RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 C16orf90A8MZG2 172 aa5.99□□□□□ -1.45
COL6A6-201ENST00000358511 LINC01600Q96MT4 127 aa5.99□□□□□ -1.45
COL6A6-201ENST00000358511 ITPR3Q14573 2671 aa5.99□□□□□ -1.45
COL6A6-201ENST00000358511 A8MWP4 228 aa5.99□□□□□ -1.45
COL6A6-201ENST00000358511 LINC00167Q96N53 147 aa5.98□□□□□ -1.45
COL6A6-201ENST00000358511 GVQW2A0A096LPI5 108 aaPredicted RBP5.98□□□□□ -1.45
COL6A6-201ENST00000358511 UQCR11O14957 56 aa5.98□□□□□ -1.45
COL6A6-201ENST00000358511 LCA10Q71F78 164 aa5.97□□□□□ -1.45
COL6A6-201ENST00000358511 TYMSOSQ8TAI1 123 aa5.97□□□□□ -1.45
COL6A6-201ENST00000358511 CFAP46Q8IYW2 2715 aa5.97□□□□□ -1.45
COL6A6-201ENST00000358511 UNC79Q9P2D8 2635 aa5.97□□□□□ -1.45
COL6A6-201ENST00000358511 PLA2G2DQ9UNK4 145 aa5.96□□□□□ -1.45
COL6A6-201ENST00000358511 TRANK1O15050 2925 aa5.96□□□□□ -1.46
COL6A6-201ENST00000358511 M0R2T5 61 aa5.96□□□□□ -1.46
COL6A6-201ENST00000358511 Q96NJ1 140 aa5.96□□□□□ -1.46
COL6A6-201ENST00000358511 C16orf95Q9H693 158 aa5.95□□□□□ -1.46
COL6A6-201ENST00000358511 Q1T7F1 81 aa5.95□□□□□ -1.46
COL6A6-201ENST00000358511 C8orf17Q9NRJ1 99 aa5.95□□□□□ -1.46
COL6A6-201ENST00000358511 SPANXA2-OT1Q8N9U9 137 aa5.94□□□□□ -1.46
COL6A6-201ENST00000358511 EIF4EBP3O60516 100 aaPredicted RBP5.94□□□□□ -1.46
COL6A6-201ENST00000358511 LINC00313P59037 77 aa5.94□□□□□ -1.46
COL6A6-201ENST00000358511 LINC00483Q53H64 154 aa5.94□□□□□ -1.46
COL6A6-201ENST00000358511 PSORS1C2Q9UIG4 136 aa5.94□□□□□ -1.46
COL6A6-201ENST00000358511 RPL37AP61513 92 aaKnown RBP5.93□□□□□ -1.46
COL6A6-201ENST00000358511 KLK9Q2XQG4 91 aa5.93□□□□□ -1.46
COL6A6-201ENST00000358511 H3BS24 57 aa5.93□□□□□ -1.46
COL6A6-201ENST00000358511 DSPP15924 2871 aaKnown RBP5.92□□□□□ -1.46
COL6A6-201ENST00000358511 HELZ2Q9BYK8 2649 aaKnown RBP5.92□□□□□ -1.46
COL6A6-201ENST00000358511 MIR22HGQ0VDD5 57 aa5.92□□□□□ -1.46
COL6A6-201ENST00000358511 CDC42SE1Q9NRR8 79 aa5.92□□□□□ -1.46
COL6A6-201ENST00000358511 A0A1W2PPR1 153 aa5.92□□□□□ -1.46
COL6A6-201ENST00000358511 H3BNG1 76 aa5.92□□□□□ -1.46
COL6A6-201ENST00000358511 OBSCN-AS1Q96MR7 158 aa5.92□□□□□ -1.46
COL6A6-201ENST00000358511 EPM2AB3EWF7 344 aa5.91□□□□□ -1.46
COL6A6-201ENST00000358511 LINC00528Q8N1L1 170 aa5.9□□□□□ -1.46
COL6A6-201ENST00000358511 ST20-AS1Q8NBB2 130 aa5.9□□□□□ -1.46
COL6A6-201ENST00000358511 A0A0D9SG42 100 aa5.9□□□□□ -1.46
COL6A6-201ENST00000358511 COL6A5A8TX70 2615 aa5.9□□□□□ -1.46
COL6A6-201ENST00000358511 KCNQ1DNQ9H478 68 aa5.9□□□□□ -1.47
COL6A6-201ENST00000358511 FLNBO75369 2602 aaKnown RBP5.89□□□□□ -1.47
COL6A6-201ENST00000358511 CHTF8P0CG12 524 aa5.89□□□□□ -1.47
COL6A6-201ENST00000358511 Q6ZRP5 223 aa5.89□□□□□ -1.47
COL6A6-201ENST00000358511 ZNF575Q86XF7 245 aa5.89□□□□□ -1.47
COL6A6-201ENST00000358511 TEX15Q9BXT5 2789 aa5.87□□□□□ -1.47
COL6A6-201ENST00000358511 VPS13AQ96RL7 3174 aa5.87□□□□□ -1.47
COL6A6-201ENST00000358511 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
COL6A6-201ENST00000358511 Q5XG85 94 aa5.86□□□□□ -1.47
COL6A6-201ENST00000358511 MRPL34Q9BQ48 92 aaKnown RBP5.86□□□□□ -1.47
COL6A6-201ENST00000358511 RBM12B-AS1Q9P1G2 102 aa5.86□□□□□ -1.47
COL6A6-201ENST00000358511 CHD7Q9P2D1 2997 aa5.86□□□□□ -1.47
COL6A6-201ENST00000358511 SMR3AQ99954 134 aa5.86□□□□□ -1.47
COL6A6-201ENST00000358511 KMT2BQ9UMN6 2715 aaPredicted RBP5.86□□□□□ -1.47
COL6A6-201ENST00000358511 IGLV5-37A0A075B6J1 123 aa5.86□□□□□ -1.47
COL6A6-201ENST00000358511 C9orf92A6NGG3 77 aa5.85□□□□□ -1.47
COL6A6-201ENST00000358511 OCR1Q9BZK8 76 aa5.85□□□□□ -1.47
COL6A6-201ENST00000358511 IGFL1Q6UW32 110 aa5.84□□□□□ -1.47
COL6A6-201ENST00000358511 ITPR1Q14643 2758 aa5.84□□□□□ -1.47
COL6A6-201ENST00000358511 FAM168BA1KXE4 195 aa5.83□□□□□ -1.48
COL6A6-201ENST00000358511 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
COL6A6-201ENST00000358511 Q8N377 158 aa5.83□□□□□ -1.48
COL6A6-201ENST00000358511 FRYQ5TBA9 3013 aa5.82□□□□□ -1.48
COL6A6-201ENST00000358511 Q75L30 129 aa5.82□□□□□ -1.48
COL6A6-201ENST00000358511 IGLV1-50A0A075B6I6 118 aa5.81□□□□□ -1.48
COL6A6-201ENST00000358511 PHF5AQ7RTV0 110 aaKnown RBP5.81□□□□□ -1.48
COL6A6-201ENST00000358511 APCP25054 2843 aa5.81□□□□□ -1.48
COL6A6-201ENST00000358511 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
COL6A6-201ENST00000358511 IGLV5-48A0A075B6I7 105 aa5.8□□□□□ -1.48
COL6A6-201ENST00000358511 DNAH10OSP0CZ25 163 aa5.8□□□□□ -1.48
COL6A6-201ENST00000358511 Q8NAQ8 132 aa5.8□□□□□ -1.48
COL6A6-201ENST00000358511 PRO3102Q9H379 93 aa5.8□□□□□ -1.48
COL6A6-201ENST00000358511 NBEAL2Q6ZNJ1 2754 aa5.79□□□□□ -1.48
COL6A6-201ENST00000358511 A0A0A0MQY5 61 aa5.79□□□□□ -1.48
COL6A6-201ENST00000358511 STAB2Q8WWQ8 2551 aa5.79□□□□□ -1.48
COL6A6-201ENST00000358511 STAB1Q9NY15 2570 aa5.79□□□□□ -1.48
COL6A6-201ENST00000358511 PRR34Q9NV39 138 aa5.78□□□□□ -1.48
COL6A6-201ENST00000358511 MGAQ8IWI9 3026 aa5.78□□□□□ -1.48
COL6A6-201ENST00000358511 NBEAQ8NFP9 2946 aa5.78□□□□□ -1.48
COL6A6-201ENST00000358511 FP248Q71RG6 208 aaPredicted RBP5.78□□□□□ -1.48
COL6A6-201ENST00000358511 MKI67P46013 3256 aaKnown RBP5.77□□□□□ -1.49
COL6A6-201ENST00000358511 KRTAP10-9P60411 292 aa5.77□□□□□ -1.49
COL6A6-201ENST00000358511 TLX1NBP0CAT3 122 aa5.77□□□□□ -1.49
COL6A6-201ENST00000358511 DMBT1Q9UGM3 2413 aaPredicted RBP5.77□□□□□ -1.49
COL6A6-201ENST00000358511 RTL8CO15255 209 aa5.77□□□□□ -1.49
COL6A6-201ENST00000358511 FAM229BQ4G0N7 80 aa5.76□□□□□ -1.49
COL6A6-201ENST00000358511 XIRP2A4UGR9 3374 aa5.75□□□□□ -1.49
COL6A6-201ENST00000358511 C15orf56Q8N910 161 aa5.75□□□□□ -1.49
COL6A6-201ENST00000358511 CYSTM1Q9H1C7 97 aa5.75□□□□□ -1.49
COL6A6-201ENST00000358511 ZNF292O60281 2723 aa5.74□□□□□ -1.49
COL6A6-201ENST00000358511 TRIOO75962 3097 aa5.74□□□□□ -1.49
COL6A6-201ENST00000358511 LINC00588Q9Y4M8 146 aa5.74□□□□□ -1.49
COL6A6-201ENST00000358511 BAHCC1Q9P281 2608 aa5.73□□□□□ -1.49
COL6A6-201ENST00000358511 SETXQ7Z333 2677 aaKnown RBP5.73□□□□□ -1.49
COL6A6-201ENST00000358511 KALRNO60229 2985 aa5.73□□□□□ -1.49
COL6A6-201ENST00000358511 UTP20O75691 2785 aaKnown RBP5.73□□□□□ -1.49
COL6A6-201ENST00000358511 RANBP2P49792 3224 aaKnown RBP5.72□□□□□ -1.49
COL6A6-201ENST00000358511 FREM2Q5SZK8 3169 aa5.72□□□□□ -1.49
COL6A6-201ENST00000358511 A0A1W2PNM2 257 aa5.72□□□□□ -1.49
COL6A6-201ENST00000358511 TACC2O95359 2948 aa5.71□□□□□ -1.5
COL6A6-201ENST00000358511 LINC00304Q8N9R0 145 aa5.71□□□□□ -1.5
COL6A6-201ENST00000358511 SPRR4Q96PI1 79 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms