RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 LINC00612Q8N6U2 182 aa5.53□□□□□ -1.52
CDC42SE1-201ENST00000357235 C1orf64Q8NEQ6 169 aa5.53□□□□□ -1.52
CDC42SE1-201ENST00000357235 C9orf66Q5T8R8 295 aa5.53□□□□□ -1.52
CDC42SE1-201ENST00000357235 KTN1-AS1Q86SY8 53 aa5.53□□□□□ -1.52
CDC42SE1-201ENST00000357235 MUC7Q8TAX7 377 aa5.53□□□□□ -1.52
CDC42SE1-201ENST00000357235 LYRM9A8MSI8 78 aa5.52□□□□□ -1.53
CDC42SE1-201ENST00000357235 KRTAP10-3P60369 221 aa5.52□□□□□ -1.53
CDC42SE1-201ENST00000357235 C4orf48Q5BLP8 95 aa5.52□□□□□ -1.53
CDC42SE1-201ENST00000357235 Q8N9L7 120 aa5.52□□□□□ -1.53
CDC42SE1-201ENST00000357235 ZNF73O43830 326 aaPredicted RBP5.52□□□□□ -1.53
CDC42SE1-201ENST00000357235 TEP1Q99973 2627 aaKnown RBP5.52□□□□□ -1.53
CDC42SE1-201ENST00000357235 CAMK2N2Q96S95 79 aa5.51□□□□□ -1.53
CDC42SE1-201ENST00000357235 IGLV6-57P01721 117 aa5.51□□□□□ -1.53
CDC42SE1-201ENST00000357235 UBE2BP63146 152 aa5.51□□□□□ -1.53
CDC42SE1-201ENST00000357235 DEFB105AQ8NG35 78 aa5.51□□□□□ -1.53
CDC42SE1-201ENST00000357235 C6orf48Q9UBA6 75 aa5.51□□□□□ -1.53
CDC42SE1-201ENST00000357235 COX7BP24311 80 aa5.5□□□□□ -1.53
CDC42SE1-201ENST00000357235 KRTAP1-1Q07627 177 aa5.5□□□□□ -1.53
CDC42SE1-201ENST00000357235 A8MUN3 132 aa5.5□□□□□ -1.53
CDC42SE1-201ENST00000357235 SYCNQ0VAF6 134 aa5.5□□□□□ -1.53
CDC42SE1-201ENST00000357235 TRRAPQ9Y4A5 3859 aa5.49□□□□□ -1.53
CDC42SE1-201ENST00000357235 SPART-AS1P0CW21 52 aa5.49□□□□□ -1.53
CDC42SE1-201ENST00000357235 LELP1Q5T871 98 aa5.49□□□□□ -1.53
CDC42SE1-201ENST00000357235 C3orf84H3BNL1 204 aa5.49□□□□□ -1.53
CDC42SE1-201ENST00000357235 H3BQ85 93 aa5.49□□□□□ -1.53
CDC42SE1-201ENST00000357235 APOC4P55056 127 aa5.49□□□□□ -1.53
CDC42SE1-201ENST00000357235 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.49□□□□□ -1.53
CDC42SE1-201ENST00000357235 LINC00588Q9Y4M8 146 aa5.49□□□□□ -1.53
CDC42SE1-201ENST00000357235 TENM1Q9UKZ4 2725 aa5.49□□□□□ -1.53
CDC42SE1-201ENST00000357235 OTOGQ6ZRI0 2925 aa5.49□□□□□ -1.53
CDC42SE1-201ENST00000357235 A0A0J9YWU9 116 aa5.48□□□□□ -1.53
CDC42SE1-201ENST00000357235 IGHV4-30-4P0DP06 118 aa5.48□□□□□ -1.53
CDC42SE1-201ENST00000357235 HIVEP1P15822 2718 aa5.48□□□□□ -1.53
CDC42SE1-201ENST00000357235 A8MU10 97 aa5.48□□□□□ -1.53
CDC42SE1-201ENST00000357235 IGKV4-1P06312 121 aa5.48□□□□□ -1.53
CDC42SE1-201ENST00000357235 M0R378 163 aa5.48□□□□□ -1.53
CDC42SE1-201ENST00000357235 WFDC10BQ8IUB3 73 aa5.48□□□□□ -1.53
CDC42SE1-201ENST00000357235 SPTSSBQ8NFR3 76 aa5.48□□□□□ -1.53
CDC42SE1-201ENST00000357235 PKD1L1Q8TDX9 2849 aa5.47□□□□□ -1.53
CDC42SE1-201ENST00000357235 Q8NAQ8 132 aa5.46□□□□□ -1.53
CDC42SE1-201ENST00000357235 PSCAO43653 123 aa5.45□□□□□ -1.54
CDC42SE1-201ENST00000357235 NDUFS5O43920 106 aa5.45□□□□□ -1.54
CDC42SE1-201ENST00000357235 UBE2AP49459 152 aa5.45□□□□□ -1.54
CDC42SE1-201ENST00000357235 C11orf45Q8TAV5 145 aa5.45□□□□□ -1.54
CDC42SE1-201ENST00000357235 FAM30AQ9NZY2 134 aa5.45□□□□□ -1.54
CDC42SE1-201ENST00000357235 CHKB-CPT1BH3BT56 60 aa5.45□□□□□ -1.54
CDC42SE1-201ENST00000357235 ELOF1P60002 83 aaKnown RBP5.45□□□□□ -1.54
CDC42SE1-201ENST00000357235 PRR34Q9NV39 138 aa5.45□□□□□ -1.54
CDC42SE1-201ENST00000357235 IGKV2D-24A0A075B6R9 120 aa5.45□□□□□ -1.54
CDC42SE1-201ENST00000357235 PRR4Q16378 134 aa5.45□□□□□ -1.54
CDC42SE1-201ENST00000357235 ANK3Q12955 4377 aaKnown RBP5.44□□□□□ -1.54
CDC42SE1-201ENST00000357235 PRB2P02812 416 aaPredicted RBP5.44□□□□□ -1.54
CDC42SE1-201ENST00000357235 Q5VV11 94 aa5.44□□□□□ -1.54
CDC42SE1-201ENST00000357235 VPREB1P12018 145 aa5.44□□□□□ -1.54
CDC42SE1-201ENST00000357235 C16orf90A8MZG2 172 aa5.43□□□□□ -1.54
CDC42SE1-201ENST00000357235 KPRPQ5T749 579 aaPredicted RBP5.42□□□□□ -1.54
CDC42SE1-201ENST00000357235 SMIM29Q86T20 159 aa5.42□□□□□ -1.54
CDC42SE1-201ENST00000357235 NKAPP1Q8N9T2 125 aa5.42□□□□□ -1.54
CDC42SE1-201ENST00000357235 RPL37AP8A6NKH3 93 aa5.42□□□□□ -1.54
CDC42SE1-201ENST00000357235 ATP11AUNQ6ZP68 121 aa5.42□□□□□ -1.54
CDC42SE1-201ENST00000357235 GVQW2A0A096LPI5 108 aaPredicted RBP5.42□□□□□ -1.54
CDC42SE1-201ENST00000357235 INAFM1C9JVW0 142 aa5.42□□□□□ -1.54
CDC42SE1-201ENST00000357235 CYP4F30PQ9H0H9 118 aa5.42□□□□□ -1.54
CDC42SE1-201ENST00000357235 HCG22E2RYF7 251 aa5.41□□□□□ -1.54
CDC42SE1-201ENST00000357235 EGFEM1PQ0D2K5 195 aa5.41□□□□□ -1.54
CDC42SE1-201ENST00000357235 PHF5AQ7RTV0 110 aaKnown RBP5.4□□□□□ -1.54
CDC42SE1-201ENST00000357235 LINC00528Q8N1L1 170 aa5.4□□□□□ -1.54
CDC42SE1-201ENST00000357235 LCE6AA0A183 80 aa5.4□□□□□ -1.55
CDC42SE1-201ENST00000357235 ZCCHC13Q8WW36 166 aaKnown RBP5.4□□□□□ -1.55
CDC42SE1-201ENST00000357235 C15orf56Q8N910 161 aa5.39□□□□□ -1.55
CDC42SE1-201ENST00000357235 LIMD2Q9BT23 127 aa5.39□□□□□ -1.55
CDC42SE1-201ENST00000357235 OXLD1Q5BKU9 147 aa5.38□□□□□ -1.55
CDC42SE1-201ENST00000357235 PRR15LQ9BU68 103 aa5.38□□□□□ -1.55
CDC42SE1-201ENST00000357235 ETDCA0A1B0GVM5 59 aa5.38□□□□□ -1.55
CDC42SE1-201ENST00000357235 SERTAD4-AS1Q5TG53 156 aa5.38□□□□□ -1.55
CDC42SE1-201ENST00000357235 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.37□□□□□ -1.55
CDC42SE1-201ENST00000357235 A6NED7 52 aa5.37□□□□□ -1.55
CDC42SE1-201ENST00000357235 NDUFB1O75438 58 aa5.37□□□□□ -1.55
CDC42SE1-201ENST00000357235 A6NN06 94 aa5.37□□□□□ -1.55
CDC42SE1-201ENST00000357235 FAM168BA1KXE4 195 aa5.37□□□□□ -1.55
CDC42SE1-201ENST00000357235 C7orf65Q6ZTY9 151 aa5.37□□□□□ -1.55
CDC42SE1-201ENST00000357235 C7orf33Q8WU49 177 aa5.37□□□□□ -1.55
CDC42SE1-201ENST00000357235 NSD1Q96L73 2696 aaPredicted RBP5.36□□□□□ -1.55
CDC42SE1-201ENST00000357235 C8orf87E5RJ46 101 aa5.36□□□□□ -1.55
CDC42SE1-201ENST00000357235 LCA10Q71F78 164 aa5.36□□□□□ -1.55
CDC42SE1-201ENST00000357235 Q8N377 158 aa5.36□□□□□ -1.55
CDC42SE1-201ENST00000357235 Q8N9P0 234 aaPredicted RBP5.36□□□□□ -1.55
CDC42SE1-201ENST00000357235 ST20-AS1Q8NBB2 130 aa5.36□□□□□ -1.55
CDC42SE1-201ENST00000357235 TENM3Q9P273 2699 aa5.36□□□□□ -1.55
CDC42SE1-201ENST00000357235 B9D2Q9BPU9 175 aa5.35□□□□□ -1.55
CDC42SE1-201ENST00000357235 NOTCH1P46531 2555 aa5.35□□□□□ -1.55
CDC42SE1-201ENST00000357235 A0A0G2JQZ4 141 aa5.34□□□□□ -1.55
CDC42SE1-201ENST00000357235 A0A1W2PNN7 141 aa5.34□□□□□ -1.55
CDC42SE1-201ENST00000357235 H3BS24 57 aa5.34□□□□□ -1.55
CDC42SE1-201ENST00000357235 C1orf137Q5JT78 98 aa5.34□□□□□ -1.55
CDC42SE1-201ENST00000357235 KRTAP26-1Q6PEX3 210 aa5.34□□□□□ -1.55
CDC42SE1-201ENST00000357235 DEFB116Q30KQ4 102 aa5.34□□□□□ -1.56
CDC42SE1-201ENST00000357235 DEFB131BA0A096LNP1 70 aa5.33□□□□□ -1.56
CDC42SE1-201ENST00000357235 LINC00208Q96KT6 92 aa5.33□□□□□ -1.56
CDC42SE1-201ENST00000357235 A0A1W2PNM2 257 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms