RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 LINC00528Q8N1L1 170 aa6.81□□□□□ -1.32
SPTAN1-201ENST00000358161 CR1P17927 2039 aa6.8□□□□□ -1.32
SPTAN1-201ENST00000358161 SSBP3-AS1Q7Z2R9 100 aa6.8□□□□□ -1.32
SPTAN1-201ENST00000358161 LINC00304Q8N9R0 145 aa6.8□□□□□ -1.32
SPTAN1-201ENST00000358161 A0A1B0GU69 56 aa6.79□□□□□ -1.32
SPTAN1-201ENST00000358161 C9orf129Q5T035 196 aaKnown RBP6.79□□□□□ -1.32
SPTAN1-201ENST00000358161 LOC101927531A0A1B0GV80 90 aa6.78□□□□□ -1.32
SPTAN1-201ENST00000358161 PMAIP1Q13794 54 aa6.78□□□□□ -1.32
SPTAN1-201ENST00000358161 CNBPP62633 177 aaKnown RBP6.77□□□□□ -1.33
SPTAN1-201ENST00000358161 ZNF575Q86XF7 245 aa6.77□□□□□ -1.33
SPTAN1-201ENST00000358161 MRPL34Q9BQ48 92 aaKnown RBP6.76□□□□□ -1.33
SPTAN1-201ENST00000358161 USP24Q9UPU5 2620 aa6.76□□□□□ -1.33
SPTAN1-201ENST00000358161 CEP350Q5VT06 3117 aa6.76□□□□□ -1.33
SPTAN1-201ENST00000358161 FLNAP21333 2647 aaKnown RBP6.76□□□□□ -1.33
SPTAN1-201ENST00000358161 C1orf195Q5TG92 126 aa6.76□□□□□ -1.33
SPTAN1-201ENST00000358161 IGFL1Q6UW32 110 aa6.75□□□□□ -1.33
SPTAN1-201ENST00000358161 HELZ2Q9BYK8 2649 aaKnown RBP6.75□□□□□ -1.33
SPTAN1-201ENST00000358161 IGLV7-43P04211 117 aa6.74□□□□□ -1.33
SPTAN1-201ENST00000358161 C5orf42Q9H799 3197 aa6.74□□□□□ -1.33
SPTAN1-201ENST00000358161 BPTFQ12830 3046 aa6.73□□□□□ -1.33
SPTAN1-201ENST00000358161 ITPR3Q14573 2671 aa6.73□□□□□ -1.33
SPTAN1-201ENST00000358161 K7EQZ3 153 aa6.73□□□□□ -1.33
SPTAN1-201ENST00000358161 CHD7Q9P2D1 2997 aa6.73□□□□□ -1.33
SPTAN1-201ENST00000358161 SMR3BP02814 79 aaPredicted RBP6.71□□□□□ -1.33
SPTAN1-201ENST00000358161 Q8N377 158 aa6.71□□□□□ -1.33
SPTAN1-201ENST00000358161 PSORS1C2Q9UIG4 136 aa6.71□□□□□ -1.34
SPTAN1-201ENST00000358161 MGAM2Q2M2H8 2515 aa6.7□□□□□ -1.34
SPTAN1-201ENST00000358161 WIPF1O43516 503 aa6.7□□□□□ -1.34
SPTAN1-201ENST00000358161 A0A1W2PNN7 141 aa6.7□□□□□ -1.34
SPTAN1-201ENST00000358161 A0A1B0GVX0 72 aa6.69□□□□□ -1.34
SPTAN1-201ENST00000358161 PRR15Q8IV56 129 aa6.69□□□□□ -1.34
SPTAN1-201ENST00000358161 ERC2-IT1O76042 136 aa6.69□□□□□ -1.34
SPTAN1-201ENST00000358161 COX6B2Q6YFQ2 88 aa6.69□□□□□ -1.34
SPTAN1-201ENST00000358161 C8orf17Q9NRJ1 99 aa6.69□□□□□ -1.34
SPTAN1-201ENST00000358161 DSCR10P59022 87 aa6.68□□□□□ -1.34
SPTAN1-201ENST00000358161 EIF4EBP3O60516 100 aaPredicted RBP6.68□□□□□ -1.34
SPTAN1-201ENST00000358161 CASC10Q5T4H9 136 aa6.68□□□□□ -1.34
SPTAN1-201ENST00000358161 CFAP46Q8IYW2 2715 aa6.67□□□□□ -1.34
SPTAN1-201ENST00000358161 SPRR4Q96PI1 79 aa6.67□□□□□ -1.34
SPTAN1-201ENST00000358161 OBSCN-AS1Q96MR7 158 aa6.67□□□□□ -1.34
SPTAN1-201ENST00000358161 IGLV5-37A0A075B6J1 123 aa6.67□□□□□ -1.34
SPTAN1-201ENST00000358161 C9orf92A6NGG3 77 aa6.64□□□□□ -1.35
SPTAN1-201ENST00000358161 RPS28P62857 69 aaKnown RBP6.63□□□□□ -1.35
SPTAN1-201ENST00000358161 ANAPC11Q9NYG5 84 aa6.63□□□□□ -1.35
SPTAN1-201ENST00000358161 ATRQ13535 2644 aa6.61□□□□□ -1.35
SPTAN1-201ENST00000358161 TNP2Q05952 138 aa6.61□□□□□ -1.35
SPTAN1-201ENST00000358161 CHD9Q3L8U1 2897 aa6.6□□□□□ -1.35
SPTAN1-201ENST00000358161 RBM12B-AS1Q9P1G2 102 aa6.6□□□□□ -1.35
SPTAN1-201ENST00000358161 MAST4O15021 2626 aa6.59□□□□□ -1.35
SPTAN1-201ENST00000358161 COA5Q86WW8 74 aa6.58□□□□□ -1.36
SPTAN1-201ENST00000358161 TRANK1O15050 2925 aa6.58□□□□□ -1.36
SPTAN1-201ENST00000358161 IGLV8-61A0A075B6I0 122 aa6.57□□□□□ -1.36
SPTAN1-201ENST00000358161 CD164Q04900 197 aa6.57□□□□□ -1.36
SPTAN1-201ENST00000358161 A0A0G2JQZ4 141 aa6.57□□□□□ -1.36
SPTAN1-201ENST00000358161 HTTP42858 3142 aa6.56□□□□□ -1.36
SPTAN1-201ENST00000358161 PCNTO95613 3336 aa6.55□□□□□ -1.36
SPTAN1-201ENST00000358161 IGLV5-48A0A075B6I7 105 aa6.55□□□□□ -1.36
SPTAN1-201ENST00000358161 LINC01600Q96MT4 127 aa6.54□□□□□ -1.36
SPTAN1-201ENST00000358161 PRO0628Q9UI54 55 aa6.54□□□□□ -1.36
SPTAN1-201ENST00000358161 A0A1W2PNM2 257 aa6.54□□□□□ -1.36
SPTAN1-201ENST00000358161 KLKP1Q107X0 134 aa6.52□□□□□ -1.37
SPTAN1-201ENST00000358161 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.52□□□□□ -1.37
SPTAN1-201ENST00000358161 UQCR11O14957 56 aa6.52□□□□□ -1.37
SPTAN1-201ENST00000358161 FAM229BQ4G0N7 80 aa6.52□□□□□ -1.37
SPTAN1-201ENST00000358161 CYP4F30PQ9H0H9 118 aa6.51□□□□□ -1.37
SPTAN1-201ENST00000358161 ZNF292O60281 2723 aa6.51□□□□□ -1.37
SPTAN1-201ENST00000358161 CENPEQ02224 2701 aa6.5□□□□□ -1.37
SPTAN1-201ENST00000358161 PLAC8Q9NZF1 115 aa6.49□□□□□ -1.37
SPTAN1-201ENST00000358161 C4orf26Q17RF5 130 aa6.49□□□□□ -1.37
SPTAN1-201ENST00000358161 RANBP2P49792 3224 aaKnown RBP6.47□□□□□ -1.37
SPTAN1-201ENST00000358161 IGLV7-46A0A075B6I9 117 aa6.46□□□□□ -1.37
SPTAN1-201ENST00000358161 FAM104AQ969W3 186 aa6.46□□□□□ -1.38
SPTAN1-201ENST00000358161 Q6ZSA8 131 aa6.46□□□□□ -1.38
SPTAN1-201ENST00000358161 PRR26Q8N8Z3 221 aa6.45□□□□□ -1.38
SPTAN1-201ENST00000358161 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
SPTAN1-201ENST00000358161 MIR22HGQ0VDD5 57 aa6.43□□□□□ -1.38
SPTAN1-201ENST00000358161 MGAQ8IWI9 3026 aa6.43□□□□□ -1.38
SPTAN1-201ENST00000358161 A8MUN3 132 aa6.43□□□□□ -1.38
SPTAN1-201ENST00000358161 MKI67P46013 3256 aaKnown RBP6.41□□□□□ -1.38
SPTAN1-201ENST00000358161 H7BZZ5 65 aa6.4□□□□□ -1.38
SPTAN1-201ENST00000358161 Q8N1X5 172 aa6.4□□□□□ -1.38
SPTAN1-201ENST00000358161 TEX15Q9BXT5 2789 aa6.4□□□□□ -1.39
SPTAN1-201ENST00000358161 SPRR1AP35321 89 aa6.4□□□□□ -1.39
SPTAN1-201ENST00000358161 LAMA3Q16787 3333 aa6.39□□□□□ -1.39
SPTAN1-201ENST00000358161 LCE6AA0A183 80 aa6.39□□□□□ -1.39
SPTAN1-201ENST00000358161 CRIPTQ9P021 101 aa6.39□□□□□ -1.39
SPTAN1-201ENST00000358161 SPINT4Q6UDR6 99 aa6.36□□□□□ -1.39
SPTAN1-201ENST00000358161 AKAP13Q12802 2813 aa6.35□□□□□ -1.39
SPTAN1-201ENST00000358161 TEP1Q99973 2627 aaKnown RBP6.35□□□□□ -1.39
SPTAN1-201ENST00000358161 KRTAP1-5Q9BYS1 174 aa6.34□□□□□ -1.39
SPTAN1-201ENST00000358161 OCR1Q9BZK8 76 aa6.34□□□□□ -1.39
SPTAN1-201ENST00000358161 CHD6Q8TD26 2715 aa6.34□□□□□ -1.4
SPTAN1-201ENST00000358161 SPRR1BP22528 89 aa6.33□□□□□ -1.4
SPTAN1-201ENST00000358161 LINC01554Q52M75 96 aa6.33□□□□□ -1.4
SPTAN1-201ENST00000358161 CFAP54Q96N23 3096 aa6.33□□□□□ -1.4
SPTAN1-201ENST00000358161 BAHCC1Q9P281 2608 aa6.32□□□□□ -1.4
SPTAN1-201ENST00000358161 Q5VSD8 79 aa6.32□□□□□ -1.4
SPTAN1-201ENST00000358161 STAB1Q9NY15 2570 aa6.32□□□□□ -1.4
SPTAN1-201ENST00000358161 ZCCHC13Q8WW36 166 aaKnown RBP6.31□□□□□ -1.4
SPTAN1-201ENST00000358161 KRTAP26-1Q6PEX3 210 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms