RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 LTBP2Q14767 1821 aa3.84□□□□□ -1.79
BRCA1-203ENST00000357654 S4R3F8 94 aa3.84□□□□□ -1.79
BRCA1-203ENST00000357654 NOTCH2Q04721 2471 aa3.84□□□□□ -1.8
BRCA1-203ENST00000357654 A0A1B0GVX0 72 aa3.83□□□□□ -1.8
BRCA1-203ENST00000357654 FAM104AQ969W3 186 aa3.83□□□□□ -1.8
BRCA1-203ENST00000357654 MYO15AQ9UKN7 3530 aa3.83□□□□□ -1.8
BRCA1-203ENST00000357654 GVQW2A0A096LPI5 108 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-203ENST00000357654 IGFL1Q6UW32 110 aa3.83□□□□□ -1.8
BRCA1-203ENST00000357654 CEP192Q8TEP8 1941 aa3.83□□□□□ -1.8
BRCA1-203ENST00000357654 EYSQ5T1H1 3165 aa3.83□□□□□ -1.8
BRCA1-203ENST00000357654 H3BNG1 76 aa3.82□□□□□ -1.8
BRCA1-203ENST00000357654 H3BPC8 53 aa3.82□□□□□ -1.8
BRCA1-203ENST00000357654 LRP4O75096 1905 aa3.82□□□□□ -1.8
BRCA1-203ENST00000357654 FAM218AQ96MZ4 157 aa3.82□□□□□ -1.8
BRCA1-203ENST00000357654 LAMA3Q16787 3333 aa3.82□□□□□ -1.8
BRCA1-203ENST00000357654 TNP2Q05952 138 aa3.82□□□□□ -1.8
BRCA1-203ENST00000357654 MUC3AQ02505 3323 aa3.81□□□□□ -1.8
BRCA1-203ENST00000357654 MUC22E2RYF6 1773 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-203ENST00000357654 CD164Q04900 197 aa3.8□□□□□ -1.8
BRCA1-203ENST00000357654 CASC10Q5T4H9 136 aa3.8□□□□□ -1.8
BRCA1-203ENST00000357654 LINC00612Q8N6U2 182 aa3.8□□□□□ -1.8
BRCA1-203ENST00000357654 R4GN34 69 aa3.8□□□□□ -1.8
BRCA1-203ENST00000357654 USP34Q70CQ2 3546 aa3.8□□□□□ -1.8
BRCA1-203ENST00000357654 WDFY3Q8IZQ1 3526 aa3.8□□□□□ -1.8
BRCA1-203ENST00000357654 ADAMTS20P59510 1910 aa3.79□□□□□ -1.8
BRCA1-203ENST00000357654 PKD1L2Q7Z442 2459 aa3.79□□□□□ -1.8
BRCA1-203ENST00000357654 PRR15Q8IV56 129 aa3.79□□□□□ -1.8
BRCA1-203ENST00000357654 C10orf142B7Z368 130 aa3.79□□□□□ -1.8
BRCA1-203ENST00000357654 LCA10Q71F78 164 aa3.79□□□□□ -1.8
BRCA1-203ENST00000357654 EML5Q05BV3 1969 aa3.79□□□□□ -1.8
BRCA1-203ENST00000357654 NAV3Q8IVL0 2385 aa3.79□□□□□ -1.8
BRCA1-203ENST00000357654 PRO0628Q9UI54 55 aa3.79□□□□□ -1.8
BRCA1-203ENST00000357654 CSAG1Q6PB30 78 aa3.78□□□□□ -1.8
BRCA1-203ENST00000357654 BDP1A6H8Y1 2624 aa3.78□□□□□ -1.8
BRCA1-203ENST00000357654 SPINK7P58062 85 aa3.78□□□□□ -1.81
BRCA1-203ENST00000357654 Q1T7F1 81 aa3.77□□□□□ -1.81
BRCA1-203ENST00000357654 CNFNQ9BYD5 112 aa3.76□□□□□ -1.81
BRCA1-203ENST00000357654 SEC61BP60468 96 aaKnown RBP3.76□□□□□ -1.81
BRCA1-203ENST00000357654 RANBP2P49792 3224 aaKnown RBP3.75□□□□□ -1.81
BRCA1-203ENST00000357654 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
BRCA1-203ENST00000357654 CRIP3Q6Q6R5 217 aa3.74□□□□□ -1.81
BRCA1-203ENST00000357654 MYO9AB2RTY4 2548 aa3.74□□□□□ -1.81
BRCA1-203ENST00000357654 MYO18BQ8IUG5 2567 aa3.74□□□□□ -1.81
BRCA1-203ENST00000357654 LOC110117498A0A087WWA1 95 aa3.74□□□□□ -1.81
BRCA1-203ENST00000357654 URB1-AS1Q96HZ7 61 aa3.74□□□□□ -1.81
BRCA1-203ENST00000357654 M0QZ58 72 aa3.74□□□□□ -1.81
BRCA1-203ENST00000357654 SPRR4Q96PI1 79 aa3.74□□□□□ -1.81
BRCA1-203ENST00000357654 A0A1B0GU33 70 aa3.73□□□□□ -1.81
BRCA1-203ENST00000357654 KRTAP10-3P60369 221 aa3.73□□□□□ -1.81
BRCA1-203ENST00000357654 ZFHX4Q86UP3 3567 aa3.71□□□□□ -1.82
BRCA1-203ENST00000357654 CPAMD8Q8IZJ3 1885 aa3.71□□□□□ -1.82
BRCA1-203ENST00000357654 A0A1B0GW54 56 aa3.71□□□□□ -1.82
BRCA1-203ENST00000357654 COL27A1Q8IZC6 1860 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-203ENST00000357654 CYP4F30PQ9H0H9 118 aa3.71□□□□□ -1.82
BRCA1-203ENST00000357654 C2CD3Q4AC94 2353 aa3.71□□□□□ -1.82
BRCA1-203ENST00000357654 CFAP54Q96N23 3096 aa3.7□□□□□ -1.82
BRCA1-203ENST00000357654 VCANP13611 3396 aa3.7□□□□□ -1.82
BRCA1-203ENST00000357654 KCNQ1DNQ9H478 68 aa3.7□□□□□ -1.82
BRCA1-203ENST00000357654 Q8N377 158 aa3.69□□□□□ -1.82
BRCA1-203ENST00000357654 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.69□□□□□ -1.82
BRCA1-203ENST00000357654 PTPRBP23467 1997 aa3.69□□□□□ -1.82
BRCA1-203ENST00000357654 C19orf73Q9NVV2 129 aa3.69□□□□□ -1.82
BRCA1-203ENST00000357654 BSNQ9UPA5 3926 aa3.68□□□□□ -1.82
BRCA1-203ENST00000357654 A0A096LNJ9 63 aa3.67□□□□□ -1.82
BRCA1-203ENST00000357654 KLKP1Q107X0 134 aa3.67□□□□□ -1.82
BRCA1-203ENST00000357654 C20orf166-AS1Q96NR2 134 aa3.67□□□□□ -1.82
BRCA1-203ENST00000357654 FASNP49327 2511 aaKnown RBP3.67□□□□□ -1.82
BRCA1-203ENST00000357654 LRRK2Q5S007 2527 aa3.67□□□□□ -1.82
BRCA1-203ENST00000357654 H7BZZ5 65 aa3.66□□□□□ -1.82
BRCA1-203ENST00000357654 A0A1W2PNM2 257 aa3.66□□□□□ -1.82
BRCA1-203ENST00000357654 ADM2Q7Z4H4 148 aa3.66□□□□□ -1.82
BRCA1-203ENST00000357654 F8P00451 2351 aa3.65□□□□□ -1.82
BRCA1-203ENST00000357654 MTORP42345 2549 aa3.65□□□□□ -1.82
BRCA1-203ENST00000357654 ZCCHC13Q8WW36 166 aaKnown RBP3.65□□□□□ -1.83
BRCA1-203ENST00000357654 DMAC1Q96GE9 116 aa3.64□□□□□ -1.83
BRCA1-203ENST00000357654 KLK9Q2XQG4 91 aa3.64□□□□□ -1.83
BRCA1-203ENST00000357654 SPEGQ15772 3267 aa3.64□□□□□ -1.83
BRCA1-203ENST00000357654 DNAH14Q0VDD8 3507 aa3.63□□□□□ -1.83
BRCA1-203ENST00000357654 LINC00310P59036 64 aa3.63□□□□□ -1.83
BRCA1-203ENST00000357654 PCSK5Q92824 1860 aa3.62□□□□□ -1.83
BRCA1-203ENST00000357654 NAV2Q8IVL1 2488 aa3.62□□□□□ -1.83
BRCA1-203ENST00000357654 OXTP01178 125 aa3.62□□□□□ -1.83
BRCA1-203ENST00000357654 FRYLO94915 3013 aa3.61□□□□□ -1.83
BRCA1-203ENST00000357654 TRIOO75962 3097 aa3.61□□□□□ -1.83
BRCA1-203ENST00000357654 SMCPP49901 116 aaPredicted RBP3.61□□□□□ -1.83
BRCA1-203ENST00000357654 FN1P02751 2386 aaKnown RBP3.6□□□□□ -1.83
BRCA1-203ENST00000357654 EPG5Q9HCE0 2579 aa3.6□□□□□ -1.83
BRCA1-203ENST00000357654 GIG44P09565 113 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-203ENST00000357654 TLN1Q9Y490 2541 aaKnown RBP3.6□□□□□ -1.83
BRCA1-203ENST00000357654 CNBPP62633 177 aaKnown RBP3.6□□□□□ -1.83
BRCA1-203ENST00000357654 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
BRCA1-203ENST00000357654 COX8CQ7Z4L0 72 aa3.59□□□□□ -1.83
BRCA1-203ENST00000357654 ANKHD1Q8IWZ3 2542 aaKnown RBP3.59□□□□□ -1.84
BRCA1-203ENST00000357654 ROMO1P60602 79 aa3.59□□□□□ -1.84
BRCA1-203ENST00000357654 Q8N9P0 234 aaPredicted RBP3.59□□□□□ -1.84
BRCA1-203ENST00000357654 NCOR2Q9Y618 2525 aa3.59□□□□□ -1.84
BRCA1-203ENST00000357654 FLNBO75369 2602 aaKnown RBP3.58□□□□□ -1.84
BRCA1-203ENST00000357654 LINC01546A6NGU7 62 aa3.58□□□□□ -1.84
BRCA1-203ENST00000357654 JMJD1CQ15652 2540 aa3.58□□□□□ -1.84
BRCA1-203ENST00000357654 LCE6AA0A183 80 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms