RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 EIF4EBP3O60516 100 aaPredicted RBP11.8□□□□□ -0.52
CNTNAP3-204ENST00000377656 HTTP42858 3142 aa11.79□□□□□ -0.52
CNTNAP3-204ENST00000377656 CFAP54Q96N23 3096 aa11.79□□□□□ -0.52
CNTNAP3-204ENST00000377656 CHD9Q3L8U1 2897 aa11.79□□□□□ -0.52
CNTNAP3-204ENST00000377656 RPS28P62857 69 aaKnown RBP11.78□□□□□ -0.52
CNTNAP3-204ENST00000377656 LINC00612Q8N6U2 182 aa11.78□□□□□ -0.52
CNTNAP3-204ENST00000377656 A8MWP4 228 aa11.77□□□□□ -0.53
CNTNAP3-204ENST00000377656 SPAG11AQ6PDA7 123 aa11.77□□□□□ -0.53
CNTNAP3-204ENST00000377656 C15orf56Q8N910 161 aa11.77□□□□□ -0.53
CNTNAP3-204ENST00000377656 LAMA3Q16787 3333 aa11.77□□□□□ -0.53
CNTNAP3-204ENST00000377656 PLA2G1BP04054 148 aaKnown RBP11.76□□□□□ -0.53
CNTNAP3-204ENST00000377656 KRTAP10-3P60369 221 aa11.76□□□□□ -0.53
CNTNAP3-204ENST00000377656 LAMA2P24043 3122 aaKnown RBP11.76□□□□□ -0.53
CNTNAP3-204ENST00000377656 C8orf87E5RJ46 101 aa11.74□□□□□ -0.53
CNTNAP3-204ENST00000377656 Q96NJ1 140 aa11.74□□□□□ -0.53
CNTNAP3-204ENST00000377656 MKI67P46013 3256 aaKnown RBP11.74□□□□□ -0.53
CNTNAP3-204ENST00000377656 K7EQZ3 153 aa11.74□□□□□ -0.53
CNTNAP3-204ENST00000377656 LOC101927531A0A1B0GV80 90 aa11.73□□□□□ -0.53
CNTNAP3-204ENST00000377656 ZNF575Q86XF7 245 aa11.72□□□□□ -0.53
CNTNAP3-204ENST00000377656 CFAP46Q8IYW2 2715 aa11.72□□□□□ -0.53
CNTNAP3-204ENST00000377656 MRPL34Q9BQ48 92 aaKnown RBP11.71□□□□□ -0.53
CNTNAP3-204ENST00000377656 PRO0628Q9UI54 55 aa11.7□□□□□ -0.54
CNTNAP3-204ENST00000377656 IGFL1Q6UW32 110 aa11.69□□□□□ -0.54
CNTNAP3-204ENST00000377656 BRCA2P51587 3418 aa11.69□□□□□ -0.54
CNTNAP3-204ENST00000377656 C9orf129Q5T035 196 aaKnown RBP11.68□□□□□ -0.54
CNTNAP3-204ENST00000377656 ATP11AUNQ6ZP68 121 aa11.68□□□□□ -0.54
CNTNAP3-204ENST00000377656 C9orf163Q8N9P6 203 aa11.68□□□□□ -0.54
CNTNAP3-204ENST00000377656 ZNF861PO60384 105 aa11.67□□□□□ -0.54
CNTNAP3-204ENST00000377656 A0A087WTM6 91 aa11.66□□□□□ -0.54
CNTNAP3-204ENST00000377656 TLX1NBP0CAT3 122 aa11.66□□□□□ -0.54
CNTNAP3-204ENST00000377656 SSBP3-AS1Q7Z2R9 100 aa11.66□□□□□ -0.54
CNTNAP3-204ENST00000377656 Q8N377 158 aa11.66□□□□□ -0.54
CNTNAP3-204ENST00000377656 KRTAP1-3Q8IUG1 177 aa11.65□□□□□ -0.54
CNTNAP3-204ENST00000377656 ERC2-IT1O76042 136 aa11.64□□□□□ -0.55
CNTNAP3-204ENST00000377656 STAB1Q9NY15 2570 aa11.64□□□□□ -0.55
CNTNAP3-204ENST00000377656 PLA2G2DQ9UNK4 145 aa11.62□□□□□ -0.55
CNTNAP3-204ENST00000377656 C4orf26Q17RF5 130 aa11.62□□□□□ -0.55
CNTNAP3-204ENST00000377656 PRR15Q8IV56 129 aa11.62□□□□□ -0.55
CNTNAP3-204ENST00000377656 AKAP13Q12802 2813 aa11.6□□□□□ -0.55
CNTNAP3-204ENST00000377656 KRTAP1-1Q07627 177 aa11.59□□□□□ -0.55
CNTNAP3-204ENST00000377656 C8orf17Q9NRJ1 99 aa11.59□□□□□ -0.55
CNTNAP3-204ENST00000377656 IGLV8-61A0A075B6I0 122 aa11.59□□□□□ -0.55
CNTNAP3-204ENST00000377656 TRANK1O15050 2925 aa11.58□□□□□ -0.56
CNTNAP3-204ENST00000377656 LINC00304Q8N9R0 145 aa11.57□□□□□ -0.56
CNTNAP3-204ENST00000377656 MGAQ8IWI9 3026 aa11.57□□□□□ -0.56
CNTNAP3-204ENST00000377656 J3QL48 77 aa11.56□□□□□ -0.56
CNTNAP3-204ENST00000377656 DSCR10P59022 87 aa11.55□□□□□ -0.56
CNTNAP3-204ENST00000377656 A0A1B0GVX0 72 aa11.55□□□□□ -0.56
CNTNAP3-204ENST00000377656 LINC01600Q96MT4 127 aa11.54□□□□□ -0.56
CNTNAP3-204ENST00000377656 A0A0G2JQZ4 141 aa11.54□□□□□ -0.56
CNTNAP3-204ENST00000377656 A0A1W2PNN7 141 aa11.54□□□□□ -0.56
CNTNAP3-204ENST00000377656 WDFY4Q6ZS81 3184 aa11.53□□□□□ -0.56
CNTNAP3-204ENST00000377656 PRUNE2Q8WUY3 3088 aa11.53□□□□□ -0.56
CNTNAP3-204ENST00000377656 CASC10Q5T4H9 136 aa11.53□□□□□ -0.56
CNTNAP3-204ENST00000377656 COA5Q86WW8 74 aa11.53□□□□□ -0.56
CNTNAP3-204ENST00000377656 APLNQ9ULZ1 77 aa11.53□□□□□ -0.56
CNTNAP3-204ENST00000377656 CNBPP62633 177 aaKnown RBP11.52□□□□□ -0.57
CNTNAP3-204ENST00000377656 IGLV7-43P04211 117 aa11.5□□□□□ -0.57
CNTNAP3-204ENST00000377656 KLKP1Q107X0 134 aa11.5□□□□□ -0.57
CNTNAP3-204ENST00000377656 PSORS1C2Q9UIG4 136 aa11.5□□□□□ -0.57
CNTNAP3-204ENST00000377656 ANAPC11Q9NYG5 84 aa11.49□□□□□ -0.57
CNTNAP3-204ENST00000377656 SMR3BP02814 79 aaPredicted RBP11.49□□□□□ -0.57
CNTNAP3-204ENST00000377656 OBSCN-AS1Q96MR7 158 aa11.49□□□□□ -0.57
CNTNAP3-204ENST00000377656 SETXQ7Z333 2677 aaKnown RBP11.48□□□□□ -0.57
CNTNAP3-204ENST00000377656 UNC80Q8N2C7 3258 aa11.48□□□□□ -0.57
CNTNAP3-204ENST00000377656 TEP1Q99973 2627 aaKnown RBP11.46□□□□□ -0.57
CNTNAP3-204ENST00000377656 A8MUN3 132 aa11.46□□□□□ -0.58
CNTNAP3-204ENST00000377656 SPRR4Q96PI1 79 aa11.46□□□□□ -0.58
CNTNAP3-204ENST00000377656 MAP1AP78559 2803 aaPredicted RBP11.46□□□□□ -0.58
CNTNAP3-204ENST00000377656 A0A1W2PNM2 257 aa11.44□□□□□ -0.58
CNTNAP3-204ENST00000377656 CHD6Q8TD26 2715 aa11.43□□□□□ -0.58
CNTNAP3-204ENST00000377656 XIRP2A4UGR9 3374 aa11.43□□□□□ -0.58
CNTNAP3-204ENST00000377656 FAM104AQ969W3 186 aa11.43□□□□□ -0.58
CNTNAP3-204ENST00000377656 CYP4F30PQ9H0H9 118 aa11.43□□□□□ -0.58
CNTNAP3-204ENST00000377656 LINC00336Q6ZUF6 198 aa11.42□□□□□ -0.58
CNTNAP3-204ENST00000377656 UQCR11O14957 56 aa11.42□□□□□ -0.58
CNTNAP3-204ENST00000377656 C9orf92A6NGG3 77 aa11.41□□□□□ -0.58
CNTNAP3-204ENST00000377656 COX6B2Q6YFQ2 88 aa11.41□□□□□ -0.58
CNTNAP3-204ENST00000377656 TEX15Q9BXT5 2789 aa11.39□□□□□ -0.59
CNTNAP3-204ENST00000377656 TRIOO75962 3097 aa11.39□□□□□ -0.59
CNTNAP3-204ENST00000377656 IGLV5-37A0A075B6J1 123 aa11.38□□□□□ -0.59
CNTNAP3-204ENST00000377656 IGLV5-48A0A075B6I7 105 aa11.37□□□□□ -0.59
CNTNAP3-204ENST00000377656 H7BZZ5 65 aa11.35□□□□□ -0.59
CNTNAP3-204ENST00000377656 ZNF292O60281 2723 aa11.35□□□□□ -0.59
CNTNAP3-204ENST00000377656 CR1P17927 2039 aa11.34□□□□□ -0.59
CNTNAP3-204ENST00000377656 VPS13AQ96RL7 3174 aa11.33□□□□□ -0.6
CNTNAP3-204ENST00000377656 COL6A5A8TX70 2615 aa11.31□□□□□ -0.6
CNTNAP3-204ENST00000377656 WIPF1O43516 503 aa11.27□□□□□ -0.61
CNTNAP3-204ENST00000377656 TNP2Q05952 138 aa11.27□□□□□ -0.61
CNTNAP3-204ENST00000377656 MIR22HGQ0VDD5 57 aa11.26□□□□□ -0.61
CNTNAP3-204ENST00000377656 NBEAL1Q6ZS30 2694 aa11.26□□□□□ -0.61
CNTNAP3-204ENST00000377656 NOTCH1P46531 2555 aa11.24□□□□□ -0.61
CNTNAP3-204ENST00000377656 DSPP15924 2871 aaKnown RBP11.23□□□□□ -0.61
CNTNAP3-204ENST00000377656 SPANXA2-OT1Q8N9U9 137 aa11.22□□□□□ -0.61
CNTNAP3-204ENST00000377656 UNC79Q9P2D8 2635 aa11.21□□□□□ -0.61
CNTNAP3-204ENST00000377656 SPINT4Q6UDR6 99 aa11.2□□□□□ -0.62
CNTNAP3-204ENST00000377656 RBM12B-AS1Q9P1G2 102 aa11.2□□□□□ -0.62
CNTNAP3-204ENST00000377656 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.18□□□□□ -0.62
CNTNAP3-204ENST00000377656 CD164Q04900 197 aa11.17□□□□□ -0.62
CNTNAP3-204ENST00000377656 FREM2Q5SZK8 3169 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 1472.1 ms