RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 SPANXB1Q9NS25 103 aaPredicted RBP10.1□□□□□ -0.79
TMEM53-203ENST00000372242 IGKV2-28A0A075B6P5 120 aa10.1□□□□□ -0.79
TMEM53-203ENST00000372242 J3QR89 54 aa10.1□□□□□ -0.79
TMEM53-203ENST00000372242 IGKV2D-28P01615 120 aa10.1□□□□□ -0.79
TMEM53-203ENST00000372242 TMEM238LA0A1B0GVL6 79 aa10.08□□□□□ -0.8
TMEM53-203ENST00000372242 A6NJY4 79 aa10.08□□□□□ -0.8
TMEM53-203ENST00000372242 M0R378 163 aa10.08□□□□□ -0.8
TMEM53-203ENST00000372242 SRSF9Q13242 221 aaKnown RBP eCLIP10.08□□□□□ -0.8
TMEM53-203ENST00000372242 VPS13BQ7Z7G8 4022 aa10.08□□□□□ -0.8
TMEM53-203ENST00000372242 MUSTN1Q8IVN3 82 aa10.07□□□□□ -0.8
TMEM53-203ENST00000372242 IGLV1-50A0A075B6I6 118 aa10.07□□□□□ -0.8
TMEM53-203ENST00000372242 NDUFC2O95298 119 aa10.07□□□□□ -0.8
TMEM53-203ENST00000372242 C1orf137Q5JT78 98 aa10.07□□□□□ -0.8
TMEM53-203ENST00000372242 SIGMAR1Q99720 223 aa10.06□□□□□ -0.8
TMEM53-203ENST00000372242 IFITM1P13164 125 aa10.05□□□□□ -0.8
TMEM53-203ENST00000372242 TRBV10-3A0A0K0K1G6 114 aa10.03□□□□□ -0.8
TMEM53-203ENST00000372242 TRBV10-2A0A0K0K1G8 114 aa10.03□□□□□ -0.8
TMEM53-203ENST00000372242 COPS9Q8WXC6 57 aa10.03□□□□□ -0.8
TMEM53-203ENST00000372242 IGLV7-43P04211 117 aa10□□□□□ -0.81
TMEM53-203ENST00000372242 S100A7L2Q5SY68 101 aa10□□□□□ -0.81
TMEM53-203ENST00000372242 REG3GQ6UW15 175 aa10□□□□□ -0.81
TMEM53-203ENST00000372242 TMEM126AQ9H061 195 aa10□□□□□ -0.81
TMEM53-203ENST00000372242 PPDPFQ9H3Y8 114 aa10□□□□□ -0.81
TMEM53-203ENST00000372242 PRO0461Q9UI25 63 aa10□□□□□ -0.81
TMEM53-203ENST00000372242 INAFM2P0DMQ5 153 aa9.99□□□□□ -0.81
TMEM53-203ENST00000372242 LINC00337Q8N6G1 96 aa9.99□□□□□ -0.81
TMEM53-203ENST00000372242 OR13C6PQ8NH95 151 aa9.99□□□□□ -0.81
TMEM53-203ENST00000372242 BCE1O60756 84 aa9.98□□□□□ -0.81
TMEM53-203ENST00000372242 IGLV6-57P01721 117 aa9.98□□□□□ -0.81
TMEM53-203ENST00000372242 ABCA13Q86UQ4 5058 aa9.98□□□□□ -0.81
TMEM53-203ENST00000372242 A4D1N5 150 aa9.98□□□□□ -0.81
TMEM53-203ENST00000372242 H3BMG7 143 aa9.98□□□□□ -0.81
TMEM53-203ENST00000372242 KCNQ1DNQ9H478 68 aa9.98□□□□□ -0.81
TMEM53-203ENST00000372242 TSPAN13O95857 204 aa9.97□□□□□ -0.81
TMEM53-203ENST00000372242 CFC1BP0CG36 223 aa9.96□□□□□ -0.81
TMEM53-203ENST00000372242 CFC1P0CG37 223 aa9.96□□□□□ -0.81
TMEM53-203ENST00000372242 PRYO14603 147 aa9.96□□□□□ -0.82
TMEM53-203ENST00000372242 ETDBQ3ZM63 59 aa9.95□□□□□ -0.82
TMEM53-203ENST00000372242 LYRM7Q5U5X0 104 aa9.95□□□□□ -0.82
TMEM53-203ENST00000372242 FAM19A1Q7Z5A9 133 aa9.95□□□□□ -0.82
TMEM53-203ENST00000372242 A0A1B0GV72 72 aa9.94□□□□□ -0.82
TMEM53-203ENST00000372242 PRLHP81277 87 aa9.94□□□□□ -0.82
TMEM53-203ENST00000372242 A0A0B4J2C4 111 aa9.93□□□□□ -0.82
TMEM53-203ENST00000372242 UBE2AP49459 152 aa9.93□□□□□ -0.82
TMEM53-203ENST00000372242 SPINK6Q6UWN8 80 aa9.93□□□□□ -0.82
TMEM53-203ENST00000372242 PRO1854Q9UHT4 67 aa9.93□□□□□ -0.82
TMEM53-203ENST00000372242 FLG2Q5D862 2391 aaPredicted RBP9.93□□□□□ -0.82
TMEM53-203ENST00000372242 TRAV23DV6A0A075B6W5 121 aa9.93□□□□□ -0.82
TMEM53-203ENST00000372242 ZNF861PO60384 105 aa9.93□□□□□ -0.82
TMEM53-203ENST00000372242 SPRR1AP35321 89 aa9.93□□□□□ -0.82
TMEM53-203ENST00000372242 PCLOQ9Y6V0 5065 aa9.93□□□□□ -0.82
TMEM53-203ENST00000372242 KRTAP4-16G5E9R7 235 aaPredicted RBP9.91□□□□□ -0.82
TMEM53-203ENST00000372242 RPL28P46779 137 aaKnown RBP9.91□□□□□ -0.82
TMEM53-203ENST00000372242 KRTAP13-1Q8IUC0 172 aa9.91□□□□□ -0.82
TMEM53-203ENST00000372242 TRBV20-1A0A075B6N2 111 aa9.9□□□□□ -0.82
TMEM53-203ENST00000372242 TRAV13-2A0A0B4J235 113 aa9.9□□□□□ -0.82
TMEM53-203ENST00000372242 ETDCA0A1B0GVM5 59 aa9.9□□□□□ -0.82
TMEM53-203ENST00000372242 ZNF73O43830 326 aaPredicted RBP9.9□□□□□ -0.82
TMEM53-203ENST00000372242 MTURNQ8N3F0 131 aa9.89□□□□□ -0.83
TMEM53-203ENST00000372242 DIRC1Q969H9 104 aa9.89□□□□□ -0.83
TMEM53-203ENST00000372242 H0Y9J4 135 aa9.88□□□□□ -0.83
TMEM53-203ENST00000372242 SMCPP49901 116 aaPredicted RBP9.87□□□□□ -0.83
TMEM53-203ENST00000372242 B5MCH6 92 aa9.86□□□□□ -0.83
TMEM53-203ENST00000372242 PSMB2P49721 201 aa9.86□□□□□ -0.83
TMEM53-203ENST00000372242 PPDPFLQ8WWR9 84 aa9.86□□□□□ -0.83
TMEM53-203ENST00000372242 HIGD2AQ9BW72 106 aa9.86□□□□□ -0.83
TMEM53-203ENST00000372242 MYCBP2O75592 4640 aa9.86□□□□□ -0.83
TMEM53-203ENST00000372242 C6orf99Q4VX62 202 aa9.86□□□□□ -0.83
TMEM53-203ENST00000372242 PKHD1L1Q86WI1 4243 aa9.85□□□□□ -0.83
TMEM53-203ENST00000372242 TCL1BO95988 128 aa9.85□□□□□ -0.83
TMEM53-203ENST00000372242 RPL13AP40429 203 aaKnown RBP9.85□□□□□ -0.83
TMEM53-203ENST00000372242 SMIM11BQ8TCY0 68 aa9.85□□□□□ -0.83
TMEM53-203ENST00000372242 Q6ZRX8 168 aa9.84□□□□□ -0.83
TMEM53-203ENST00000372242 TEN1Q86WV5 123 aa9.84□□□□□ -0.83
TMEM53-203ENST00000372242 CDIP1Q9H305 208 aa9.84□□□□□ -0.83
TMEM53-203ENST00000372242 Q9BRP9 147 aa9.83□□□□□ -0.84
TMEM53-203ENST00000372242 H7C2G1 150 aa9.82□□□□□ -0.84
TMEM53-203ENST00000372242 SMCR5Q8TEV8 140 aa9.82□□□□□ -0.84
TMEM53-203ENST00000372242 LRP1Q07954 4544 aaKnown RBP9.81□□□□□ -0.84
TMEM53-203ENST00000372242 SCGB1C2P0DMR2 95 aa9.81□□□□□ -0.84
TMEM53-203ENST00000372242 ERC2-IT1O76042 136 aa9.79□□□□□ -0.84
TMEM53-203ENST00000372242 KRTAP1-4P0C5Y4 121 aa9.79□□□□□ -0.84
TMEM53-203ENST00000372242 COX7BP24311 80 aa9.79□□□□□ -0.84
TMEM53-203ENST00000372242 LINC01600Q96MT4 127 aa9.79□□□□□ -0.84
TMEM53-203ENST00000372242 ELOF1P60002 83 aaKnown RBP9.79□□□□□ -0.84
TMEM53-203ENST00000372242 Q1RN00 199 aa9.77□□□□□ -0.84
TMEM53-203ENST00000372242 ANAPC11Q9NYG5 84 aa9.77□□□□□ -0.84
TMEM53-203ENST00000372242 TRBV7-6A0A0J9YX20 115 aa9.77□□□□□ -0.85
TMEM53-203ENST00000372242 KRTAP29-1A8MX34 341 aaPredicted RBP9.77□□□□□ -0.85
TMEM53-203ENST00000372242 TRIAP1O43715 76 aa9.77□□□□□ -0.85
TMEM53-203ENST00000372242 OXTP01178 125 aa9.77□□□□□ -0.85
TMEM53-203ENST00000372242 ATXN8Q156A1 80 aa9.77□□□□□ -0.85
TMEM53-203ENST00000372242 MT-ATP8P03928 68 aa9.75□□□□□ -0.85
TMEM53-203ENST00000372242 ANKRD29Q8N6D5 301 aa9.74□□□□□ -0.85
TMEM53-203ENST00000372242 PRR26Q8N8Z3 221 aa9.74□□□□□ -0.85
TMEM53-203ENST00000372242 FAT3Q8TDW7 4589 aa9.74□□□□□ -0.85
TMEM53-203ENST00000372242 SLC25A20O43772 301 aa9.73□□□□□ -0.85
TMEM53-203ENST00000372242 SPRR4Q96PI1 79 aa9.73□□□□□ -0.85
TMEM53-203ENST00000372242 DHRS4-AS1Q9P1J3 65 aa9.73□□□□□ -0.85
TMEM53-203ENST00000372242 C9JAW5 83 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms