RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 TRBV10-3A0A0K0K1G6 114 aa6.62□□□□□ -1.35
PDPN-203ENST00000376061 A0A1B0GVY2 172 aa6.62□□□□□ -1.35
PDPN-203ENST00000376061 H3BUT2 72 aa6.62□□□□□ -1.35
PDPN-203ENST00000376061 S100A7L2Q5SY68 101 aa6.62□□□□□ -1.35
PDPN-203ENST00000376061 C7orf33Q8WU49 177 aa6.62□□□□□ -1.35
PDPN-203ENST00000376061 M0QXV9 152 aa6.61□□□□□ -1.35
PDPN-203ENST00000376061 LCE4AQ5TA78 99 aa6.61□□□□□ -1.35
PDPN-203ENST00000376061 SMIM11BQ8TCY0 68 aa6.61□□□□□ -1.35
PDPN-203ENST00000376061 TMEM126AQ9H061 195 aa6.61□□□□□ -1.35
PDPN-203ENST00000376061 C22orf24Q9Y442 160 aa6.61□□□□□ -1.35
PDPN-203ENST00000376061 A0A1W2PPM0 123 aa6.6□□□□□ -1.35
PDPN-203ENST00000376061 TRIAP1O43715 76 aa6.6□□□□□ -1.35
PDPN-203ENST00000376061 KRTAP10-1P60331 282 aa6.6□□□□□ -1.35
PDPN-203ENST00000376061 MRPL55Q7Z7F7 128 aaKnown RBP6.6□□□□□ -1.35
PDPN-203ENST00000376061 KRTAP4-5Q9BYR2 181 aa6.6□□□□□ -1.35
PDPN-203ENST00000376061 A0A1B0GV90 55 aa6.59□□□□□ -1.35
PDPN-203ENST00000376061 RPL28P46779 137 aaKnown RBP6.59□□□□□ -1.35
PDPN-203ENST00000376061 PSMB2P49721 201 aa6.59□□□□□ -1.35
PDPN-203ENST00000376061 PKHD1P08F94 4074 aa6.59□□□□□ -1.36
PDPN-203ENST00000376061 TRAV23DV6A0A075B6W5 121 aa6.58□□□□□ -1.36
PDPN-203ENST00000376061 A0A087WYN8 130 aa6.58□□□□□ -1.36
PDPN-203ENST00000376061 EPM2AB3EWF7 344 aa6.58□□□□□ -1.36
PDPN-203ENST00000376061 LINC00167Q96N53 147 aa6.58□□□□□ -1.36
PDPN-203ENST00000376061 RPL37AP8A6NKH3 93 aa6.57□□□□□ -1.36
PDPN-203ENST00000376061 SEC61GP60059 68 aa6.57□□□□□ -1.36
PDPN-203ENST00000376061 Q6ZSA8 131 aa6.57□□□□□ -1.36
PDPN-203ENST00000376061 PHF5AQ7RTV0 110 aaKnown RBP6.57□□□□□ -1.36
PDPN-203ENST00000376061 PLAC8Q9NZF1 115 aa6.57□□□□□ -1.36
PDPN-203ENST00000376061 IGLV1-50A0A075B6I6 118 aa6.57□□□□□ -1.36
PDPN-203ENST00000376061 FABP2P12104 132 aa6.57□□□□□ -1.36
PDPN-203ENST00000376061 C6orf99Q4VX62 202 aa6.57□□□□□ -1.36
PDPN-203ENST00000376061 LYRM7Q5U5X0 104 aa6.57□□□□□ -1.36
PDPN-203ENST00000376061 DPH3Q96FX2 82 aa6.57□□□□□ -1.36
PDPN-203ENST00000376061 KCNQ1DNQ9H478 68 aa6.57□□□□□ -1.36
PDPN-203ENST00000376061 RYR3Q15413 4870 aa6.56□□□□□ -1.36
PDPN-203ENST00000376061 B5MCH6 92 aa6.56□□□□□ -1.36
PDPN-203ENST00000376061 PRYO14603 147 aa6.56□□□□□ -1.36
PDPN-203ENST00000376061 DIRC1Q969H9 104 aa6.56□□□□□ -1.36
PDPN-203ENST00000376061 ZNF73O43830 326 aaPredicted RBP6.55□□□□□ -1.36
PDPN-203ENST00000376061 COX6CP09669 75 aa6.55□□□□□ -1.36
PDPN-203ENST00000376061 VAMP3Q15836 100 aa6.55□□□□□ -1.36
PDPN-203ENST00000376061 KRTAP11-1Q8IUC1 163 aa6.55□□□□□ -1.36
PDPN-203ENST00000376061 SPCS1Q9Y6A9 102 aa6.55□□□□□ -1.36
PDPN-203ENST00000376061 DNAH8Q96JB1 4490 aa6.54□□□□□ -1.36
PDPN-203ENST00000376061 SCGB1C2P0DMR2 95 aa6.54□□□□□ -1.36
PDPN-203ENST00000376061 CLEC2BQ92478 149 aa6.54□□□□□ -1.36
PDPN-203ENST00000376061 K7EP34 96 aa6.53□□□□□ -1.36
PDPN-203ENST00000376061 TCL1BO95988 128 aa6.53□□□□□ -1.36
PDPN-203ENST00000376061 SPRR1AP35321 89 aa6.53□□□□□ -1.36
PDPN-203ENST00000376061 UBE2BP63146 152 aa6.53□□□□□ -1.36
PDPN-203ENST00000376061 SCXQ7RTU7 201 aa6.53□□□□□ -1.36
PDPN-203ENST00000376061 CIRBP-AS1Q8TBR5 109 aa6.53□□□□□ -1.36
PDPN-203ENST00000376061 FAM218AQ96MZ4 157 aa6.53□□□□□ -1.36
PDPN-203ENST00000376061 KRTAP4-16G5E9R7 235 aaPredicted RBP6.52□□□□□ -1.37
PDPN-203ENST00000376061 HAMPP81172 84 aa6.52□□□□□ -1.37
PDPN-203ENST00000376061 REG3GQ6UW15 175 aa6.52□□□□□ -1.37
PDPN-203ENST00000376061 TRBV20-1A0A075B6N2 111 aa6.51□□□□□ -1.37
PDPN-203ENST00000376061 TRBV7-6A0A0J9YX20 115 aa6.51□□□□□ -1.37
PDPN-203ENST00000376061 H0YGX0 51 aa6.51□□□□□ -1.37
PDPN-203ENST00000376061 LST1O00453 97 aa6.51□□□□□ -1.37
PDPN-203ENST00000376061 COX7BP24311 80 aa6.51□□□□□ -1.37
PDPN-203ENST00000376061 ELOF1P60002 83 aaKnown RBP6.51□□□□□ -1.37
PDPN-203ENST00000376061 KRTAP17-1Q9BYP8 105 aa6.51□□□□□ -1.37
PDPN-203ENST00000376061 LRP1BQ9NZR2 4599 aa6.5□□□□□ -1.37
PDPN-203ENST00000376061 DYNC1H1Q14204 4646 aaKnown RBP6.5□□□□□ -1.37
PDPN-203ENST00000376061 ATXN8Q156A1 80 aa6.5□□□□□ -1.37
PDPN-203ENST00000376061 GTF2H5Q6ZYL4 71 aa6.5□□□□□ -1.37
PDPN-203ENST00000376061 ETDCA0A1B0GVM5 59 aa6.49□□□□□ -1.37
PDPN-203ENST00000376061 H3BMG7 143 aa6.48□□□□□ -1.37
PDPN-203ENST00000376061 LINC00575Q6W349 94 aa6.48□□□□□ -1.37
PDPN-203ENST00000376061 Q6ZRX8 168 aa6.48□□□□□ -1.37
PDPN-203ENST00000376061 A0A0A0MQY5 61 aa6.47□□□□□ -1.37
PDPN-203ENST00000376061 TRACP01848 142 aa6.47□□□□□ -1.37
PDPN-203ENST00000376061 UBE2V1Q13404 147 aa6.47□□□□□ -1.37
PDPN-203ENST00000376061 BCE1O60756 84 aa6.46□□□□□ -1.37
PDPN-203ENST00000376061 FAM19A1Q7Z5A9 133 aa6.46□□□□□ -1.37
PDPN-203ENST00000376061 Q9BRP9 147 aa6.46□□□□□ -1.37
PDPN-203ENST00000376061 PSORS1C2Q9UIG4 136 aa6.46□□□□□ -1.37
PDPN-203ENST00000376061 A0A1B0GX51 115 aa6.45□□□□□ -1.38
PDPN-203ENST00000376061 PRLHP81277 87 aa6.45□□□□□ -1.38
PDPN-203ENST00000376061 MTURNQ8N3F0 131 aa6.45□□□□□ -1.38
PDPN-203ENST00000376061 hADV29S1A0JD25 119 aa6.44□□□□□ -1.38
PDPN-203ENST00000376061 C9JAW5 83 aa6.44□□□□□ -1.38
PDPN-203ENST00000376061 KRTAP13-1Q8IUC0 172 aa6.44□□□□□ -1.38
PDPN-203ENST00000376061 APOBP04114 4563 aaKnown RBP6.44□□□□□ -1.38
PDPN-203ENST00000376061 H0Y9J4 135 aa6.44□□□□□ -1.38
PDPN-203ENST00000376061 SLC25A20O43772 301 aa6.44□□□□□ -1.38
PDPN-203ENST00000376061 DNAL4O96015 105 aa6.44□□□□□ -1.38
PDPN-203ENST00000376061 XGP55808 180 aa6.44□□□□□ -1.38
PDPN-203ENST00000376061 SMCR5Q8TEV8 140 aa6.44□□□□□ -1.38
PDPN-203ENST00000376061 DHRS4-AS1Q9P1J3 65 aa6.44□□□□□ -1.38
PDPN-203ENST00000376061 PRO0461Q9UI25 63 aa6.44□□□□□ -1.38
PDPN-203ENST00000376061 INAFM2P0DMQ5 153 aa6.43□□□□□ -1.38
PDPN-203ENST00000376061 UBE2AP49459 152 aa6.43□□□□□ -1.38
PDPN-203ENST00000376061 C1orf137Q5JT78 98 aa6.43□□□□□ -1.38
PDPN-203ENST00000376061 ERC2-IT1O76042 136 aa6.42□□□□□ -1.38
PDPN-203ENST00000376061 SNCGO76070 127 aa6.42□□□□□ -1.38
PDPN-203ENST00000376061 Q6ZQY7 126 aa6.42□□□□□ -1.38
PDPN-203ENST00000376061 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.41□□□□□ -1.38
PDPN-203ENST00000376061 HIGD2AQ9BW72 106 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms