RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 LCA10Q71F78 164 aa6.31□□□□□ -1.4
SMARCAL1-202ENST00000358207 K7EQD1 137 aa6.31□□□□□ -1.4
SMARCAL1-202ENST00000358207 PRB2P02812 416 aaPredicted RBP6.31□□□□□ -1.4
SMARCAL1-202ENST00000358207 B9D2Q9BPU9 175 aa6.31□□□□□ -1.4
SMARCAL1-202ENST00000358207 IGKV4-1P06312 121 aa6.3□□□□□ -1.4
SMARCAL1-202ENST00000358207 OXLD1Q5BKU9 147 aa6.3□□□□□ -1.4
SMARCAL1-202ENST00000358207 LINC00612Q8N6U2 182 aa6.3□□□□□ -1.4
SMARCAL1-202ENST00000358207 NDUFS5O43920 106 aa6.3□□□□□ -1.4
SMARCAL1-202ENST00000358207 IGHV3-53P01767 116 aa6.3□□□□□ -1.4
SMARCAL1-202ENST00000358207 CDC42SE2Q9NRR3 84 aa6.3□□□□□ -1.4
SMARCAL1-202ENST00000358207 DEFB4AO15263 64 aa6.29□□□□□ -1.4
SMARCAL1-202ENST00000358207 PRR4Q16378 134 aa6.29□□□□□ -1.4
SMARCAL1-202ENST00000358207 C9orf66Q5T8R8 295 aa6.29□□□□□ -1.4
SMARCAL1-202ENST00000358207 HCG22E2RYF7 251 aa6.29□□□□□ -1.4
SMARCAL1-202ENST00000358207 MUC7Q8TAX7 377 aa6.29□□□□□ -1.4
SMARCAL1-202ENST00000358207 ALMS1Q8TCU4 4167 aa6.28□□□□□ -1.4
SMARCAL1-202ENST00000358207 LYRM9A8MSI8 78 aa6.28□□□□□ -1.4
SMARCAL1-202ENST00000358207 A8MTW9 85 aa6.28□□□□□ -1.4
SMARCAL1-202ENST00000358207 CHKB-CPT1BH3BT56 60 aa6.28□□□□□ -1.4
SMARCAL1-202ENST00000358207 C6orf99Q4VX62 202 aa6.27□□□□□ -1.41
SMARCAL1-202ENST00000358207 LINC00575Q6W349 94 aa6.27□□□□□ -1.41
SMARCAL1-202ENST00000358207 K7EIL1 84 aa6.27□□□□□ -1.41
SMARCAL1-202ENST00000358207 CELA1Q9UNI1 258 aa6.27□□□□□ -1.41
SMARCAL1-202ENST00000358207 IGLV1-51P01701 117 aa6.27□□□□□ -1.41
SMARCAL1-202ENST00000358207 UBE2AP49459 152 aa6.27□□□□□ -1.41
SMARCAL1-202ENST00000358207 C10orf25Q5T742 122 aa6.27□□□□□ -1.41
SMARCAL1-202ENST00000358207 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.27□□□□□ -1.41
SMARCAL1-202ENST00000358207 ATP11AUNQ6ZP68 121 aa6.27□□□□□ -1.41
SMARCAL1-202ENST00000358207 FAM30AQ9NZY2 134 aa6.27□□□□□ -1.41
SMARCAL1-202ENST00000358207 STAB2Q8WWQ8 2551 aa6.26□□□□□ -1.41
SMARCAL1-202ENST00000358207 IGLV4-60A0A075B6I1 120 aa6.26□□□□□ -1.41
SMARCAL1-202ENST00000358207 TRBV6-8A0A0A6YYG3 113 aa6.26□□□□□ -1.41
SMARCAL1-202ENST00000358207 ZCCHC13Q8WW36 166 aaKnown RBP6.26□□□□□ -1.41
SMARCAL1-202ENST00000358207 DIRC1Q969H9 104 aa6.26□□□□□ -1.41
SMARCAL1-202ENST00000358207 DNAH6Q9C0G6 4158 aa6.25□□□□□ -1.41
SMARCAL1-202ENST00000358207 LCE6AA0A183 80 aa6.25□□□□□ -1.41
SMARCAL1-202ENST00000358207 KRTAP10-11P60412 298 aa6.24□□□□□ -1.41
SMARCAL1-202ENST00000358207 TRGV1A0A0A0MS02 117 aa6.24□□□□□ -1.41
SMARCAL1-202ENST00000358207 C7orf65Q6ZTY9 151 aa6.24□□□□□ -1.41
SMARCAL1-202ENST00000358207 Q8NDZ9 215 aa6.24□□□□□ -1.41
SMARCAL1-202ENST00000358207 CYP4F30PQ9H0H9 118 aa6.24□□□□□ -1.41
SMARCAL1-202ENST00000358207 TENM2Q9NT68 2774 aa6.24□□□□□ -1.41
SMARCAL1-202ENST00000358207 IGKV3OR2-268A0A0C4DH90 116 aa6.24□□□□□ -1.41
SMARCAL1-202ENST00000358207 UBE2L6O14933 153 aa6.24□□□□□ -1.41
SMARCAL1-202ENST00000358207 PRR26Q8N8Z3 221 aa6.24□□□□□ -1.41
SMARCAL1-202ENST00000358207 NOP10Q9NPE3 64 aaKnown RBP6.24□□□□□ -1.41
SMARCAL1-202ENST00000358207 C3orf84H3BNL1 204 aa6.23□□□□□ -1.41
SMARCAL1-202ENST00000358207 DEFB135Q30KP9 77 aa6.23□□□□□ -1.41
SMARCAL1-202ENST00000358207 WWC2-AS2Q96NR7 200 aa6.23□□□□□ -1.41
SMARCAL1-202ENST00000358207 INSP01308 110 aa6.23□□□□□ -1.41
SMARCAL1-202ENST00000358207 GIG44P09565 113 aaPredicted RBP6.23□□□□□ -1.41
SMARCAL1-202ENST00000358207 PDE6GP18545 87 aa6.23□□□□□ -1.41
SMARCAL1-202ENST00000358207 Q6ZQY7 126 aa6.22□□□□□ -1.41
SMARCAL1-202ENST00000358207 SMIM29Q86T20 159 aa6.22□□□□□ -1.41
SMARCAL1-202ENST00000358207 Q8N9P0 234 aaPredicted RBP6.22□□□□□ -1.41
SMARCAL1-202ENST00000358207 C19orf73Q9NVV2 129 aa6.22□□□□□ -1.41
SMARCAL1-202ENST00000358207 HUWE1Q7Z6Z7 4374 aaKnown RBP6.22□□□□□ -1.41
SMARCAL1-202ENST00000358207 IGHV3OR16-9A0A0B4J2B5 98 aa6.22□□□□□ -1.41
SMARCAL1-202ENST00000358207 DEFB130BP0DP73 79 aa6.22□□□□□ -1.41
SMARCAL1-202ENST00000358207 DEFB130AP0DP74 79 aa6.22□□□□□ -1.41
SMARCAL1-202ENST00000358207 PRR15LQ9BU68 103 aa6.2□□□□□ -1.42
SMARCAL1-202ENST00000358207 LYSTQ99698 3801 aa6.19□□□□□ -1.42
SMARCAL1-202ENST00000358207 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.19□□□□□ -1.42
SMARCAL1-202ENST00000358207 TRGV2A0A075B6R0 118 aa6.19□□□□□ -1.42
SMARCAL1-202ENST00000358207 A0A096LPF7 62 aa6.19□□□□□ -1.42
SMARCAL1-202ENST00000358207 COL7A1Q02388 2944 aa6.18□□□□□ -1.42
SMARCAL1-202ENST00000358207 RYR2Q92736 4967 aa6.18□□□□□ -1.42
SMARCAL1-202ENST00000358207 TGP01266 2768 aa6.18□□□□□ -1.42
SMARCAL1-202ENST00000358207 LOC100131303A0A0U1RQF7 123 aa6.18□□□□□ -1.42
SMARCAL1-202ENST00000358207 HTN3P15516 51 aa6.18□□□□□ -1.42
SMARCAL1-202ENST00000358207 MOBPQ13875 183 aa6.18□□□□□ -1.42
SMARCAL1-202ENST00000358207 ST20-AS1Q8NBB2 130 aa6.18□□□□□ -1.42
SMARCAL1-202ENST00000358207 KLK12Q9UKR0 248 aa6.18□□□□□ -1.42
SMARCAL1-202ENST00000358207 A6NED7 52 aa6.17□□□□□ -1.42
SMARCAL1-202ENST00000358207 IGHV4-30-4P0DP06 118 aa6.16□□□□□ -1.42
SMARCAL1-202ENST00000358207 LIMD2Q9BT23 127 aa6.16□□□□□ -1.42
SMARCAL1-202ENST00000358207 COX7BP24311 80 aa6.15□□□□□ -1.42
SMARCAL1-202ENST00000358207 Q75L30 129 aa6.15□□□□□ -1.42
SMARCAL1-202ENST00000358207 PRAC1Q96KF2 57 aa6.15□□□□□ -1.42
SMARCAL1-202ENST00000358207 SACSQ9NZJ4 4579 aa6.14□□□□□ -1.43
SMARCAL1-202ENST00000358207 RYR3Q15413 4870 aa6.14□□□□□ -1.43
SMARCAL1-202ENST00000358207 CSNK1G2-AS1Q8NCQ2 148 aa6.14□□□□□ -1.43
SMARCAL1-202ENST00000358207 CDC42SE1Q9NRR8 79 aa6.14□□□□□ -1.43
SMARCAL1-202ENST00000358207 C9orf116Q5BN46 136 aaPredicted RBP6.14□□□□□ -1.43
SMARCAL1-202ENST00000358207 NKAPP1Q8N9T2 125 aa6.14□□□□□ -1.43
SMARCAL1-202ENST00000358207 KMT2CQ8NEZ4 4911 aaKnown RBP6.12□□□□□ -1.43
SMARCAL1-202ENST00000358207 TRGV4A0A0C4DH28 118 aa6.12□□□□□ -1.43
SMARCAL1-202ENST00000358207 CSMD3Q7Z407 3707 aa6.11□□□□□ -1.43
SMARCAL1-202ENST00000358207 LOC101927531A0A1B0GV80 90 aa6.11□□□□□ -1.43
SMARCAL1-202ENST00000358207 ETDCA0A1B0GVM5 59 aa6.11□□□□□ -1.43
SMARCAL1-202ENST00000358207 LINC00313P59037 77 aa6.11□□□□□ -1.43
SMARCAL1-202ENST00000358207 X6R8D5 127 aa6.1□□□□□ -1.43
SMARCAL1-202ENST00000358207 IGHV4-28A0A0C4DH34 117 aa6.1□□□□□ -1.43
SMARCAL1-202ENST00000358207 ADM2Q7Z4H4 148 aa6.1□□□□□ -1.43
SMARCAL1-202ENST00000358207 LINC00208Q96KT6 92 aa6.1□□□□□ -1.43
SMARCAL1-202ENST00000358207 LINC00959A0A1B0GUT2 108 aa6.09□□□□□ -1.43
SMARCAL1-202ENST00000358207 LINC01554Q52M75 96 aa6.09□□□□□ -1.43
SMARCAL1-202ENST00000358207 Q8IZM0 81 aa6.09□□□□□ -1.43
SMARCAL1-202ENST00000358207 C16orf74Q96GX8 76 aa6.09□□□□□ -1.44
SMARCAL1-202ENST00000358207 IGLV6-57P01721 117 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms