RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 PRO1854Q9UHT4 67 aa4.14□□□□□ -1.75
CCDC196-201ENST00000359454 UBR4Q5T4S7 5183 aa4.13□□□□□ -1.75
CCDC196-201ENST00000359454 TRBV27A0A0K0K1C4 114 aa4.13□□□□□ -1.75
CCDC196-201ENST00000359454 LOC389332A0A1B0GUA5 103 aa4.13□□□□□ -1.75
CCDC196-201ENST00000359454 VCYO14598 125 aa4.13□□□□□ -1.75
CCDC196-201ENST00000359454 GNRH2O43555 120 aa4.13□□□□□ -1.75
CCDC196-201ENST00000359454 TIMM17BO60830 172 aa4.13□□□□□ -1.75
CCDC196-201ENST00000359454 RNASE3P12724 160 aaKnown RBP4.13□□□□□ -1.75
CCDC196-201ENST00000359454 ZNF22P17026 224 aaPredicted RBP4.13□□□□□ -1.75
CCDC196-201ENST00000359454 SS18Q15532 418 aa4.13□□□□□ -1.75
CCDC196-201ENST00000359454 CIRBP-AS1Q8TBR5 109 aa4.13□□□□□ -1.75
CCDC196-201ENST00000359454 RMI2Q96E14 147 aa4.13□□□□□ -1.75
CCDC196-201ENST00000359454 TTTY13Q9BZ97 58 aa4.13□□□□□ -1.75
CCDC196-201ENST00000359454 DNAH8Q96JB1 4490 aa4.12□□□□□ -1.75
CCDC196-201ENST00000359454 TRAV12-1A0A0B4J245 112 aa4.12□□□□□ -1.75
CCDC196-201ENST00000359454 TRBV6-5A0A0K0K1A5 114 aa4.12□□□□□ -1.75
CCDC196-201ENST00000359454 NDUFC1O43677 76 aa4.12□□□□□ -1.75
CCDC196-201ENST00000359454 PRSS1P07477 247 aa4.12□□□□□ -1.75
CCDC196-201ENST00000359454 RPL37AP61513 92 aaKnown RBP4.12□□□□□ -1.75
CCDC196-201ENST00000359454 ZNF876PQ49A33 203 aa4.12□□□□□ -1.75
CCDC196-201ENST00000359454 Q6JHZ5 121 aa4.12□□□□□ -1.75
CCDC196-201ENST00000359454 SCGB1D4Q6XE38 83 aa4.12□□□□□ -1.75
CCDC196-201ENST00000359454 SMCR5Q8TEV8 140 aa4.12□□□□□ -1.75
CCDC196-201ENST00000359454 SMIM2Q9BVW6 85 aa4.12□□□□□ -1.75
CCDC196-201ENST00000359454 HMCN2Q8NDA2 5059 aa4.12□□□□□ -1.75
CCDC196-201ENST00000359454 IGHV3-73A0A0B4J1V6 119 aa4.11□□□□□ -1.75
CCDC196-201ENST00000359454 TRBV30A0A0K0K1B3 111 aa4.11□□□□□ -1.75
CCDC196-201ENST00000359454 H7BZZ5 65 aa4.11□□□□□ -1.75
CCDC196-201ENST00000359454 IGKV2-30P06310 120 aa4.11□□□□□ -1.75
CCDC196-201ENST00000359454 CFC1BP0CG36 223 aa4.11□□□□□ -1.75
CCDC196-201ENST00000359454 CFC1P0CG37 223 aa4.11□□□□□ -1.75
CCDC196-201ENST00000359454 PLNP26678 52 aa4.11□□□□□ -1.75
CCDC196-201ENST00000359454 XCL1P47992 114 aa4.11□□□□□ -1.75
CCDC196-201ENST00000359454 C14orf178Q8N769 122 aaPredicted RBP4.11□□□□□ -1.75
CCDC196-201ENST00000359454 TOMM6Q96B49 74 aa4.11□□□□□ -1.75
CCDC196-201ENST00000359454 TMEM141Q96I45 108 aa4.11□□□□□ -1.75
CCDC196-201ENST00000359454 IGKV2D-24A0A075B6R9 120 aa4.1□□□□□ -1.75
CCDC196-201ENST00000359454 H7C423 109 aa4.1□□□□□ -1.75
CCDC196-201ENST00000359454 M0R378 163 aa4.1□□□□□ -1.75
CCDC196-201ENST00000359454 MGPP08493 103 aa4.1□□□□□ -1.75
CCDC196-201ENST00000359454 C14orf177Q52M58 125 aa4.1□□□□□ -1.75
CCDC196-201ENST00000359454 LINC00474Q9P2X8 69 aa4.1□□□□□ -1.75
CCDC196-201ENST00000359454 KIF25-AS1Q9Y6Z4 181 aa4.1□□□□□ -1.75
CCDC196-201ENST00000359454 MT1HL1P0DM35 61 aa4.09□□□□□ -1.75
CCDC196-201ENST00000359454 POLR2KP53803 58 aaKnown RBP4.09□□□□□ -1.75
CCDC196-201ENST00000359454 KLKP1Q107X0 134 aa4.09□□□□□ -1.75
CCDC196-201ENST00000359454 SFTA2Q6UW10 78 aa4.09□□□□□ -1.75
CCDC196-201ENST00000359454 SCGB3A1Q96QR1 104 aa4.09□□□□□ -1.75
CCDC196-201ENST00000359454 F8VRH5 84 aa4.08□□□□□ -1.76
CCDC196-201ENST00000359454 I3L3M4 83 aa4.08□□□□□ -1.76
CCDC196-201ENST00000359454 UBE2L6O14933 153 aa4.08□□□□□ -1.76
CCDC196-201ENST00000359454 ZNF73O43830 326 aaPredicted RBP4.08□□□□□ -1.76
CCDC196-201ENST00000359454 RBM3P98179 157 aaKnown RBP4.08□□□□□ -1.76
CCDC196-201ENST00000359454 C2orf66Q6UXQ4 117 aa4.08□□□□□ -1.76
CCDC196-201ENST00000359454 Q6ZVQ6 151 aa4.08□□□□□ -1.76
CCDC196-201ENST00000359454 PHF5AQ7RTV0 110 aaKnown RBP4.08□□□□□ -1.76
CCDC196-201ENST00000359454 TIMM17AQ99595 171 aa4.08□□□□□ -1.76
CCDC196-201ENST00000359454 CHCHD7Q9BUK0 85 aa4.08□□□□□ -1.76
CCDC196-201ENST00000359454 KLK12Q9UKR0 248 aa4.08□□□□□ -1.76
CCDC196-201ENST00000359454 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.07□□□□□ -1.76
CCDC196-201ENST00000359454 SDHAF1A6NFY7 115 aa4.07□□□□□ -1.76
CCDC196-201ENST00000359454 M0QY20 66 aa4.07□□□□□ -1.76
CCDC196-201ENST00000359454 TIMM21Q9BVV7 248 aa4.07□□□□□ -1.76
CCDC196-201ENST00000359454 MRPL35Q9NZE8 188 aaKnown RBP4.07□□□□□ -1.76
CCDC196-201ENST00000359454 LRP1Q07954 4544 aaKnown RBP4.07□□□□□ -1.76
CCDC196-201ENST00000359454 PKHD1L1Q86WI1 4243 aa4.07□□□□□ -1.76
CCDC196-201ENST00000359454 TRAV13-2A0A0B4J235 113 aa4.06□□□□□ -1.76
CCDC196-201ENST00000359454 TRBV10-1A0A0K0K1A3 114 aa4.06□□□□□ -1.76
CCDC196-201ENST00000359454 TMEM223A0PJW6 202 aa4.06□□□□□ -1.76
CCDC196-201ENST00000359454 LST1O00453 97 aa4.06□□□□□ -1.76
CCDC196-201ENST00000359454 LCA10Q71F78 164 aa4.06□□□□□ -1.76
CCDC196-201ENST00000359454 UBE2D4Q9Y2X8 147 aa4.06□□□□□ -1.76
CCDC196-201ENST00000359454 FAT3Q8TDW7 4589 aa4.05□□□□□ -1.76
CCDC196-201ENST00000359454 TRAV7A0A075B6U4 112 aa4.05□□□□□ -1.76
CCDC196-201ENST00000359454 TMEM256-PLSCR3K7ERE1 68 aa4.05□□□□□ -1.76
CCDC196-201ENST00000359454 COX6CP09669 75 aa4.05□□□□□ -1.76
CCDC196-201ENST00000359454 UBE2BP63146 152 aa4.05□□□□□ -1.76
CCDC196-201ENST00000359454 CIRBPQ14011 172 aaKnown RBP4.05□□□□□ -1.76
CCDC196-201ENST00000359454 Q1T7F1 81 aa4.05□□□□□ -1.76
CCDC196-201ENST00000359454 FAM74A4Q5TZK3 123 aa4.05□□□□□ -1.76
CCDC196-201ENST00000359454 ATP5EP2Q5VTU8 51 aa4.05□□□□□ -1.76
CCDC196-201ENST00000359454 C20orf197Q8N268 126 aa4.05□□□□□ -1.76
CCDC196-201ENST00000359454 C9orf163Q8N9P6 203 aa4.05□□□□□ -1.76
CCDC196-201ENST00000359454 RPL39LQ96EH5 51 aaKnown RBP4.05□□□□□ -1.76
CCDC196-201ENST00000359454 IGIPA6NJ69 53 aa4.04□□□□□ -1.76
CCDC196-201ENST00000359454 ZNF815PA8K554 130 aa4.04□□□□□ -1.76
CCDC196-201ENST00000359454 GAS8-AS1O95177 125 aa4.04□□□□□ -1.76
CCDC196-201ENST00000359454 CRPP02741 224 aa4.04□□□□□ -1.76
CCDC196-201ENST00000359454 RPL36AP83881 106 aaKnown RBP4.04□□□□□ -1.76
CCDC196-201ENST00000359454 ENHOQ6UWT2 76 aa4.04□□□□□ -1.76
CCDC196-201ENST00000359454 C20orf203Q8NBC4 194 aa4.04□□□□□ -1.76
CCDC196-201ENST00000359454 C11orf86A6NJI1 115 aa4.03□□□□□ -1.76
CCDC196-201ENST00000359454 MIAQ16674 131 aa4.03□□□□□ -1.76
CCDC196-201ENST00000359454 Q8N9P0 234 aaPredicted RBP4.03□□□□□ -1.76
CCDC196-201ENST00000359454 TRBV10-3A0A0K0K1G6 114 aa4.02□□□□□ -1.77
CCDC196-201ENST00000359454 A8MUN3 132 aa4.02□□□□□ -1.77
CCDC196-201ENST00000359454 PANO1I0J062 215 aa4.02□□□□□ -1.77
CCDC196-201ENST00000359454 ANGP03950 147 aaKnown RBP4.02□□□□□ -1.77
CCDC196-201ENST00000359454 PRSS2P07478 247 aa4.02□□□□□ -1.77
CCDC196-201ENST00000359454 OPRPNQ99935 248 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms