2 182 aa10.03□□□□□ -0.8
NPHP4-201ENST00000378156 TRBV7-4A0A0J9YYF1 115 aa10.02□□□□□ -0.8
NPHP4-201ENST00000378156 RTL8CO15255 209 aa10.02□□□□□ -0.8
NPHP4-201ENST00000378156 VPREB1P12018 145 aa10.02□□□□□ -0.81
NPHP4-201ENST00000378156 PRR34Q9NV39 138 aa10.01□□□□□ -0.81
NPHP4-201ENST00000378156 EYSQ5T1H1 3165 aa10.01□□□□□ -0.81
NPHP4-201ENST00000378156 IGLV6-57P01721 117 aa10.01□□□□□ -0.81
NPHP4-201ENST00000378156 MOBPQ13875 183 aa10.01□□□□□ -0.81
NPHP4-201ENST00000378156 ADGRG4Q8IZF6 3080 aa10□□□□□ -0.81
NPHP4-201ENST00000378156 CHTF8P0CG12 524 aa10□□□□□ -0.81
NPHP4-201ENST00000378156 WWC2-AS2Q96NR7 200 aa9.99□□□□□ -0.81
NPHP4-201ENST00000378156 CHD6Q8TD26 2715 aa9.99□□□□□ -0.81
NPHP4-201ENST00000378156 EPM2AB3EWF7 344 aa9.98□□□□□ -0.81
NPHP4-201ENST00000378156 COL6A3P12111 3177 aa9.98□□□□□ -0.81
NPHP4-201ENST00000378156 LOC101927531A0A1B0GV80 90 aa9.98□□□□□ -0.81
NPHP4-201ENST00000378156 REV3LO60673 3130 aa9.97□□□□□ -0.81
NPHP4-201ENST00000378156 SPTBN5Q9NRC6 3674 aaKnown RBP9.97□□□□□ -0.81
NPHP4-201ENST00000378156 A8MUN3 132 aa9.97□□□□□ -0.81
NPHP4-201ENST00000378156 ST20-AS1Q8NBB2 130 aa9.97□□□□□ -0.81
NPHP4-201ENST00000378156 FAM104AQ969W3 186 aa9.97□□□□□ -0.81
NPHP4-201ENST00000378156 KALRNO60229 2985 aa9.95□□□□□ -0.82
NPHP4-201ENST00000378156 C9orf129Q5T035 196 aaKnown RBP9.95□□□□□ -0.82
NPHP4-201ENST00000378156 SETXQ7Z333 2677 aaKnown RBP9.94□□□□□ -0.82
NPHP4-201ENST00000378156 FAM168BA1KXE4 195 aa9.93□□□□□ -0.82
NPHP4-201ENST00000378156 A8MWP4 228 aa9.93□□□□□ -0.82
NPHP4-201ENST00000378156 ATMQ13315 3056 aa9.93□□□□□ -0.82
NPHP4-201ENST00000378156 TEX15Q9BXT5 2789 aa9.93□□□□□ -0.82
NPHP4-201ENST00000378156 SPACA4Q8TDM5 124 aa9.92□□□□□ -0.82
NPHP4-201ENST00000378156 COA5Q86WW8 74 aa9.92□□□□□ -0.82
NPHP4-201ENST00000378156 STAB1Q9NY15 2570 aa9.92□□□□□ -0.82
NPHP4-201ENST00000378156 CD164Q04900 197 aa9.91□□□□□ -0.82
NPHP4-201ENST00000378156 LINC00336Q6ZUF6 198 aa9.91□□□□□ -0.82
NPHP4-201ENST00000378156 C15orf56Q8N910 161 aa9.91□□□□□ -0.82
NPHP4-201ENST00000378156 LINC00313P59037 77 aa9.9□□□□□ -0.82
NPHP4-201ENST00000378156 K7EQZ3 153 aa9.9□□□□□ -0.82
NPHP4-201ENST00000378156 KCNQ1DNQ9H478 68 aa9.9□□□□□ -0.83
NPHP4-201ENST00000378156 H7BZZ5 65 aa9.89□□□□□ -0.83
NPHP4-201ENST00000378156 RPL37AP61513 92 aaKnown RBP9.89□□□□□ -0.83
NPHP4-201ENST00000378156 IGLV1-50A0A075B6I6 118 aa9.88□□□□□ -0.83
NPHP4-201ENST00000378156 FAM229AH3BQW9 127 aa9.88□□□□□ -0.83
NPHP4-201ENST00000378156 UQCR11O14957 56 aa9.88□□□□□ -0.83
NPHP4-201ENST00000378156 LINC00528Q8N1L1 170 aa9.88□□□□□ -0.83
NPHP4-201ENST00000378156 COL6A5A8TX70 2615 aa9.87□□□□□ -0.83
NPHP4-201ENST00000378156 MRPL34Q9BQ48 92 aaKnown RBP9.86□□□□□ -0.83
NPHP4-201ENST00000378156 DMXL2Q8TDJ6 3036 aa9.86□□□□□ -0.83
NPHP4-201ENST00000378156 IGSF10Q6WRI0 2623 aa9.85□□□□□ -0.83
NPHP4-201ENST00000378156 LINC01600Q96MT4 127 aa9.85□□□□□ -0.83
NPHP4-201ENST00000378156 UNC79Q9P2D8 2635 aa9.84□□□□□ -0.83
NPHP4-201ENST00000378156 GCN1Q92616 2671 aaKnown RBP9.84□□□□□ -0.83
NPHP4-201ENST00000378156 TYMSOSQ8TAI1 123 aa9.82□□□□□ -0.84
NPHP4-201ENST00000378156 SPINT4Q6UDR6 99 aa9.82□□□□□ -0.84
NPHP4-201ENST00000378156 MYO15AQ9UKN7 3530 aa9.81□□□□□ -0.84
NPHP4-201ENST00000378156 LRBAP50851 2863 aa9.81□□□□□ -0.84
NPHP4-201ENST00000378156 PRR15Q8IV56 129 aa9.81□□□□□ -0.84
NPHP4-201ENST00000378156 IGLV8-61A0A075B6I0 122 aa9.81□□□□□ -0.84
NPHP4-201ENST00000378156 C9orf163Q8N9P6 203 aa9.81□□□□□ -0.84
NPHP4-201ENST00000378156 KTN1-AS1Q86SY8 53 aa9.79□□□□□ -0.84
NPHP4-201ENST00000378156 COL12A1Q99715 3063 aa9.79□□□□□ -0.84
NPHP4-201ENST00000378156 FLNCQ14315 2725 aa9.79□□□□□ -0.84
NPHP4-201ENST00000378156 TLX1NBP0CAT3 122 aa9.79□□□□□ -0.84
NPHP4-201ENST00000378156 NOTCH1P46531 2555 aa9.78□□□□□ -0.84
NPHP4-201ENST00000378156 A0A087WTM6 91 aa9.78□□□□□ -0.84
NPHP4-201ENST00000378156 Q8N377 158 aa9.77□□□□□ -0.85
NPHP4-201ENST00000378156 CFAP47Q6ZTR5 3102 aa9.76□□□□□ -0.85
NPHP4-201ENST00000378156 NBEAL2Q6ZNJ1 2754 aa9.76□□□□□ -0.85
NPHP4-201ENST00000378156 TACC2O95359 2948 aa9.76□□□□□ -0.85
NPHP4-201ENST00000378156 LCA10Q71F78 164 aa9.76□□□□□ -0.85
NPHP4-201ENST00000378156 CR1P17927 2039 aa9.75□□□□□ -0.85
NPHP4-201ENST00000378156 IGFL1Q6UW32 110 aa9.75□□□□□ -0.85
NPHP4-201ENST00000378156 MIR22HGQ0VDD5 57 aa9.75□□□□□ -0.85
NPHP4-201ENST00000378156 APLNQ9ULZ1 77 aa9.75□□□□□ -0.85
NPHP4-201ENST00000378156 CASC10Q5T4H9 136 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms