RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 NBEAL1Q6ZS30 2694 aa11.8□□□□□ -0.52
CD40-201ENST00000372276 PRYO14603 147 aa11.8□□□□□ -0.52
CD40-201ENST00000372276 SERP2Q8N6R1 65 aa11.8□□□□□ -0.52
CD40-201ENST00000372276 CXCL6P80162 114 aa11.79□□□□□ -0.52
CD40-201ENST00000372276 CRYGAP11844 174 aa11.78□□□□□ -0.52
CD40-201ENST00000372276 C7orf33Q8WU49 177 aa11.78□□□□□ -0.52
CD40-201ENST00000372276 SS18L2Q9UHA2 77 aa11.78□□□□□ -0.52
CD40-201ENST00000372276 LOC107984640A0A0U1RRK4 108 aa11.77□□□□□ -0.53
CD40-201ENST00000372276 A0A1B0GW54 56 aa11.76□□□□□ -0.53
CD40-201ENST00000372276 Q6ZVQ6 151 aa11.75□□□□□ -0.53
CD40-201ENST00000372276 SERTAD4-AS1Q5TG53 156 aa11.74□□□□□ -0.53
CD40-201ENST00000372276 SMIM20Q8N5G0 67 aa11.74□□□□□ -0.53
CD40-201ENST00000372276 A0A087WVE0 104 aa11.73□□□□□ -0.53
CD40-201ENST00000372276 LINC01547P58512 204 aaPredicted RBP11.73□□□□□ -0.53
CD40-201ENST00000372276 IGLV1-50A0A075B6I6 118 aa11.72□□□□□ -0.53
CD40-201ENST00000372276 SPRR1AP35321 89 aa11.72□□□□□ -0.53
CD40-201ENST00000372276 NOTCH1P46531 2555 aa11.72□□□□□ -0.53
CD40-201ENST00000372276 ETDCA0A1B0GVM5 59 aa11.71□□□□□ -0.54
CD40-201ENST00000372276 HAMPP81172 84 aa11.71□□□□□ -0.54
CD40-201ENST00000372276 Q6ZRX8 168 aa11.71□□□□□ -0.54
CD40-201ENST00000372276 TENM3Q9P273 2699 aa11.7□□□□□ -0.54
CD40-201ENST00000372276 MEGF8Q7Z7M0 2845 aa11.69□□□□□ -0.54
CD40-201ENST00000372276 PRB2P02812 416 aaPredicted RBP11.68□□□□□ -0.54
CD40-201ENST00000372276 FAM19A1Q7Z5A9 133 aa11.68□□□□□ -0.54
CD40-201ENST00000372276 IGLV5-48A0A075B6I7 105 aa11.68□□□□□ -0.54
CD40-201ENST00000372276 KRTAP4-16G5E9R7 235 aaPredicted RBP11.68□□□□□ -0.54
CD40-201ENST00000372276 C14orf177Q52M58 125 aa11.68□□□□□ -0.54
CD40-201ENST00000372276 MRPL55Q7Z7F7 128 aaKnown RBP11.68□□□□□ -0.54
CD40-201ENST00000372276 PKIGQ9Y2B9 76 aa11.68□□□□□ -0.54
CD40-201ENST00000372276 M0R2N4 97 aa11.65□□□□□ -0.54
CD40-201ENST00000372276 CNBPP62633 177 aaKnown RBP11.65□□□□□ -0.54
CD40-201ENST00000372276 CASC10Q5T4H9 136 aa11.65□□□□□ -0.54
CD40-201ENST00000372276 Q8N377 158 aa11.64□□□□□ -0.55
CD40-201ENST00000372276 TRAV7A0A075B6U4 112 aa11.61□□□□□ -0.55
CD40-201ENST00000372276 RPL37AP8A6NKH3 93 aa11.61□□□□□ -0.55
CD40-201ENST00000372276 FUSP35637 526 aaKnown RBP eCLIP11.61□□□□□ -0.55
CD40-201ENST00000372276 UBE2DNLQ8IWF7 75 aa11.61□□□□□ -0.55
CD40-201ENST00000372276 C16orf90A8MZG2 172 aa11.6□□□□□ -0.55
CD40-201ENST00000372276 NREPQ16612 68 aa11.6□□□□□ -0.55
CD40-201ENST00000372276 FAM168BA1KXE4 195 aa11.6□□□□□ -0.55
CD40-201ENST00000372276 PSCAO43653 123 aa11.6□□□□□ -0.55
CD40-201ENST00000372276 TMEM258P61165 79 aa11.6□□□□□ -0.55
CD40-201ENST00000372276 REG3GQ6UW15 175 aa11.6□□□□□ -0.55
CD40-201ENST00000372276 DEFB105AQ8NG35 78 aa11.59□□□□□ -0.55
CD40-201ENST00000372276 APLNQ9ULZ1 77 aa11.59□□□□□ -0.55
CD40-201ENST00000372276 FAM19A5Q7Z5A7 132 aaPredicted RBP11.58□□□□□ -0.56
CD40-201ENST00000372276 B9D2Q9BPU9 175 aa11.58□□□□□ -0.56
CD40-201ENST00000372276 Q9BRP9 147 aa11.58□□□□□ -0.56
CD40-201ENST00000372276 KRTAP7-1Q8IUC3 87 aa11.57□□□□□ -0.56
CD40-201ENST00000372276 HUWE1Q7Z6Z7 4374 aaKnown RBP11.56□□□□□ -0.56
CD40-201ENST00000372276 UBE2BP63146 152 aa11.55□□□□□ -0.56
CD40-201ENST00000372276 TNP2Q05952 138 aa11.55□□□□□ -0.56
CD40-201ENST00000372276 RPS28P62857 69 aaKnown RBP11.53□□□□□ -0.56
CD40-201ENST00000372276 BPY2O14599 106 aa11.52□□□□□ -0.57
CD40-201ENST00000372276 C1orf137Q5JT78 98 aa11.52□□□□□ -0.57
CD40-201ENST00000372276 DNAH1Q9P2D7 4330 aa11.51□□□□□ -0.57
CD40-201ENST00000372276 NUPR2A6NF83 97 aa11.51□□□□□ -0.57
CD40-201ENST00000372276 Q8NBF4 154 aa11.51□□□□□ -0.57
CD40-201ENST00000372276 F8WEM9 126 aa11.5□□□□□ -0.57
CD40-201ENST00000372276 SPRR4Q96PI1 79 aa11.49□□□□□ -0.57
CD40-201ENST00000372276 A0A096LNI7 61 aa11.49□□□□□ -0.57
CD40-201ENST00000372276 KRTAP1-5Q9BYS1 174 aa11.49□□□□□ -0.57
CD40-201ENST00000372276 LINC00474Q9P2X8 69 aa11.49□□□□□ -0.57
CD40-201ENST00000372276 PRKDCP78527 4128 aaKnown RBP11.49□□□□□ -0.57
CD40-201ENST00000372276 J3KT08 172 aa11.48□□□□□ -0.57
CD40-201ENST00000372276 H0Y9J4 135 aa11.47□□□□□ -0.57
CD40-201ENST00000372276 ERC2-IT1O76042 136 aa11.46□□□□□ -0.57
CD40-201ENST00000372276 ST20-AS1Q8NBB2 130 aa11.46□□□□□ -0.57
CD40-201ENST00000372276 A0A1W2PNM2 257 aa11.45□□□□□ -0.58
CD40-201ENST00000372276 C3orf84H3BNL1 204 aa11.45□□□□□ -0.58
CD40-201ENST00000372276 KLKP1Q107X0 134 aa11.45□□□□□ -0.58
CD40-201ENST00000372276 SCXQ7RTU7 201 aa11.45□□□□□ -0.58
CD40-201ENST00000372276 NDUFC1O43677 76 aa11.44□□□□□ -0.58
CD40-201ENST00000372276 IGKV4-1P06312 121 aa11.44□□□□□ -0.58
CD40-201ENST00000372276 C20orf197Q8N268 126 aa11.44□□□□□ -0.58
CD40-201ENST00000372276 C9orf163Q8N9P6 203 aa11.43□□□□□ -0.58
CD40-201ENST00000372276 IGLV8-61A0A075B6I0 122 aa11.42□□□□□ -0.58
CD40-201ENST00000372276 IGKV2-24A0A0C4DH68 120 aa11.42□□□□□ -0.58
CD40-201ENST00000372276 NBDYA0A0U1RRE5 68 aa11.42□□□□□ -0.58
CD40-201ENST00000372276 A0A1W2PNN7 141 aa11.42□□□□□ -0.58
CD40-201ENST00000372276 SMIM29Q86T20 159 aa11.41□□□□□ -0.58
CD40-201ENST00000372276 CYSTM1Q9H1C7 97 aa11.39□□□□□ -0.59
CD40-201ENST00000372276 DPH3Q96FX2 82 aa11.38□□□□□ -0.59
CD40-201ENST00000372276 LRCOL1A6NCL2 159 aa11.37□□□□□ -0.59
CD40-201ENST00000372276 SPRR1BP22528 89 aa11.37□□□□□ -0.59
CD40-201ENST00000372276 LINC00476Q8WZB0 136 aa11.37□□□□□ -0.59
CD40-201ENST00000372276 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.36□□□□□ -0.59
CD40-201ENST00000372276 TGP01266 2768 aa11.36□□□□□ -0.59
CD40-201ENST00000372276 DYNC2H1Q8NCM8 4307 aaKnown RBP11.35□□□□□ -0.59
CD40-201ENST00000372276 UBE2AP49459 152 aa11.33□□□□□ -0.6
CD40-201ENST00000372276 PRLHP81277 87 aa11.33□□□□□ -0.6
CD40-201ENST00000372276 HIGD2AQ9BW72 106 aa11.33□□□□□ -0.6
CD40-201ENST00000372276 DNAH9Q9NYC9 4486 aa11.33□□□□□ -0.6
CD40-201ENST00000372276 FAM236DA0A1B0GTK5 79 aa11.32□□□□□ -0.6
CD40-201ENST00000372276 FAM236CP0DP71 79 aa11.32□□□□□ -0.6
CD40-201ENST00000372276 ATP5EP56381 51 aaPredicted RBP11.32□□□□□ -0.6
CD40-201ENST00000372276 H7BZZ5 65 aa11.31□□□□□ -0.6
CD40-201ENST00000372276 IGFL1Q6UW32 110 aa11.31□□□□□ -0.6
CD40-201ENST00000372276 COL7A1Q02388 2944 aa11.31□□□□□ -0.6
CD40-201ENST00000372276 Q6ZRN7 208 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms