RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 C16orf90A8MZG2 172 aa5.99□□□□□ -1.45
COL6A6-201ENST00000358511 LINC01600Q96MT4 127 aa5.99□□□□□ -1.45
COL6A6-201ENST00000358511 ITPR3Q14573 2671 aa5.99□□□□□ -1.45
COL6A6-201ENST00000358511 A8MWP4 228 aa5.99□□□□□ -1.45
COL6A6-201ENST00000358511 LINC00167Q96N53 147 aa5.98□□□□□ -1.45
COL6A6-201ENST00000358511 GVQW2A0A096LPI5 108 aaPredicted RBP5.98□□□□□ -1.45
COL6A6-201ENST00000358511 UQCR11O14957 56 aa5.98□□□□□ -1.45
COL6A6-201ENST00000358511 LCA10Q71F78 164 aa5.97□□□□□ -1.45
COL6A6-201ENST00000358511 TYMSOSQ8TAI1 123 aa5.97□□□□□ -1.45
COL6A6-201ENST00000358511 CFAP46Q8IYW2 2715 aa5.97□□□□□ -1.45
COL6A6-201ENST00000358511 UNC79Q9P2D8 2635 aa5.97□□□□□ -1.45
COL6A6-201ENST00000358511 PLA2G2DQ9UNK4 145 aa5.96□□□□□ -1.45
COL6A6-201ENST00000358511 TRANK1O15050 2925 aa5.96□□□□□ -1.46
COL6A6-201ENST00000358511 M0R2T5 61 aa5.96□□□□□ -1.46
COL6A6-201ENST00000358511 Q96NJ1 140 aa5.96□□□□□ -1.46
COL6A6-201ENST00000358511 C16orf95Q9H693 158 aa5.95□□□□□ -1.46
COL6A6-201ENST00000358511 Q1T7F1 81 aa5.95□□□□□ -1.46
COL6A6-201ENST00000358511 C8orf17Q9NRJ1 99 aa5.95□□□□□ -1.46
COL6A6-201ENST00000358511 SPANXA2-OT1Q8N9U9 137 aa5.94□□□□□ -1.46
COL6A6-201ENST00000358511 EIF4EBP3O60516 100 aaPredicted RBP5.94□□□□□ -1.46
COL6A6-201ENST00000358511 LINC00313P59037 77 aa5.94□□□□□ -1.46
COL6A6-201ENST00000358511 LINC00483Q53H64 154 aa5.94□□□□□ -1.46
COL6A6-201ENST00000358511 PSORS1C2Q9UIG4 136 aa5.94□□□□□ -1.46
COL6A6-201ENST00000358511 RPL37AP61513 92 aaKnown RBP5.93□□□□□ -1.46
COL6A6-201ENST00000358511 KLK9Q2XQG4 91 aa5.93□□□□□ -1.46
COL6A6-201ENST00000358511 H3BS24 57 aa5.93□□□□□ -1.46
COL6A6-201ENST00000358511 DSPP15924 2871 aaKnown RBP5.92□□□□□ -1.46
COL6A6-201ENST00000358511 HELZ2Q9BYK8 2649 aaKnown RBP5.92□□□□□ -1.46
COL6A6-201ENST00000358511 MIR22HGQ0VDD5 57 aa5.92□□□□□ -1.46
COL6A6-201ENST00000358511 CDC42SE1Q9NRR8 79 aa5.92□□□□□ -1.46
COL6A6-201ENST00000358511 A0A1W2PPR1 153 aa5.92□□□□□ -1.46
COL6A6-201ENST00000358511 H3BNG1 76 aa5.92□□□□□ -1.46
COL6A6-201ENST00000358511 OBSCN-AS1Q96MR7 158 aa5.92□□□□□ -1.46
COL6A6-201ENST00000358511 EPM2AB3EWF7 344 aa5.91□□□□□ -1.46
COL6A6-201ENST00000358511 LINC00528Q8N1L1 170 aa5.9□□□□□ -1.46
COL6A6-201ENST00000358511 ST20-AS1Q8NBB2 130 aa5.9□□□□□ -1.46
COL6A6-201ENST00000358511 A0A0D9SG42 100 aa5.9□□□□□ -1.46
COL6A6-201ENST00000358511 COL6A5A8TX70 2615 aa5.9□□□□□ -1.46
COL6A6-201ENST00000358511 KCNQ1DNQ9H478 68 aa5.9□□□□□ -1.47
COL6A6-201ENST00000358511 FLNBO75369 2602 aaKnown RBP5.89□□□□□ -1.47
COL6A6-201ENST00000358511 CHTF8P0CG12 524 aa5.89□□□□□ -1.47
COL6A6-201ENST00000358511 Q6ZRP5 223 aa5.89□□□□□ -1.47
COL6A6-201ENST00000358511 ZNF575Q86XF7 245 aa5.89□□□□□ -1.47
COL6A6-201ENST00000358511 TEX15Q9BXT5 2789 aa5.87□□□□□ -1.47
COL6A6-201ENST00000358511 VPS13AQ96RL7 3174 aa5.87□□□□□ -1.47
COL6A6-201ENST00000358511 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
COL6A6-201ENST00000358511 Q5XG85 94 aa5.86□□□□□ -1.47
COL6A6-201ENST00000358511 MRPL34Q9BQ48 92 aaKnown RBP5.86□□□□□ -1.47
COL6A6-201ENST00000358511 RBM12B-AS1Q9P1G2 102 aa5.86□□□□□ -1.47
COL6A6-201ENST00000358511 CHD7Q9P2D1 2997 aa5.86□□□□□ -1.47
COL6A6-201ENST00000358511 SMR3AQ99954 134 aa5.86□□□□□ -1.47
COL6A6-201ENST00000358511 KMT2BQ9UMN6 2715 aaPredicted RBP5.86□□□□□ -1.47
COL6A6-201ENST00000358511 IGLV5-37A0A075B6J1 123 aa5.86□□□□□ -1.47
COL6A6-201ENST00000358511 C9orf92A6NGG3 77 aa5.85□□□□□ -1.47
COL6A6-201ENST00000358511 OCR1Q9BZK8 76 aa5.85□□□□□ -1.47
COL6A6-201ENST00000358511 IGFL1Q6UW32 110 aa5.84□□□□□ -1.47
COL6A6-201ENST00000358511 ITPR1Q14643 2758 aa5.84□□□□□ -1.47
COL6A6-201ENST00000358511 FAM168BA1KXE4 195 aa5.83□□□□□ -1.48
COL6A6-201ENST00000358511 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
COL6A6-201ENST00000358511 Q8N377 158 aa5.83□□□□□ -1.48
COL6A6-201ENST00000358511 FRYQ5TBA9 3013 aa5.82□□□□□ -1.48
COL6A6-201ENST00000358511 Q75L30 129 aa5.82□□□□□ -1.48
COL6A6-201ENST00000358511 IGLV1-50A0A075B6I6 118 aa5.81□□□□□ -1.48
COL6A6-201ENST00000358511 PHF5AQ7RTV0 110 aaKnown RBP5.81□□□□□ -1.48
COL6A6-201ENST00000358511 APCP25054 2843 aa5.81□□□□□ -1.48
COL6A6-201ENST00000358511 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
COL6A6-201ENST00000358511 IGLV5-48A0A075B6I7 105 aa5.8□□□□□ -1.48
COL6A6-201ENST00000358511 DNAH10OSP0CZ25 163 aa5.8□□□□□ -1.48
COL6A6-201ENST00000358511 Q8NAQ8 132 aa5.8□□□□□ -1.48
COL6A6-201ENST00000358511 PRO3102Q9H379 93 aa5.8□□□□□ -1.48
COL6A6-201ENST00000358511 NBEAL2Q6ZNJ1 2754 aa5.79□□□□□ -1.48
COL6A6-201ENST00000358511 A0A0A0MQY5 61 aa5.79□□□□□ -1.48
COL6A6-201ENST00000358511 STAB2Q8WWQ8 2551 aa5.79□□□□□ -1.48
COL6A6-201ENST00000358511 STAB1Q9NY15 2570 aa5.79□□□□□ -1.48
COL6A6-201ENST00000358511 PRR34Q9NV39 138 aa5.78□□□□□ -1.48
COL6A6-201ENST00000358511 MGAQ8IWI9 3026 aa5.78□□□□□ -1.48
COL6A6-201ENST00000358511 NBEAQ8NFP9 2946 aa5.78□□□□□ -1.48
COL6A6-201ENST00000358511 FP248Q71RG6 208 aaPredicted RBP5.78□□□□□ -1.48
COL6A6-201ENST00000358511 MKI67P46013 3256 aaKnown RBP5.77□□□□□ -1.49
COL6A6-201ENST00000358511 KRTAP10-9P60411 292 aa5.77□□□□□ -1.49
COL6A6-201ENST00000358511 TLX1NBP0CAT3 122 aa5.77□□□□□ -1.49
COL6A6-201ENST00000358511 DMBT1Q9UGM3 2413 aaPredicted RBP5.77□□□□□ -1.49
COL6A6-201ENST00000358511 RTL8CO15255 209 aa5.77□□□□□ -1.49
COL6A6-201ENST00000358511 FAM229BQ4G0N7 80 aa5.76□□□□□ -1.49
COL6A6-201ENST00000358511 XIRP2A4UGR9 3374 aa5.75□□□□□ -1.49
COL6A6-201ENST00000358511 C15orf56Q8N910 161 aa5.75□□□□□ -1.49
COL6A6-201ENST00000358511 CYSTM1Q9H1C7 97 aa5.75□□□□□ -1.49
COL6A6-201ENST00000358511 ZNF292O60281 2723 aa5.74□□□□□ -1.49
COL6A6-201ENST00000358511 TRIOO75962 3097 aa5.74□□□□□ -1.49
COL6A6-201ENST00000358511 LINC00588Q9Y4M8 146 aa5.74□□□□□ -1.49
COL6A6-201ENST00000358511 BAHCC1Q9P281 2608 aa5.73□□□□□ -1.49
COL6A6-201ENST00000358511 SETXQ7Z333 2677 aaKnown RBP5.73□□□□□ -1.49
COL6A6-201ENST00000358511 KALRNO60229 2985 aa5.73□□□□□ -1.49
COL6A6-201ENST00000358511 UTP20O75691 2785 aaKnown RBP5.73□□□□□ -1.49
COL6A6-201ENST00000358511 RANBP2P49792 3224 aaKnown RBP5.72□□□□□ -1.49
COL6A6-201ENST00000358511 FREM2Q5SZK8 3169 aa5.72□□□□□ -1.49
COL6A6-201ENST00000358511 A0A1W2PNM2 257 aa5.72□□□□□ -1.49
COL6A6-201ENST00000358511 TACC2O95359 2948 aa5.71□□□□□ -1.5
COL6A6-201ENST00000358511 LINC00304Q8N9R0 145 aa5.71□□□□□ -1.5
COL6A6-201ENST00000358511 SPRR4Q96PI1 79 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms