RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 DNAJC9-AS1A6NH13 148 aa8.63□□□□□ -1.03
PRPF4-201ENST00000374198 IGHV4-30-4P0DP06 118 aa8.63□□□□□ -1.03
PRPF4-201ENST00000374198 HIGD2BQ4VC39 106 aa8.63□□□□□ -1.03
PRPF4-201ENST00000374198 KLK12Q9UKR0 248 aa8.63□□□□□ -1.03
PRPF4-201ENST00000374198 FBN1P35555 2871 aaKnown RBP8.63□□□□□ -1.03
PRPF4-201ENST00000374198 A0A0J9YWU9 116 aa8.62□□□□□ -1.03
PRPF4-201ENST00000374198 Q6YL49 198 aa8.62□□□□□ -1.03
PRPF4-201ENST00000374198 CSNK1G2-AS1Q8NCQ2 148 aa8.61□□□□□ -1.03
PRPF4-201ENST00000374198 ZCCHC13Q8WW36 166 aaKnown RBP8.61□□□□□ -1.03
PRPF4-201ENST00000374198 C3orf84H3BNL1 204 aa8.61□□□□□ -1.03
PRPF4-201ENST00000374198 SPAG11BQ08648 103 aa8.61□□□□□ -1.03
PRPF4-201ENST00000374198 DEFB130BP0DP73 79 aa8.61□□□□□ -1.03
PRPF4-201ENST00000374198 DEFB130AP0DP74 79 aa8.61□□□□□ -1.03
PRPF4-201ENST00000374198 REG3AQ06141 175 aa8.61□□□□□ -1.03
PRPF4-201ENST00000374198 RETNQ9HD89 108 aa8.61□□□□□ -1.03
PRPF4-201ENST00000374198 A0A096LPF7 62 aa8.6□□□□□ -1.03
PRPF4-201ENST00000374198 ANGP03950 147 aaKnown RBP8.59□□□□□ -1.03
PRPF4-201ENST00000374198 WFDC10AQ9H1F0 79 aa8.59□□□□□ -1.03
PRPF4-201ENST00000374198 CYP4F30PQ9H0H9 118 aa8.58□□□□□ -1.04
PRPF4-201ENST00000374198 PSCAO43653 123 aa8.58□□□□□ -1.04
PRPF4-201ENST00000374198 XAGE1AQ9HD64 81 aa8.58□□□□□ -1.04
PRPF4-201ENST00000374198 A8MUN3 132 aa8.57□□□□□ -1.04
PRPF4-201ENST00000374198 SYCNQ0VAF6 134 aa8.57□□□□□ -1.04
PRPF4-201ENST00000374198 STAB1Q9NY15 2570 aa8.56□□□□□ -1.04
PRPF4-201ENST00000374198 LINC00528Q8N1L1 170 aa8.56□□□□□ -1.04
PRPF4-201ENST00000374198 A8MU10 97 aa8.55□□□□□ -1.04
PRPF4-201ENST00000374198 CMC4P56277 68 aaPredicted RBP8.55□□□□□ -1.04
PRPF4-201ENST00000374198 GVQW2A0A096LPI5 108 aaPredicted RBP8.55□□□□□ -1.04
PRPF4-201ENST00000374198 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.54□□□□□ -1.04
PRPF4-201ENST00000374198 ETDCA0A1B0GVM5 59 aa8.54□□□□□ -1.04
PRPF4-201ENST00000374198 PRR4Q16378 134 aa8.54□□□□□ -1.04
PRPF4-201ENST00000374198 PRO0255Q9UI72 69 aa8.54□□□□□ -1.04
PRPF4-201ENST00000374198 MRPL55Q7Z7F7 128 aaKnown RBP8.53□□□□□ -1.04
PRPF4-201ENST00000374198 C6orf48Q9UBA6 75 aa8.53□□□□□ -1.04
PRPF4-201ENST00000374198 Q5VV11 94 aa8.53□□□□□ -1.04
PRPF4-201ENST00000374198 UBE2BP63146 152 aa8.52□□□□□ -1.05
PRPF4-201ENST00000374198 LYRM9A8MSI8 78 aa8.52□□□□□ -1.05
PRPF4-201ENST00000374198 C19orf73Q9NVV2 129 aa8.52□□□□□ -1.05
PRPF4-201ENST00000374198 VPREB1P12018 145 aa8.51□□□□□ -1.05
PRPF4-201ENST00000374198 KTN1-AS1Q86SY8 53 aa8.5□□□□□ -1.05
PRPF4-201ENST00000374198 LINC00588Q9Y4M8 146 aa8.5□□□□□ -1.05
PRPF4-201ENST00000374198 KPRPQ5T749 579 aaPredicted RBP8.5□□□□□ -1.05
PRPF4-201ENST00000374198 IGLV5-48A0A075B6I7 105 aa8.5□□□□□ -1.05
PRPF4-201ENST00000374198 M0R378 163 aa8.5□□□□□ -1.05
PRPF4-201ENST00000374198 ST20-AS1Q8NBB2 130 aa8.5□□□□□ -1.05
PRPF4-201ENST00000374198 A0A1B0GW54 56 aa8.49□□□□□ -1.05
PRPF4-201ENST00000374198 PRB2P02812 416 aaPredicted RBP8.49□□□□□ -1.05
PRPF4-201ENST00000374198 NDUFB1O75438 58 aa8.48□□□□□ -1.05
PRPF4-201ENST00000374198 RBM12B-AS1Q9P1G2 102 aa8.48□□□□□ -1.05
PRPF4-201ENST00000374198 UBE2AP49459 152 aa8.48□□□□□ -1.05
PRPF4-201ENST00000374198 DEFB105AQ8NG35 78 aa8.48□□□□□ -1.05
PRPF4-201ENST00000374198 DSCR10P59022 87 aa8.47□□□□□ -1.05
PRPF4-201ENST00000374198 Q8N377 158 aa8.47□□□□□ -1.05
PRPF4-201ENST00000374198 DNHD1Q96M86 4753 aa8.47□□□□□ -1.05
PRPF4-201ENST00000374198 A0A1W2PNM2 257 aa8.46□□□□□ -1.05
PRPF4-201ENST00000374198 C16orf90A8MZG2 172 aa8.46□□□□□ -1.05
PRPF4-201ENST00000374198 CHKB-CPT1BH3BT56 60 aa8.46□□□□□ -1.05
PRPF4-201ENST00000374198 TENM1Q9UKZ4 2725 aa8.46□□□□□ -1.06
PRPF4-201ENST00000374198 K7EQZ3 153 aa8.45□□□□□ -1.06
PRPF4-201ENST00000374198 B9D2Q9BPU9 175 aa8.44□□□□□ -1.06
PRPF4-201ENST00000374198 Q8N9P0 234 aaPredicted RBP8.44□□□□□ -1.06
PRPF4-201ENST00000374198 LIMD2Q9BT23 127 aa8.44□□□□□ -1.06
PRPF4-201ENST00000374198 PRR34Q9NV39 138 aa8.43□□□□□ -1.06
PRPF4-201ENST00000374198 IGLV1-51P01701 117 aa8.42□□□□□ -1.06
PRPF4-201ENST00000374198 HCG22E2RYF7 251 aa8.42□□□□□ -1.06
PRPF4-201ENST00000374198 SPTSSBQ8NFR3 76 aa8.42□□□□□ -1.06
PRPF4-201ENST00000374198 KRTAP10-3P60369 221 aa8.41□□□□□ -1.06
PRPF4-201ENST00000374198 Q8NBF4 154 aa8.41□□□□□ -1.06
PRPF4-201ENST00000374198 C1orf137Q5JT78 98 aa8.41□□□□□ -1.06
PRPF4-201ENST00000374198 ATP11AUNQ6ZP68 121 aa8.41□□□□□ -1.06
PRPF4-201ENST00000374198 CAMK2N2Q96S95 79 aa8.4□□□□□ -1.06
PRPF4-201ENST00000374198 EGFEM1PQ0D2K5 195 aa8.4□□□□□ -1.06
PRPF4-201ENST00000374198 PRR15LQ9BU68 103 aa8.4□□□□□ -1.06
PRPF4-201ENST00000374198 X6R8D5 127 aa8.4□□□□□ -1.06
PRPF4-201ENST00000374198 SPRR4Q96PI1 79 aa8.39□□□□□ -1.07
PRPF4-201ENST00000374198 NDUFS5O43920 106 aa8.39□□□□□ -1.07
PRPF4-201ENST00000374198 MP68P56378 58 aa8.39□□□□□ -1.07
PRPF4-201ENST00000374198 TNP2Q05952 138 aa8.39□□□□□ -1.07
PRPF4-201ENST00000374198 LCA10Q71F78 164 aa8.39□□□□□ -1.07
PRPF4-201ENST00000374198 LINC00208Q96KT6 92 aa8.39□□□□□ -1.07
PRPF4-201ENST00000374198 KCNQ1DNQ9H478 68 aa8.39□□□□□ -1.07
PRPF4-201ENST00000374198 ANK2Q01484 3957 aa8.38□□□□□ -1.07
PRPF4-201ENST00000374198 LELP1Q5T871 98 aa8.37□□□□□ -1.07
PRPF4-201ENST00000374198 PHF5AQ7RTV0 110 aaKnown RBP8.37□□□□□ -1.07
PRPF4-201ENST00000374198 SPANXA2-OT1Q8N9U9 137 aa8.37□□□□□ -1.07
PRPF4-201ENST00000374198 A6NN06 94 aa8.36□□□□□ -1.07
PRPF4-201ENST00000374198 Q9BRP9 147 aa8.36□□□□□ -1.07
PRPF4-201ENST00000374198 Q75L30 129 aa8.35□□□□□ -1.07
PRPF4-201ENST00000374198 DHRS4-AS1Q9P1J3 65 aa8.34□□□□□ -1.07
PRPF4-201ENST00000374198 A6NED7 52 aa8.33□□□□□ -1.08
PRPF4-201ENST00000374198 FBN3Q75N90 2809 aa8.33□□□□□ -1.08
PRPF4-201ENST00000374198 DEFB4AO15263 64 aa8.33□□□□□ -1.08
PRPF4-201ENST00000374198 DEFB116Q30KQ4 102 aa8.33□□□□□ -1.08
PRPF4-201ENST00000374198 WFDC13Q8IUB5 93 aa8.32□□□□□ -1.08
PRPF4-201ENST00000374198 MGAM2Q2M2H8 2515 aa8.32□□□□□ -1.08
PRPF4-201ENST00000374198 LOC101927531A0A1B0GV80 90 aa8.32□□□□□ -1.08
PRPF4-201ENST00000374198 Q6ZRX8 168 aa8.31□□□□□ -1.08
PRPF4-201ENST00000374198 NKAPP1Q8N9T2 125 aa8.31□□□□□ -1.08
PRPF4-201ENST00000374198 C7orf33Q8WU49 177 aa8.31□□□□□ -1.08
PRPF4-201ENST00000374198 NBEAL1Q6ZS30 2694 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms