RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 CENPEQ02224 2701 aa6.82□□□□□ -1.32
CHRNA1-202ENST00000348749 M0R378 163 aa6.82□□□□□ -1.32
CHRNA1-202ENST00000348749 XAGE1AQ9HD64 81 aa6.82□□□□□ -1.32
CHRNA1-202ENST00000348749 SONP18583 2426 aaKnown RBP6.81□□□□□ -1.32
CHRNA1-202ENST00000348749 CSMD2Q7Z408 3487 aa6.81□□□□□ -1.32
CHRNA1-202ENST00000348749 C3orf84H3BNL1 204 aa6.81□□□□□ -1.32
CHRNA1-202ENST00000348749 SPART-AS1P0CW21 52 aa6.81□□□□□ -1.32
CHRNA1-202ENST00000348749 F8P00451 2351 aa6.81□□□□□ -1.32
CHRNA1-202ENST00000348749 IGLV5-48A0A075B6I7 105 aa6.8□□□□□ -1.32
CHRNA1-202ENST00000348749 TRAV22A0A0B4J277 110 aa6.8□□□□□ -1.32
CHRNA1-202ENST00000348749 Q8NAQ8 132 aa6.8□□□□□ -1.32
CHRNA1-202ENST00000348749 APCP25054 2843 aa6.79□□□□□ -1.32
CHRNA1-202ENST00000348749 ETDCA0A1B0GVM5 59 aa6.79□□□□□ -1.32
CHRNA1-202ENST00000348749 LRCOL1A6NCL2 159 aa6.79□□□□□ -1.32
CHRNA1-202ENST00000348749 EGFEM1PQ0D2K5 195 aa6.79□□□□□ -1.32
CHRNA1-202ENST00000348749 CD164Q04900 197 aa6.78□□□□□ -1.32
CHRNA1-202ENST00000348749 DEFB135Q30KP9 77 aa6.78□□□□□ -1.32
CHRNA1-202ENST00000348749 SETD2Q9BYW2 2564 aaPredicted RBP6.78□□□□□ -1.32
CHRNA1-202ENST00000348749 KRTAP10-3P60369 221 aa6.78□□□□□ -1.32
CHRNA1-202ENST00000348749 NF1P21359 2839 aa6.77□□□□□ -1.32
CHRNA1-202ENST00000348749 FLNAP21333 2647 aaKnown RBP6.77□□□□□ -1.33
CHRNA1-202ENST00000348749 H3BNG1 76 aa6.77□□□□□ -1.33
CHRNA1-202ENST00000348749 PSPHP1O15172 72 aa6.77□□□□□ -1.33
CHRNA1-202ENST00000348749 PSCAO43653 123 aa6.77□□□□□ -1.33
CHRNA1-202ENST00000348749 KPRPQ5T749 579 aaPredicted RBP6.77□□□□□ -1.33
CHRNA1-202ENST00000348749 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.77□□□□□ -1.33
CHRNA1-202ENST00000348749 FBN3Q75N90 2809 aa6.76□□□□□ -1.33
CHRNA1-202ENST00000348749 Q8N377 158 aa6.76□□□□□ -1.33
CHRNA1-202ENST00000348749 NDUFB1O75438 58 aa6.75□□□□□ -1.33
CHRNA1-202ENST00000348749 HIVEP1P15822 2718 aa6.75□□□□□ -1.33
CHRNA1-202ENST00000348749 FN1P02751 2386 aaKnown RBP6.75□□□□□ -1.33
CHRNA1-202ENST00000348749 A0A1W2PNM2 257 aa6.74□□□□□ -1.33
CHRNA1-202ENST00000348749 CAMK2N2Q96S95 79 aa6.74□□□□□ -1.33
CHRNA1-202ENST00000348749 PDZD2O15018 2839 aa6.74□□□□□ -1.33
CHRNA1-202ENST00000348749 DEFB4AO15263 64 aa6.73□□□□□ -1.33
CHRNA1-202ENST00000348749 DSCR10P59022 87 aa6.73□□□□□ -1.33
CHRNA1-202ENST00000348749 SYCNQ0VAF6 134 aa6.73□□□□□ -1.33
CHRNA1-202ENST00000348749 CCDC168Q8NDH2 2452 aa6.73□□□□□ -1.33
CHRNA1-202ENST00000348749 A8MUN3 132 aa6.73□□□□□ -1.33
CHRNA1-202ENST00000348749 TNP2Q05952 138 aa6.73□□□□□ -1.33
CHRNA1-202ENST00000348749 SPRR4Q96PI1 79 aa6.73□□□□□ -1.33
CHRNA1-202ENST00000348749 ANK3Q12955 4377 aaKnown RBP6.72□□□□□ -1.33
CHRNA1-202ENST00000348749 UBE2BP63146 152 aa6.72□□□□□ -1.33
CHRNA1-202ENST00000348749 Q5VV11 94 aa6.72□□□□□ -1.33
CHRNA1-202ENST00000348749 KRTAP26-1Q6PEX3 210 aa6.72□□□□□ -1.33
CHRNA1-202ENST00000348749 Q8NBF4 154 aa6.72□□□□□ -1.33
CHRNA1-202ENST00000348749 KCNQ1DNQ9H478 68 aa6.72□□□□□ -1.33
CHRNA1-202ENST00000348749 NIPBLQ6KC79 2804 aaeCLIP6.72□□□□□ -1.33
CHRNA1-202ENST00000348749 ZNF469Q96JG9 3925 aaPredicted RBP6.71□□□□□ -1.33
CHRNA1-202ENST00000348749 HTN3P15516 51 aa6.71□□□□□ -1.34
CHRNA1-202ENST00000348749 ST20-AS1Q8NBB2 130 aa6.71□□□□□ -1.34
CHRNA1-202ENST00000348749 HCG22E2RYF7 251 aa6.7□□□□□ -1.34
CHRNA1-202ENST00000348749 K7EQZ3 153 aa6.7□□□□□ -1.34
CHRNA1-202ENST00000348749 C1orf137Q5JT78 98 aa6.7□□□□□ -1.34
CHRNA1-202ENST00000348749 DEFB105AQ8NG35 78 aa6.7□□□□□ -1.34
CHRNA1-202ENST00000348749 UBE2AP49459 152 aa6.69□□□□□ -1.34
CHRNA1-202ENST00000348749 DHRS4-AS1Q9P1J3 65 aa6.69□□□□□ -1.34
CHRNA1-202ENST00000348749 B9D2Q9BPU9 175 aa6.69□□□□□ -1.34
CHRNA1-202ENST00000348749 DNHD1Q96M86 4753 aa6.69□□□□□ -1.34
CHRNA1-202ENST00000348749 MTORP42345 2549 aa6.69□□□□□ -1.34
CHRNA1-202ENST00000348749 C15orf56Q8N910 161 aa6.68□□□□□ -1.34
CHRNA1-202ENST00000348749 SPANXA2-OT1Q8N9U9 137 aa6.68□□□□□ -1.34
CHRNA1-202ENST00000348749 LIMD2Q9BT23 127 aa6.68□□□□□ -1.34
CHRNA1-202ENST00000348749 PRR4Q16378 134 aa6.68□□□□□ -1.34
CHRNA1-202ENST00000348749 KTN1-AS1Q86SY8 53 aa6.68□□□□□ -1.34
CHRNA1-202ENST00000348749 PLA2G2DQ9UNK4 145 aa6.68□□□□□ -1.34
CHRNA1-202ENST00000348749 LINC00588Q9Y4M8 146 aa6.68□□□□□ -1.34
CHRNA1-202ENST00000348749 Q9BRP9 147 aa6.66□□□□□ -1.34
CHRNA1-202ENST00000348749 A8MU10 97 aa6.66□□□□□ -1.34
CHRNA1-202ENST00000348749 TLX1NBP0CAT3 122 aa6.66□□□□□ -1.34
CHRNA1-202ENST00000348749 MP68P56378 58 aa6.66□□□□□ -1.34
CHRNA1-202ENST00000348749 Q6ZRX8 168 aa6.66□□□□□ -1.34
CHRNA1-202ENST00000348749 MRPL55Q7Z7F7 128 aaKnown RBP6.66□□□□□ -1.34
CHRNA1-202ENST00000348749 Q8N9P0 234 aaPredicted RBP6.66□□□□□ -1.34
CHRNA1-202ENST00000348749 LINC01556Q5JQF7 62 aa6.65□□□□□ -1.34
CHRNA1-202ENST00000348749 WFDC10BQ8IUB3 73 aa6.65□□□□□ -1.34
CHRNA1-202ENST00000348749 NKAPP1Q8N9T2 125 aa6.65□□□□□ -1.34
CHRNA1-202ENST00000348749 C16orf90A8MZG2 172 aa6.64□□□□□ -1.35
CHRNA1-202ENST00000348749 KRTAP4-16G5E9R7 235 aaPredicted RBP6.64□□□□□ -1.35
CHRNA1-202ENST00000348749 H3BPC8 53 aa6.64□□□□□ -1.35
CHRNA1-202ENST00000348749 C7orf33Q8WU49 177 aa6.64□□□□□ -1.35
CHRNA1-202ENST00000348749 ACANP16112 2415 aa6.64□□□□□ -1.35
CHRNA1-202ENST00000348749 HIVEP2P31629 2446 aa6.64□□□□□ -1.35
CHRNA1-202ENST00000348749 IGLV5-37A0A075B6J1 123 aa6.64□□□□□ -1.35
CHRNA1-202ENST00000348749 CHKB-CPT1BH3BT56 60 aa6.64□□□□□ -1.35
CHRNA1-202ENST00000348749 RETNQ9HD89 108 aa6.64□□□□□ -1.35
CHRNA1-202ENST00000348749 LINC00208Q96KT6 92 aa6.63□□□□□ -1.35
CHRNA1-202ENST00000348749 NBEAL2Q6ZNJ1 2754 aa6.63□□□□□ -1.35
CHRNA1-202ENST00000348749 SPRR1AP35321 89 aa6.62□□□□□ -1.35
CHRNA1-202ENST00000348749 ATP11AUNQ6ZP68 121 aa6.62□□□□□ -1.35
CHRNA1-202ENST00000348749 SERTAD4-AS1Q5TG53 156 aa6.62□□□□□ -1.35
CHRNA1-202ENST00000348749 Q75L30 129 aa6.62□□□□□ -1.35
CHRNA1-202ENST00000348749 NDUFS5O43920 106 aa6.61□□□□□ -1.35
CHRNA1-202ENST00000348749 RBM12B-AS1Q9P1G2 102 aa6.61□□□□□ -1.35
CHRNA1-202ENST00000348749 LOC101927531A0A1B0GV80 90 aa6.6□□□□□ -1.35
CHRNA1-202ENST00000348749 PHF5AQ7RTV0 110 aaKnown RBP6.6□□□□□ -1.35
CHRNA1-202ENST00000348749 PRR15LQ9BU68 103 aa6.6□□□□□ -1.35
CHRNA1-202ENST00000348749 CUBNO60494 3623 aa6.59□□□□□ -1.35
CHRNA1-202ENST00000348749 KRTAP29-1A8MX34 341 aaPredicted RBP6.59□□□□□ -1.35
CHRNA1-202ENST00000348749 PRB2P02812 416 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms