RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 COL4A2P08572 1712 aa7.33□□□□□ -1.24
COL11A1-202ENST00000358392 ZNF861PO60384 105 aa7.32□□□□□ -1.24
COL11A1-202ENST00000358392 CSNK1G2-AS1Q8NCQ2 148 aa7.3□□□□□ -1.24
COL11A1-202ENST00000358392 KRTAP10-11P60412 298 aa7.29□□□□□ -1.24
COL11A1-202ENST00000358392 WWC2-AS2Q96NR7 200 aa7.29□□□□□ -1.24
COL11A1-202ENST00000358392 TTC28Q96AY4 2481 aa7.28□□□□□ -1.24
COL11A1-202ENST00000358392 TLN1Q9Y490 2541 aaKnown RBP7.26□□□□□ -1.25
COL11A1-202ENST00000358392 IGF2RP11717 2491 aa7.26□□□□□ -1.25
COL11A1-202ENST00000358392 C9orf163Q8N9P6 203 aa7.25□□□□□ -1.25
COL11A1-202ENST00000358392 C10orf142B7Z368 130 aa7.25□□□□□ -1.25
COL11A1-202ENST00000358392 PSORS1C2Q9UIG4 136 aa7.24□□□□□ -1.25
COL11A1-202ENST00000358392 PRR26Q8N8Z3 221 aa7.24□□□□□ -1.25
COL11A1-202ENST00000358392 CASC10Q5T4H9 136 aa7.23□□□□□ -1.25
COL11A1-202ENST00000358392 IGLV7-43P04211 117 aa7.23□□□□□ -1.25
COL11A1-202ENST00000358392 A0A087WTM6 91 aa7.23□□□□□ -1.25
COL11A1-202ENST00000358392 Q1T7F1 81 aa7.23□□□□□ -1.25
COL11A1-202ENST00000358392 CAMK2N1Q7Z7J9 78 aa7.22□□□□□ -1.25
COL11A1-202ENST00000358392 A0A1W2PNM2 257 aa7.21□□□□□ -1.26
COL11A1-202ENST00000358392 K7EIL1 84 aa7.21□□□□□ -1.26
COL11A1-202ENST00000358392 ZFYVE26Q68DK2 2539 aa7.21□□□□□ -1.26
COL11A1-202ENST00000358392 JMJD1CQ15652 2540 aa7.21□□□□□ -1.26
COL11A1-202ENST00000358392 ABCA12Q86UK0 2595 aa7.2□□□□□ -1.26
COL11A1-202ENST00000358392 LINC00483Q53H64 154 aa7.2□□□□□ -1.26
COL11A1-202ENST00000358392 SPANXA2-OT1Q8N9U9 137 aa7.19□□□□□ -1.26
COL11A1-202ENST00000358392 SPRR4Q96PI1 79 aa7.19□□□□□ -1.26
COL11A1-202ENST00000358392 H3BS24 57 aa7.19□□□□□ -1.26
COL11A1-202ENST00000358392 CR1P17927 2039 aa7.19□□□□□ -1.26
COL11A1-202ENST00000358392 PRR34Q9NV39 138 aa7.19□□□□□ -1.26
COL11A1-202ENST00000358392 TLN2Q9Y4G6 2542 aa7.18□□□□□ -1.26
COL11A1-202ENST00000358392 PRAC1Q96KF2 57 aa7.17□□□□□ -1.26
COL11A1-202ENST00000358392 FAM229BQ4G0N7 80 aa7.16□□□□□ -1.26
COL11A1-202ENST00000358392 A0A1B0GU33 70 aa7.15□□□□□ -1.26
COL11A1-202ENST00000358392 PLA2G2DQ9UNK4 145 aa7.15□□□□□ -1.26
COL11A1-202ENST00000358392 KRTAP10-3P60369 221 aa7.15□□□□□ -1.26
COL11A1-202ENST00000358392 M0R2T5 61 aa7.15□□□□□ -1.27
COL11A1-202ENST00000358392 TLX1NBP0CAT3 122 aa7.14□□□□□ -1.27
COL11A1-202ENST00000358392 F8P00451 2351 aa7.13□□□□□ -1.27
COL11A1-202ENST00000358392 Q6ZSA8 131 aa7.13□□□□□ -1.27
COL11A1-202ENST00000358392 ACANP16112 2415 aa7.13□□□□□ -1.27
COL11A1-202ENST00000358392 ZNF462Q96JM2 2506 aa7.13□□□□□ -1.27
COL11A1-202ENST00000358392 GIG44P09565 113 aaPredicted RBP7.13□□□□□ -1.27
COL11A1-202ENST00000358392 CENPFP49454 3210 aa7.13□□□□□ -1.27
COL11A1-202ENST00000358392 NCOR2Q9Y618 2525 aa7.12□□□□□ -1.27
COL11A1-202ENST00000358392 LINC00612Q8N6U2 182 aa7.1□□□□□ -1.27
COL11A1-202ENST00000358392 HRES1P13985 223 aa7.1□□□□□ -1.27
COL11A1-202ENST00000358392 C19orf73Q9NVV2 129 aa7.1□□□□□ -1.27
COL11A1-202ENST00000358392 OCR1Q9BZK8 76 aa7.09□□□□□ -1.27
COL11A1-202ENST00000358392 CSAG1Q6PB30 78 aa7.09□□□□□ -1.27
COL11A1-202ENST00000358392 SETD2Q9BYW2 2564 aaPredicted RBP7.09□□□□□ -1.28
COL11A1-202ENST00000358392 ANKRD17O75179 2603 aaKnown RBP7.07□□□□□ -1.28
COL11A1-202ENST00000358392 Q75L30 129 aa7.07□□□□□ -1.28
COL11A1-202ENST00000358392 CNBPP62633 177 aaKnown RBP7.05□□□□□ -1.28
COL11A1-202ENST00000358392 PKD1L2Q7Z442 2459 aa7.04□□□□□ -1.28
COL11A1-202ENST00000358392 IGLV7-46A0A075B6I9 117 aa7.04□□□□□ -1.28
COL11A1-202ENST00000358392 S4R3F8 94 aa7.04□□□□□ -1.28
COL11A1-202ENST00000358392 A0A0A0MQY5 61 aa7.03□□□□□ -1.28
COL11A1-202ENST00000358392 KLK9Q2XQG4 91 aa7.02□□□□□ -1.29
COL11A1-202ENST00000358392 SPINK7P58062 85 aa7.02□□□□□ -1.29
COL11A1-202ENST00000358392 Q8N9P0 234 aaPredicted RBP7.01□□□□□ -1.29
COL11A1-202ENST00000358392 USP9XQ93008 2570 aaPredicted RBP7.01□□□□□ -1.29
COL11A1-202ENST00000358392 GOLGB1Q14789 3259 aaKnown RBP7.01□□□□□ -1.29
COL11A1-202ENST00000358392 Q5XG85 94 aa7□□□□□ -1.29
COL11A1-202ENST00000358392 TNP2Q05952 138 aa6.99□□□□□ -1.29
COL11A1-202ENST00000358392 EP400Q96L91 3159 aa6.99□□□□□ -1.29
COL11A1-202ENST00000358392 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.99□□□□□ -1.29
COL11A1-202ENST00000358392 DMAC1Q96GE9 116 aa6.98□□□□□ -1.29
COL11A1-202ENST00000358392 CYSTM1Q9H1C7 97 aa6.98□□□□□ -1.29
COL11A1-202ENST00000358392 LINC01558Q9Y6Z2 57 aa6.95□□□□□ -1.3
COL11A1-202ENST00000358392 Q5VV11 94 aa6.95□□□□□ -1.3
COL11A1-202ENST00000358392 ZCCHC13Q8WW36 166 aaKnown RBP6.94□□□□□ -1.3
COL11A1-202ENST00000358392 FP248Q71RG6 208 aaPredicted RBP6.93□□□□□ -1.3
COL11A1-202ENST00000358392 MMP24-AS1A0A0U1RRL7 71 aa6.92□□□□□ -1.3
COL11A1-202ENST00000358392 R4GN34 69 aa6.92□□□□□ -1.3
COL11A1-202ENST00000358392 A0A096LNT2 108 aa6.91□□□□□ -1.3
COL11A1-202ENST00000358392 Q5W150 140 aa6.9□□□□□ -1.3
COL11A1-202ENST00000358392 BPTFQ12830 3046 aa6.88□□□□□ -1.31
COL11A1-202ENST00000358392 ROMO1P60602 79 aa6.86□□□□□ -1.31
COL11A1-202ENST00000358392 ANKRD11Q6UB99 2663 aaPredicted RBP6.86□□□□□ -1.31
COL11A1-202ENST00000358392 CHD8Q9HCK8 2581 aa6.86□□□□□ -1.31
COL11A1-202ENST00000358392 H1FX-AS1Q4G0G2 97 aa6.85□□□□□ -1.31
COL11A1-202ENST00000358392 MTORP42345 2549 aa6.85□□□□□ -1.31
COL11A1-202ENST00000358392 Q8NDZ9 215 aa6.84□□□□□ -1.31
COL11A1-202ENST00000358392 USP9YO00507 2555 aaPredicted RBP6.84□□□□□ -1.32
COL11A1-202ENST00000358392 POLQO75417 2590 aa6.83□□□□□ -1.32
COL11A1-202ENST00000358392 SPATA8Q6RVD6 105 aa6.82□□□□□ -1.32
COL11A1-202ENST00000358392 M0QZ58 72 aa6.81□□□□□ -1.32
COL11A1-202ENST00000358392 PIEZO1Q92508 2521 aa6.8□□□□□ -1.32
COL11A1-202ENST00000358392 RPL37P61927 97 aaKnown RBP6.8□□□□□ -1.32
COL11A1-202ENST00000358392 SPTBN4Q9H254 2564 aa6.79□□□□□ -1.32
COL11A1-202ENST00000358392 OXTP01178 125 aa6.77□□□□□ -1.33
COL11A1-202ENST00000358392 KRTAP1-3Q8IUG1 177 aa6.76□□□□□ -1.33
COL11A1-202ENST00000358392 ADM2Q7Z4H4 148 aa6.76□□□□□ -1.33
COL11A1-202ENST00000358392 LINC00472Q9H8W2 130 aa6.75□□□□□ -1.33
COL11A1-202ENST00000358392 PLAC8Q9NZF1 115 aa6.74□□□□□ -1.33
COL11A1-202ENST00000358392 DNAH12Q6ZR08 3092 aa6.74□□□□□ -1.33
COL11A1-202ENST00000358392 USP24Q9UPU5 2620 aa6.71□□□□□ -1.33
COL11A1-202ENST00000358392 KRTAP26-1Q6PEX3 210 aa6.71□□□□□ -1.33
COL11A1-202ENST00000358392 KRTAP1-1Q07627 177 aa6.71□□□□□ -1.34
COL11A1-202ENST00000358392 PLAC4Q8WY50 150 aa6.71□□□□□ -1.34
COL11A1-202ENST00000358392 UTRNP46939 3433 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms