RNA–Protein interactions for RNA: ENST00000377823.1

CUBN-201, Transcript of cubilin, humanhuman

TSL 3 BASIC

Gene CUBN, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-201ENST00000377823 GREB1Q4ZG55 1949 aa1.85□□□□□ -2.11
CUBN-201ENST00000377823 CCDC168Q8NDH2 2452 aa1.85□□□□□ -2.11
CUBN-201ENST00000377823 DLG5Q8TDM6 1919 aa1.85□□□□□ -2.11
CUBN-201ENST00000377823 ANKHD1Q8IWZ3 2542 aaKnown RBP1.85□□□□□ -2.11
CUBN-201ENST00000377823 HIVEP1P15822 2718 aa1.85□□□□□ -2.11
CUBN-201ENST00000377823 LAMA4Q16363 1823 aa1.85□□□□□ -2.11
CUBN-201ENST00000377823 NIPBLQ6KC79 2804 aaeCLIP1.85□□□□□ -2.11
CUBN-201ENST00000377823 MGAQ8IWI9 3026 aa1.85□□□□□ -2.11
CUBN-201ENST00000377823 CSAG1Q6PB30 78 aa1.85□□□□□ -2.11
CUBN-201ENST00000377823 LINC00208Q96KT6 92 aa1.85□□□□□ -2.11
CUBN-201ENST00000377823 OBSCN-AS1Q96MR7 158 aa1.85□□□□□ -2.11
CUBN-201ENST00000377823 AHCTF1Q8WYP5 2266 aa1.85□□□□□ -2.11
CUBN-201ENST00000377823 APC2O95996 2303 aa1.84□□□□□ -2.11
CUBN-201ENST00000377823 CSMD1Q96PZ7 3565 aa1.84□□□□□ -2.11
CUBN-201ENST00000377823 A0A087WVE0 104 aa1.84□□□□□ -2.11
CUBN-201ENST00000377823 TRBV6-1A0A0K0K1D8 114 aa1.84□□□□□ -2.11
CUBN-201ENST00000377823 H0Y9P7 68 aa1.84□□□□□ -2.11
CUBN-201ENST00000377823 H0YGX0 51 aa1.84□□□□□ -2.11
CUBN-201ENST00000377823 J3QRE1 110 aa1.84□□□□□ -2.11
CUBN-201ENST00000377823 DEFB114Q30KQ6 69 aa1.84□□□□□ -2.11
CUBN-201ENST00000377823 ENHOQ6UWT2 76 aa1.84□□□□□ -2.11
CUBN-201ENST00000377823 Q6ZTI0 123 aa1.84□□□□□ -2.11
CUBN-201ENST00000377823 LYPD6Q86Y78 171 aa1.84□□□□□ -2.11
CUBN-201ENST00000377823 ZNF407Q9C0G0 2248 aa1.84□□□□□ -2.11
CUBN-201ENST00000377823 NINQ8N4C6 2090 aa1.84□□□□□ -2.12
CUBN-201ENST00000377823 MUC4Q99102 2169 aa1.83□□□□□ -2.12
CUBN-201ENST00000377823 PTPRSQ13332 1948 aa1.83□□□□□ -2.12
CUBN-201ENST00000377823 CRYBG3Q68DQ2 2970 aa1.83□□□□□ -2.12
CUBN-201ENST00000377823 LAMA1P25391 3075 aa1.83□□□□□ -2.12
CUBN-201ENST00000377823 ZNF236Q9UL36 1845 aa1.83□□□□□ -2.12
CUBN-201ENST00000377823 LCE6AA0A183 80 aa1.83□□□□□ -2.12
CUBN-201ENST00000377823 M0R3E3 92 aa1.83□□□□□ -2.12
CUBN-201ENST00000377823 CCL3L1P16619 93 aa1.83□□□□□ -2.12
CUBN-201ENST00000377823 CCL18P55774 89 aa1.83□□□□□ -2.12
CUBN-201ENST00000377823 WFDC9Q8NEX5 89 aa1.83□□□□□ -2.12
CUBN-201ENST00000377823 WFDC10AQ9H1F0 79 aa1.83□□□□□ -2.12
CUBN-201ENST00000377823 MYO16Q9Y6X6 1858 aa1.83□□□□□ -2.12
CUBN-201ENST00000377823 ANKRD36A6QL64 1941 aa1.83□□□□□ -2.12
CUBN-201ENST00000377823 SPTBN1Q01082 2364 aaKnown RBP1.83□□□□□ -2.12
CUBN-201ENST00000377823 MED13LQ71F56 2210 aa1.82□□□□□ -2.12
CUBN-201ENST00000377823 CELSR2Q9HCU4 2923 aa1.82□□□□□ -2.12
CUBN-201ENST00000377823 URB1O60287 2271 aaKnown RBP1.82□□□□□ -2.12
CUBN-201ENST00000377823 TRAV21A0A0B4J279 112 aa1.82□□□□□ -2.12
CUBN-201ENST00000377823 M0R135 149 aa1.82□□□□□ -2.12
CUBN-201ENST00000377823 TFF1P04155 84 aa1.82□□□□□ -2.12
CUBN-201ENST00000377823 KRTAP13-1Q8IUC0 172 aa1.82□□□□□ -2.12
CUBN-201ENST00000377823 KLK9Q9UKQ9 250 aa1.82□□□□□ -2.12
CUBN-201ENST00000377823 NBEAL2Q6ZNJ1 2754 aa1.82□□□□□ -2.12
CUBN-201ENST00000377823 PLXNB1O43157 2135 aa1.82□□□□□ -2.12
CUBN-201ENST00000377823 HEATR1Q9H583 2144 aaKnown RBP1.82□□□□□ -2.12
CUBN-201ENST00000377823 MUC22E2RYF6 1773 aaPredicted RBP1.82□□□□□ -2.12
CUBN-201ENST00000377823 FLNAP21333 2647 aaKnown RBP1.82□□□□□ -2.12
CUBN-201ENST00000377823 NBASA2RRP1 2371 aa1.81□□□□□ -2.12
CUBN-201ENST00000377823 CLPSL1A2RUU4 121 aa1.81□□□□□ -2.12
CUBN-201ENST00000377823 MRPL33O75394 65 aaKnown RBP1.81□□□□□ -2.12
CUBN-201ENST00000377823 CTSGP08311 255 aa1.81□□□□□ -2.12
CUBN-201ENST00000377823 COX6B1P14854 86 aa1.81□□□□□ -2.12
CUBN-201ENST00000377823 RPL38P63173 70 aaKnown RBP1.81□□□□□ -2.12
CUBN-201ENST00000377823 PATE1Q8WXA2 126 aa1.81□□□□□ -2.12
CUBN-201ENST00000377823 GAFA1Q96PS6 74 aa1.81□□□□□ -2.12
CUBN-201ENST00000377823 PLAC8Q9NZF1 115 aa1.81□□□□□ -2.12
CUBN-201ENST00000377823 CENPEQ02224 2701 aa1.81□□□□□ -2.12
CUBN-201ENST00000377823 UTP20O75691 2785 aaKnown RBP1.81□□□□□ -2.12
CUBN-201ENST00000377823 APCP25054 2843 aa1.81□□□□□ -2.12
CUBN-201ENST00000377823 CACNA1EQ15878 2313 aa1.8□□□□□ -2.12
CUBN-201ENST00000377823 IGKV3-7A0A075B6H7 116 aa1.8□□□□□ -2.12
CUBN-201ENST00000377823 IGIPA6NJ69 53 aa1.8□□□□□ -2.12
CUBN-201ENST00000377823 C10orf142B7Z368 130 aa1.8□□□□□ -2.12
CUBN-201ENST00000377823 I3L3M4 83 aa1.8□□□□□ -2.12
CUBN-201ENST00000377823 FREM3P0C091 2139 aa1.8□□□□□ -2.12
CUBN-201ENST00000377823 SPATA8Q6RVD6 105 aa1.8□□□□□ -2.12
CUBN-201ENST00000377823 ZCCHC13Q8WW36 166 aaKnown RBP1.8□□□□□ -2.12
CUBN-201ENST00000377823 ICE1Q9Y2F5 2266 aa1.8□□□□□ -2.12
CUBN-201ENST00000377823 CSMD2Q7Z408 3487 aa1.8□□□□□ -2.12
CUBN-201ENST00000377823 MYOFQ9NZM1 2061 aa1.79□□□□□ -2.12
CUBN-201ENST00000377823 IGKV2-40A0A087WW87 121 aaPredicted RBP1.79□□□□□ -2.12
CUBN-201ENST00000377823 LOC110117498A0A087WWA1 95 aa1.79□□□□□ -2.12
CUBN-201ENST00000377823 TRGV4A0A0C4DH28 118 aa1.79□□□□□ -2.12
CUBN-201ENST00000377823 TRBV6-4A0A1B0GX49 114 aa1.79□□□□□ -2.12
CUBN-201ENST00000377823 M0R1W7 72 aa1.79□□□□□ -2.12
CUBN-201ENST00000377823 SPINK4O60575 86 aa1.79□□□□□ -2.12
CUBN-201ENST00000377823 IGKV2D-40P01614 121 aaPredicted RBP1.79□□□□□ -2.12
CUBN-201ENST00000377823 ZNF137PP52743 207 aa1.79□□□□□ -2.12
CUBN-201ENST00000377823 FDCSPQ8NFU4 85 aa1.79□□□□□ -2.12
CUBN-201ENST00000377823 PRO2289Q9P1D8 64 aa1.79□□□□□ -2.12
CUBN-201ENST00000377823 TIMM8BQ9Y5J9 83 aaPredicted RBP1.79□□□□□ -2.12
CUBN-201ENST00000377823 MYO7BQ6PIF6 2116 aa1.79□□□□□ -2.12
CUBN-201ENST00000377823 MYO7AQ13402 2215 aa1.79□□□□□ -2.12
CUBN-201ENST00000377823 CSPG4Q6UVK1 2322 aa1.78□□□□□ -2.12
CUBN-201ENST00000377823 EML5Q05BV3 1969 aa1.78□□□□□ -2.12
CUBN-201ENST00000377823 ARL14EPLP0DKL9 152 aa1.78□□□□□ -2.12
CUBN-201ENST00000377823 DEFB112Q30KQ8 113 aa1.78□□□□□ -2.12
CUBN-201ENST00000377823 C9orf163Q8N9P6 203 aa1.78□□□□□ -2.12
CUBN-201ENST00000377823 SPRR4Q96PI1 79 aa1.78□□□□□ -2.12
CUBN-201ENST00000377823 TTTY12Q9BZ98 90 aa1.78□□□□□ -2.12
CUBN-201ENST00000377823 AKAP9Q99996 3911 aa1.78□□□□□ -2.12
CUBN-201ENST00000377823 MED13Q9UHV7 2174 aa1.78□□□□□ -2.13
CUBN-201ENST00000377823 BAZ2BQ9UIF8 2168 aaKnown RBP1.78□□□□□ -2.13
CUBN-201ENST00000377823 PI4KAP42356 2102 aa1.78□□□□□ -2.13
CUBN-201ENST00000377823 HEATR5BQ9P2D3 2071 aa1.78□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms