RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 SPTSSBQ8NFR3 76 aa5.67□□□□□ -1.5
GM2A-201ENST00000357164 LINC01006Q8NI28 216 aa5.66□□□□□ -1.5
GM2A-201ENST00000357164 CCL24O00175 119 aa5.66□□□□□ -1.5
GM2A-201ENST00000357164 DEFB116Q30KQ4 102 aa5.66□□□□□ -1.5
GM2A-201ENST00000357164 C16orf74Q96GX8 76 aa5.66□□□□□ -1.5
GM2A-201ENST00000357164 CSMD3Q7Z407 3707 aa5.65□□□□□ -1.5
GM2A-201ENST00000357164 DEFB135Q30KP9 77 aa5.65□□□□□ -1.5
GM2A-201ENST00000357164 C10orf25Q5T742 122 aa5.65□□□□□ -1.5
GM2A-201ENST00000357164 PSPHP1O15172 72 aa5.65□□□□□ -1.51
GM2A-201ENST00000357164 COX7BP24311 80 aa5.65□□□□□ -1.51
GM2A-201ENST00000357164 HELZ2Q9BYK8 2649 aaKnown RBP5.64□□□□□ -1.51
GM2A-201ENST00000357164 UNQ6190/PRO20217Q6UXQ8 127 aa5.64□□□□□ -1.51
GM2A-201ENST00000357164 LINC01356Q8N9X3 169 aa5.64□□□□□ -1.51
GM2A-201ENST00000357164 HIGD2AQ9BW72 106 aa5.64□□□□□ -1.51
GM2A-201ENST00000357164 IGLV5-48A0A075B6I7 105 aa5.64□□□□□ -1.51
GM2A-201ENST00000357164 C1orf64Q8NEQ6 169 aa5.64□□□□□ -1.51
GM2A-201ENST00000357164 SPAG11BQ08648 103 aa5.63□□□□□ -1.51
GM2A-201ENST00000357164 FAM30AQ9NZY2 134 aa5.63□□□□□ -1.51
GM2A-201ENST00000357164 PMAIP1Q13794 54 aa5.62□□□□□ -1.51
GM2A-201ENST00000357164 NSD1Q96L73 2696 aaPredicted RBP5.62□□□□□ -1.51
GM2A-201ENST00000357164 CMYA5Q8N3K9 4069 aa5.62□□□□□ -1.51
GM2A-201ENST00000357164 CHCHD10Q8WYQ3 142 aaPredicted RBP5.62□□□□□ -1.51
GM2A-201ENST00000357164 A8MU10 97 aa5.61□□□□□ -1.51
GM2A-201ENST00000357164 FUSP35637 526 aaKnown RBP eCLIP5.61□□□□□ -1.51
GM2A-201ENST00000357164 PRR34Q9NV39 138 aa5.61□□□□□ -1.51
GM2A-201ENST00000357164 DNAH3Q8TD57 4116 aa5.6□□□□□ -1.51
GM2A-201ENST00000357164 CAMK2N2Q96S95 79 aa5.6□□□□□ -1.51
GM2A-201ENST00000357164 TRAV22A0A0B4J277 110 aa5.6□□□□□ -1.51
GM2A-201ENST00000357164 IGKV2D-24A0A075B6R9 120 aa5.6□□□□□ -1.51
GM2A-201ENST00000357164 A0A1B0GW54 56 aa5.6□□□□□ -1.51
GM2A-201ENST00000357164 VPREB1P12018 145 aa5.6□□□□□ -1.51
GM2A-201ENST00000357164 Q5VV11 94 aa5.6□□□□□ -1.51
GM2A-201ENST00000357164 KRTAP26-1Q6PEX3 210 aa5.6□□□□□ -1.51
GM2A-201ENST00000357164 H3BS24 57 aa5.59□□□□□ -1.51
GM2A-201ENST00000357164 PSCAO43653 123 aa5.59□□□□□ -1.51
GM2A-201ENST00000357164 KRTAP3-3Q9BYR6 98 aa5.59□□□□□ -1.51
GM2A-201ENST00000357164 KRTAP3-2Q9BYR7 98 aa5.59□□□□□ -1.51
GM2A-201ENST00000357164 PDZD2O15018 2839 aa5.59□□□□□ -1.51
GM2A-201ENST00000357164 REG3AQ06141 175 aa5.59□□□□□ -1.52
GM2A-201ENST00000357164 RPL37AP8A6NKH3 93 aa5.58□□□□□ -1.52
GM2A-201ENST00000357164 KRTAP4-16G5E9R7 235 aaPredicted RBP5.58□□□□□ -1.52
GM2A-201ENST00000357164 DSCR10P59022 87 aa5.58□□□□□ -1.52
GM2A-201ENST00000357164 WFDC13Q8IUB5 93 aa5.58□□□□□ -1.52
GM2A-201ENST00000357164 PLA2G2DQ9UNK4 145 aa5.58□□□□□ -1.52
GM2A-201ENST00000357164 TENM2Q9NT68 2774 aa5.58□□□□□ -1.52
GM2A-201ENST00000357164 ZNF73O43830 326 aaPredicted RBP5.58□□□□□ -1.52
GM2A-201ENST00000357164 SPRR4Q96PI1 79 aa5.58□□□□□ -1.52
GM2A-201ENST00000357164 C6orf48Q9UBA6 75 aa5.58□□□□□ -1.52
GM2A-201ENST00000357164 CD164Q04900 197 aa5.57□□□□□ -1.52
GM2A-201ENST00000357164 WFDC10BQ8IUB3 73 aa5.57□□□□□ -1.52
GM2A-201ENST00000357164 NKAPP1Q8N9T2 125 aa5.57□□□□□ -1.52
GM2A-201ENST00000357164 SYCNQ0VAF6 134 aa5.57□□□□□ -1.52
GM2A-201ENST00000357164 LINC00588Q9Y4M8 146 aa5.57□□□□□ -1.52
GM2A-201ENST00000357164 UBE2BP63146 152 aa5.57□□□□□ -1.52
GM2A-201ENST00000357164 DIRC1Q969H9 104 aa5.57□□□□□ -1.52
GM2A-201ENST00000357164 PLAC8Q9NZF1 115 aa5.56□□□□□ -1.52
GM2A-201ENST00000357164 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.56□□□□□ -1.52
GM2A-201ENST00000357164 KRTAP10-9P60411 292 aa5.56□□□□□ -1.52
GM2A-201ENST00000357164 SMIM29Q86T20 159 aa5.56□□□□□ -1.52
GM2A-201ENST00000357164 CYSRT1A8MQ03 144 aa5.56□□□□□ -1.52
GM2A-201ENST00000357164 Q8N377 158 aa5.55□□□□□ -1.52
GM2A-201ENST00000357164 X6R8D5 127 aa5.55□□□□□ -1.52
GM2A-201ENST00000357164 A0A1W2PNM2 257 aa5.55□□□□□ -1.52
GM2A-201ENST00000357164 DNAJC9-AS1A6NH13 148 aa5.54□□□□□ -1.52
GM2A-201ENST00000357164 DSCR9P59020 149 aa5.54□□□□□ -1.52
GM2A-201ENST00000357164 A0A0G2JQZ4 141 aa5.54□□□□□ -1.52
GM2A-201ENST00000357164 A0A1W2PNN7 141 aa5.54□□□□□ -1.52
GM2A-201ENST00000357164 STAB1Q9NY15 2570 aa5.53□□□□□ -1.52
GM2A-201ENST00000357164 A6NN06 94 aa5.53□□□□□ -1.52
GM2A-201ENST00000357164 IGLV1-51P01701 117 aa5.53□□□□□ -1.52
GM2A-201ENST00000357164 IGKV2-24A0A0C4DH68 120 aa5.53□□□□□ -1.52
GM2A-201ENST00000357164 KCNQ1DNQ9H478 68 aa5.52□□□□□ -1.53
GM2A-201ENST00000357164 PRO0255Q9UI72 69 aa5.52□□□□□ -1.53
GM2A-201ENST00000357164 ST20-AS1Q8NBB2 130 aa5.52□□□□□ -1.53
GM2A-201ENST00000357164 RETNQ9HD89 108 aa5.52□□□□□ -1.53
GM2A-201ENST00000357164 KRTAP29-1A8MX34 341 aaPredicted RBP5.52□□□□□ -1.53
GM2A-201ENST00000357164 ITPR2Q14571 2701 aa5.52□□□□□ -1.53
GM2A-201ENST00000357164 C16orf90A8MZG2 172 aa5.51□□□□□ -1.53
GM2A-201ENST00000357164 NDUFS5O43920 106 aa5.51□□□□□ -1.53
GM2A-201ENST00000357164 PHF5AQ7RTV0 110 aaKnown RBP5.51□□□□□ -1.53
GM2A-201ENST00000357164 Q8N9P0 234 aaPredicted RBP5.51□□□□□ -1.53
GM2A-201ENST00000357164 IGSF10Q6WRI0 2623 aa5.51□□□□□ -1.53
GM2A-201ENST00000357164 LOC101927531A0A1B0GV80 90 aa5.51□□□□□ -1.53
GM2A-201ENST00000357164 M0R378 163 aa5.51□□□□□ -1.53
GM2A-201ENST00000357164 SPRR1AP35321 89 aa5.51□□□□□ -1.53
GM2A-201ENST00000357164 LCA10Q71F78 164 aa5.51□□□□□ -1.53
GM2A-201ENST00000357164 Q9BRP9 147 aa5.51□□□□□ -1.53
GM2A-201ENST00000357164 DNAH9Q9NYC9 4486 aa5.5□□□□□ -1.53
GM2A-201ENST00000357164 C9orf163Q8N9P6 203 aa5.5□□□□□ -1.53
GM2A-201ENST00000357164 SPANXA2-OT1Q8N9U9 137 aa5.5□□□□□ -1.53
GM2A-201ENST00000357164 ETDCA0A1B0GVM5 59 aa5.5□□□□□ -1.53
GM2A-201ENST00000357164 SMR3AQ99954 134 aa5.5□□□□□ -1.53
GM2A-201ENST00000357164 DNAH10Q8IVF4 4471 aa5.5□□□□□ -1.53
GM2A-201ENST00000357164 KPRPQ5T749 579 aaPredicted RBP5.49□□□□□ -1.53
GM2A-201ENST00000357164 CMC4P56277 68 aaPredicted RBP5.48□□□□□ -1.53
GM2A-201ENST00000357164 KRTAP7-1Q8IUC3 87 aa5.48□□□□□ -1.53
GM2A-201ENST00000357164 CHKB-CPT1BH3BT56 60 aa5.48□□□□□ -1.53
GM2A-201ENST00000357164 KTN1-AS1Q86SY8 53 aa5.48□□□□□ -1.53
GM2A-201ENST00000357164 A8MUN3 132 aa5.48□□□□□ -1.53
GM2A-201ENST00000357164 Q75L30 129 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms