RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 ATP7BP35670 1465 aa-0.29□□□□□ -2.46
RPL39-201ENST00000361575 RGPD8O14715 1765 aaPredicted RBP-0.29□□□□□ -2.46
RPL39-201ENST00000361575 RGPD5Q99666 1765 aa-0.29□□□□□ -2.46
RPL39-201ENST00000361575 DOT1LQ8TEK3 1739 aa-0.29□□□□□ -2.46
RPL39-201ENST00000361575 ZNF831Q5JPB2 1677 aa-0.29□□□□□ -2.46
RPL39-201ENST00000361575 SRRM2Q9UQ35 2752 aaKnown RBP-0.29□□□□□ -2.46
RPL39-201ENST00000361575 NESP48681 1621 aa-0.29□□□□□ -2.46
RPL39-201ENST00000361575 PLGLAQ15195 96 aa-0.3□□□□□ -2.46
RPL39-201ENST00000361575 KRTAP6-2Q3LI66 62 aa-0.3□□□□□ -2.46
RPL39-201ENST00000361575 PKHD1P08F94 4074 aa-0.3□□□□□ -2.46
RPL39-201ENST00000361575 CNOT1A5YKK6 2376 aaKnown RBP-0.3□□□□□ -2.46
RPL39-201ENST00000361575 TGP01266 2768 aa-0.3□□□□□ -2.46
RPL39-201ENST00000361575 PLIN4Q96Q06 1357 aa-0.31□□□□□ -2.46
RPL39-201ENST00000361575 ADAMTS12P58397 1594 aa-0.31□□□□□ -2.46
RPL39-201ENST00000361575 NEXMIFQ5QGS0 1516 aa-0.31□□□□□ -2.46
RPL39-201ENST00000361575 AKAP13Q12802 2813 aa-0.31□□□□□ -2.46
RPL39-201ENST00000361575 DDX60LQ5H9U9 1706 aaKnown RBP-0.32□□□□□ -2.46
RPL39-201ENST00000361575 LRRC9Q6ZRR7 1453 aa-0.32□□□□□ -2.46
RPL39-201ENST00000361575 A0A1B0GUT8 65 aa-0.32□□□□□ -2.46
RPL39-201ENST00000361575 PVALEFA0A1B0GWK0 134 aa-0.32□□□□□ -2.46
RPL39-201ENST00000361575 KRTAP19-8Q3LI54 63 aa-0.32□□□□□ -2.46
RPL39-201ENST00000361575 COX6B2Q6YFQ2 88 aa-0.32□□□□□ -2.46
RPL39-201ENST00000361575 WFDC13Q8IUB5 93 aa-0.32□□□□□ -2.46
RPL39-201ENST00000361575 LYSTQ99698 3801 aa-0.32□□□□□ -2.46
RPL39-201ENST00000361575 Q9H521 79 aa-0.32□□□□□ -2.46
RPL39-201ENST00000361575 CDKN2A-AS1Q9UH64 79 aa-0.32□□□□□ -2.46
RPL39-201ENST00000361575 PLCH1Q4KWH8 1693 aa-0.33□□□□□ -2.46
RPL39-201ENST00000361575 PCNX1Q96RV3 2341 aa-0.33□□□□□ -2.46
RPL39-201ENST00000361575 PTPN23Q9H3S7 1636 aa-0.33□□□□□ -2.46
RPL39-201ENST00000361575 C9orf62Q8N4C0 152 aa-0.33□□□□□ -2.46
RPL39-201ENST00000361575 PRRC2CQ9Y520 2896 aaKnown RBP-0.33□□□□□ -2.46
RPL39-201ENST00000361575 CICQ96RK0 1608 aaPredicted RBP-0.34□□□□□ -2.46
RPL39-201ENST00000361575 MAP3K4Q9Y6R4 1608 aa-0.34□□□□□ -2.46
RPL39-201ENST00000361575 ARFGEF2Q9Y6D5 1785 aa-0.34□□□□□ -2.46
RPL39-201ENST00000361575 COX7BP24311 80 aa-0.34□□□□□ -2.46
RPL39-201ENST00000361575 RABAC1Q9UI14 185 aa-0.34□□□□□ -2.46
RPL39-201ENST00000361575 USP32Q8NFA0 1604 aa-0.35□□□□□ -2.46
RPL39-201ENST00000361575 KNL1Q8NG31 2342 aa-0.35□□□□□ -2.46
RPL39-201ENST00000361575 CYB5AP00167 134 aa-0.35□□□□□ -2.47
RPL39-201ENST00000361575 SNRPFP62306 86 aaKnown RBP-0.35□□□□□ -2.47
RPL39-201ENST00000361575 CFAP43Q8NDM7 1665 aa-0.35□□□□□ -2.47
RPL39-201ENST00000361575 SETD2Q9BYW2 2564 aaPredicted RBP-0.35□□□□□ -2.47
RPL39-201ENST00000361575 ANKRD36CQ5JPF3 1778 aa-0.35□□□□□ -2.47
RPL39-201ENST00000361575 NWD1Q149M9 1564 aa-0.36□□□□□ -2.47
RPL39-201ENST00000361575 K7EP34 96 aa-0.36□□□□□ -2.47
RPL39-201ENST00000361575 SPRR2AP35326 72 aa-0.36□□□□□ -2.47
RPL39-201ENST00000361575 RPL38P63173 70 aaKnown RBP-0.36□□□□□ -2.47
RPL39-201ENST00000361575 KIF14Q15058 1648 aa-0.36□□□□□ -2.47
RPL39-201ENST00000361575 SPTBN4Q9H254 2564 aa-0.36□□□□□ -2.47
RPL39-201ENST00000361575 NBASA2RRP1 2371 aa-0.37□□□□□ -2.47
RPL39-201ENST00000361575 PIK3C2BO00750 1634 aa-0.37□□□□□ -2.47
RPL39-201ENST00000361575 RICTORQ6R327 1708 aa-0.37□□□□□ -2.47
RPL39-201ENST00000361575 IQCF6A8MYZ5 107 aa-0.37□□□□□ -2.47
RPL39-201ENST00000361575 H0YGG7 62 aa-0.37□□□□□ -2.47
RPL39-201ENST00000361575 LAMA5O15230 3695 aa-0.37□□□□□ -2.47
RPL39-201ENST00000361575 CUBNO60494 3623 aa-0.38□□□□□ -2.47
RPL39-201ENST00000361575 MYMXA0A1B0GTQ4 84 aa-0.38□□□□□ -2.47
RPL39-201ENST00000361575 SPRR2EP22531 72 aa-0.38□□□□□ -2.47
RPL39-201ENST00000361575 S100A16Q96FQ6 103 aaKnown RBP-0.38□□□□□ -2.47
RPL39-201ENST00000361575 PKD1P98161 4303 aa-0.39□□□□□ -2.47
RPL39-201ENST00000361575 NDUFA3O95167 84 aa-0.39□□□□□ -2.47
RPL39-201ENST00000361575 LINC00643Q86TS7 51 aa-0.39□□□□□ -2.47
RPL39-201ENST00000361575 GAFA1Q96PS6 74 aa-0.39□□□□□ -2.47
RPL39-201ENST00000361575 KMT2CQ8NEZ4 4911 aaKnown RBP-0.39□□□□□ -2.47
RPL39-201ENST00000361575 ITSN1Q15811 1721 aa-0.39□□□□□ -2.47
RPL39-201ENST00000361575 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.4□□□□□ -2.47
RPL39-201ENST00000361575 TJP1Q07157 1748 aa-0.4□□□□□ -2.47
RPL39-201ENST00000361575 ACYP1P07311 99 aa-0.4□□□□□ -2.47
RPL39-201ENST00000361575 KRTAP20-2Q3LI61 65 aa-0.4□□□□□ -2.47
RPL39-201ENST00000361575 WFDC9Q8NEX5 89 aa-0.4□□□□□ -2.47
RPL39-201ENST00000361575 VPS13BQ7Z7G8 4022 aa-0.4□□□□□ -2.47
RPL39-201ENST00000361575 ZZEF1O43149 2961 aa-0.4□□□□□ -2.47
RPL39-201ENST00000361575 PLXNC1O60486 1568 aa-0.4□□□□□ -2.47
RPL39-201ENST00000361575 NF1P21359 2839 aa-0.41□□□□□ -2.47
RPL39-201ENST00000361575 HTTP42858 3142 aa-0.41□□□□□ -2.47
RPL39-201ENST00000361575 AKAP9Q99996 3911 aa-0.41□□□□□ -2.47
RPL39-201ENST00000361575 NBPF19A0A087WUL8 3843 aa-0.41□□□□□ -2.48
RPL39-201ENST00000361575 TNRC18O15417 2968 aaPredicted RBP-0.42□□□□□ -2.48
RPL39-201ENST00000361575 PKHD1L1Q86WI1 4243 aa-0.42□□□□□ -2.48
RPL39-201ENST00000361575 TRAV21A0A0B4J279 112 aa-0.42□□□□□ -2.48
RPL39-201ENST00000361575 H3BNG1 76 aa-0.42□□□□□ -2.48
RPL39-201ENST00000361575 NDUFB1O75438 58 aa-0.42□□□□□ -2.48
RPL39-201ENST00000361575 DEFA5Q01523 94 aa-0.42□□□□□ -2.48
RPL39-201ENST00000361575 DNAH9Q9NYC9 4486 aa-0.42□□□□□ -2.48
RPL39-201ENST00000361575 CREBBPQ92793 2442 aa-0.43□□□□□ -2.48
RPL39-201ENST00000361575 DNAH6Q9C0G6 4158 aa-0.43□□□□□ -2.48
RPL39-201ENST00000361575 PDE4DIPQ5VU43 2346 aa-0.43□□□□□ -2.48
RPL39-201ENST00000361575 TDRG1Q3Y452 100 aa-0.43□□□□□ -2.48
RPL39-201ENST00000361575 FAT3Q8TDW7 4589 aa-0.43□□□□□ -2.48
RPL39-201ENST00000361575 HERC1Q15751 4861 aa-0.43□□□□□ -2.48
RPL39-201ENST00000361575 PARP4Q9UKK3 1724 aaKnown RBP-0.44□□□□□ -2.48
RPL39-201ENST00000361575 UACAQ9BZF9 1416 aa-0.44□□□□□ -2.48
RPL39-201ENST00000361575 NEBP20929 6669 aa-0.44□□□□□ -2.48
RPL39-201ENST00000361575 CEBPZOSA8MTT3 80 aa-0.44□□□□□ -2.48
RPL39-201ENST00000361575 NCOA2Q15596 1464 aa-0.44□□□□□ -2.48
RPL39-201ENST00000361575 PCLOQ9Y6V0 5065 aa-0.44□□□□□ -2.48
RPL39-201ENST00000361575 URB2Q14146 1524 aaKnown RBP-0.44□□□□□ -2.48
RPL39-201ENST00000361575 MAGI3Q5TCQ9 1506 aa-0.44□□□□□ -2.48
RPL39-201ENST00000361575 RB1CC1Q8TDY2 1594 aa-0.45□□□□□ -2.48
RPL39-201ENST00000361575 DIP2BQ9P265 1576 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms