RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 UQCR11O14957 56 aa3.68□□□□□ -1.82
PTPRD-202ENST00000356435 C8orf17Q9NRJ1 99 aa3.68□□□□□ -1.82
PTPRD-202ENST00000356435 A0A1B0GVX0 72 aa3.68□□□□□ -1.82
PTPRD-202ENST00000356435 K7EQZ3 153 aa3.67□□□□□ -1.82
PTPRD-202ENST00000356435 LINC00528Q8N1L1 170 aa3.67□□□□□ -1.82
PTPRD-202ENST00000356435 FAM104AQ969W3 186 aa3.67□□□□□ -1.82
PTPRD-202ENST00000356435 IGFL1Q6UW32 110 aa3.67□□□□□ -1.82
PTPRD-202ENST00000356435 POLQO75417 2590 aa3.66□□□□□ -1.82
PTPRD-202ENST00000356435 SMR3BP02814 79 aaPredicted RBP3.66□□□□□ -1.82
PTPRD-202ENST00000356435 C19orf73Q9NVV2 129 aa3.66□□□□□ -1.82
PTPRD-202ENST00000356435 WDR87Q6ZQQ6 2873 aa3.66□□□□□ -1.82
PTPRD-202ENST00000356435 IGLV7-43P04211 117 aa3.66□□□□□ -1.82
PTPRD-202ENST00000356435 C9orf163Q8N9P6 203 aa3.66□□□□□ -1.82
PTPRD-202ENST00000356435 CHD9Q3L8U1 2897 aa3.65□□□□□ -1.82
PTPRD-202ENST00000356435 PRR15Q8IV56 129 aa3.65□□□□□ -1.83
PTPRD-202ENST00000356435 CYP4F30PQ9H0H9 118 aa3.65□□□□□ -1.83
PTPRD-202ENST00000356435 MIR22HGQ0VDD5 57 aa3.65□□□□□ -1.83
PTPRD-202ENST00000356435 C15orf56Q8N910 161 aa3.64□□□□□ -1.83
PTPRD-202ENST00000356435 LINC01554Q52M75 96 aa3.64□□□□□ -1.83
PTPRD-202ENST00000356435 CSNK1G2-AS1Q8NCQ2 148 aa3.64□□□□□ -1.83
PTPRD-202ENST00000356435 COL27A1Q8IZC6 1860 aaPredicted RBP3.64□□□□□ -1.83
PTPRD-202ENST00000356435 FLNBO75369 2602 aaKnown RBP3.64□□□□□ -1.83
PTPRD-202ENST00000356435 Q5XG85 94 aa3.64□□□□□ -1.83
PTPRD-202ENST00000356435 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
PTPRD-202ENST00000356435 H7BZZ5 65 aa3.64□□□□□ -1.83
PTPRD-202ENST00000356435 Q6ZSA8 131 aa3.64□□□□□ -1.83
PTPRD-202ENST00000356435 TLX1NBP0CAT3 122 aa3.63□□□□□ -1.83
PTPRD-202ENST00000356435 PLA2G2DQ9UNK4 145 aa3.63□□□□□ -1.83
PTPRD-202ENST00000356435 SPTBN4Q9H254 2564 aa3.63□□□□□ -1.83
PTPRD-202ENST00000356435 LINC00483Q53H64 154 aa3.63□□□□□ -1.83
PTPRD-202ENST00000356435 M0R2T5 61 aa3.62□□□□□ -1.83
PTPRD-202ENST00000356435 C9orf129Q5T035 196 aaKnown RBP3.62□□□□□ -1.83
PTPRD-202ENST00000356435 PRR34Q9NV39 138 aa3.62□□□□□ -1.83
PTPRD-202ENST00000356435 CNBPP62633 177 aaKnown RBP3.62□□□□□ -1.83
PTPRD-202ENST00000356435 SPRR4Q96PI1 79 aa3.62□□□□□ -1.83
PTPRD-202ENST00000356435 EPG5Q9HCE0 2579 aa3.62□□□□□ -1.83
PTPRD-202ENST00000356435 TRANK1O15050 2925 aa3.61□□□□□ -1.83
PTPRD-202ENST00000356435 PSORS1C2Q9UIG4 136 aa3.61□□□□□ -1.83
PTPRD-202ENST00000356435 IGLV5-48A0A075B6I7 105 aa3.6□□□□□ -1.83
PTPRD-202ENST00000356435 A0A0D9SG42 100 aa3.6□□□□□ -1.83
PTPRD-202ENST00000356435 LINC00612Q8N6U2 182 aa3.6□□□□□ -1.83
PTPRD-202ENST00000356435 ACANP16112 2415 aa3.6□□□□□ -1.83
PTPRD-202ENST00000356435 IGLV7-46A0A075B6I9 117 aa3.59□□□□□ -1.84
PTPRD-202ENST00000356435 ANAPC11Q9NYG5 84 aa3.58□□□□□ -1.84
PTPRD-202ENST00000356435 KRTAP10-3P60369 221 aa3.58□□□□□ -1.84
PTPRD-202ENST00000356435 CAMK2N1Q7Z7J9 78 aa3.58□□□□□ -1.84
PTPRD-202ENST00000356435 Q8N1X5 172 aa3.58□□□□□ -1.84
PTPRD-202ENST00000356435 A8MUN3 132 aa3.58□□□□□ -1.84
PTPRD-202ENST00000356435 ANKRD17O75179 2603 aaKnown RBP3.56□□□□□ -1.84
PTPRD-202ENST00000356435 A0A096LNT2 108 aa3.56□□□□□ -1.84
PTPRD-202ENST00000356435 HRES1P13985 223 aa3.56□□□□□ -1.84
PTPRD-202ENST00000356435 CASC10Q5T4H9 136 aa3.56□□□□□ -1.84
PTPRD-202ENST00000356435 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
PTPRD-202ENST00000356435 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
PTPRD-202ENST00000356435 Q8N377 158 aa3.56□□□□□ -1.84
PTPRD-202ENST00000356435 OXTP01178 125 aa3.56□□□□□ -1.84
PTPRD-202ENST00000356435 A0A1W2PNN7 141 aa3.56□□□□□ -1.84
PTPRD-202ENST00000356435 PRR26Q8N8Z3 221 aa3.55□□□□□ -1.84
PTPRD-202ENST00000356435 CYSTM1Q9H1C7 97 aa3.55□□□□□ -1.84
PTPRD-202ENST00000356435 MGAM2Q2M2H8 2515 aa3.55□□□□□ -1.84
PTPRD-202ENST00000356435 ASB16-AS1Q495Z4 193 aa3.55□□□□□ -1.84
PTPRD-202ENST00000356435 SPANXA2-OT1Q8N9U9 137 aa3.54□□□□□ -1.84
PTPRD-202ENST00000356435 FAM229BQ4G0N7 80 aa3.54□□□□□ -1.84
PTPRD-202ENST00000356435 GIG44P09565 113 aaPredicted RBP3.54□□□□□ -1.84
PTPRD-202ENST00000356435 A0A0G2JQZ4 141 aa3.54□□□□□ -1.84
PTPRD-202ENST00000356435 FP248Q71RG6 208 aaPredicted RBP3.54□□□□□ -1.84
PTPRD-202ENST00000356435 CHD7Q9P2D1 2997 aa3.53□□□□□ -1.84
PTPRD-202ENST00000356435 Q1T7F1 81 aa3.53□□□□□ -1.85
PTPRD-202ENST00000356435 S4R3F8 94 aa3.52□□□□□ -1.85
PTPRD-202ENST00000356435 TNP2Q05952 138 aa3.52□□□□□ -1.85
PTPRD-202ENST00000356435 SRCAPQ6ZRS2 3230 aa3.51□□□□□ -1.85
PTPRD-202ENST00000356435 MAST4O15021 2626 aa3.51□□□□□ -1.85
PTPRD-202ENST00000356435 OCR1Q9BZK8 76 aa3.51□□□□□ -1.85
PTPRD-202ENST00000356435 CSAG1Q6PB30 78 aa3.51□□□□□ -1.85
PTPRD-202ENST00000356435 HTTP42858 3142 aa3.5□□□□□ -1.85
PTPRD-202ENST00000356435 SEC61BP60468 96 aaKnown RBP3.5□□□□□ -1.85
PTPRD-202ENST00000356435 PRRC2CQ9Y520 2896 aaKnown RBP3.5□□□□□ -1.85
PTPRD-202ENST00000356435 A0A087X002 238 aa3.49□□□□□ -1.85
PTPRD-202ENST00000356435 HECTD1Q9ULT8 2610 aa3.49□□□□□ -1.85
PTPRD-202ENST00000356435 A0A1W2PNM2 257 aa3.49□□□□□ -1.85
PTPRD-202ENST00000356435 CENPFP49454 3210 aa3.49□□□□□ -1.85
PTPRD-202ENST00000356435 LCA10Q71F78 164 aa3.49□□□□□ -1.85
PTPRD-202ENST00000356435 ZCCHC13Q8WW36 166 aaKnown RBP3.49□□□□□ -1.85
PTPRD-202ENST00000356435 ATRQ13535 2644 aa3.48□□□□□ -1.85
PTPRD-202ENST00000356435 A0A1B0GU33 70 aa3.48□□□□□ -1.85
PTPRD-202ENST00000356435 KRTAP1-1Q07627 177 aa3.48□□□□□ -1.85
PTPRD-202ENST00000356435 USP24Q9UPU5 2620 aa3.48□□□□□ -1.85
PTPRD-202ENST00000356435 KRTAP1-3Q8IUG1 177 aa3.48□□□□□ -1.85
PTPRD-202ENST00000356435 A0A0C4DFX4 3053 aa3.47□□□□□ -1.85
PTPRD-202ENST00000356435 DNAH12Q6ZR08 3092 aa3.47□□□□□ -1.85
PTPRD-202ENST00000356435 LCE6AA0A183 80 aa3.47□□□□□ -1.85
PTPRD-202ENST00000356435 Q5VSD8 79 aa3.47□□□□□ -1.85
PTPRD-202ENST00000356435 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.47□□□□□ -1.85
PTPRD-202ENST00000356435 STAB1Q9NY15 2570 aa3.47□□□□□ -1.85
PTPRD-202ENST00000356435 PLAC8Q9NZF1 115 aa3.47□□□□□ -1.85
PTPRD-202ENST00000356435 H3BS24 57 aa3.46□□□□□ -1.86
PTPRD-202ENST00000356435 CEP350Q5VT06 3117 aa3.46□□□□□ -1.86
PTPRD-202ENST00000356435 DMAC1Q96GE9 116 aa3.45□□□□□ -1.86
PTPRD-202ENST00000356435 R4GN34 69 aa3.44□□□□□ -1.86
PTPRD-202ENST00000356435 CR1P17927 2039 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms