RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 IGKV2-30P06310 120 aa7.36□□□□□ -1.23
CLCN6-202ENST00000346436 LINC00304Q8N9R0 145 aa7.35□□□□□ -1.23
CLCN6-202ENST00000346436 A0A096LNT2 108 aa7.35□□□□□ -1.23
CLCN6-202ENST00000346436 LINC01547P58512 204 aaPredicted RBP7.35□□□□□ -1.23
CLCN6-202ENST00000346436 FAM30AQ9NZY2 134 aa7.35□□□□□ -1.23
CLCN6-202ENST00000346436 A0A087WTM6 91 aa7.35□□□□□ -1.23
CLCN6-202ENST00000346436 BRK1Q8WUW1 75 aa7.35□□□□□ -1.23
CLCN6-202ENST00000346436 DCHS1Q96JQ0 3298 aa7.34□□□□□ -1.23
CLCN6-202ENST00000346436 TRBV7-6A0A0J9YX20 115 aa7.34□□□□□ -1.23
CLCN6-202ENST00000346436 SPINK1P00995 79 aa7.34□□□□□ -1.23
CLCN6-202ENST00000346436 FLNAP21333 2647 aaKnown RBP7.33□□□□□ -1.24
CLCN6-202ENST00000346436 LINC00208Q96KT6 92 aa7.33□□□□□ -1.24
CLCN6-202ENST00000346436 C6orf48Q9UBA6 75 aa7.33□□□□□ -1.24
CLCN6-202ENST00000346436 HCG22E2RYF7 251 aa7.32□□□□□ -1.24
CLCN6-202ENST00000346436 LINC00476Q8WZB0 136 aa7.32□□□□□ -1.24
CLCN6-202ENST00000346436 GIG44P09565 113 aaPredicted RBP7.32□□□□□ -1.24
CLCN6-202ENST00000346436 CHTF8P0CG12 524 aa7.31□□□□□ -1.24
CLCN6-202ENST00000346436 LINC00313P59037 77 aa7.31□□□□□ -1.24
CLCN6-202ENST00000346436 HECTD1Q9ULT8 2610 aa7.31□□□□□ -1.24
CLCN6-202ENST00000346436 SMR3BP02814 79 aaPredicted RBP7.31□□□□□ -1.24
CLCN6-202ENST00000346436 MUC3AQ02505 3323 aa7.3□□□□□ -1.24
CLCN6-202ENST00000346436 TP53AIP1Q9HCN2 124 aa7.3□□□□□ -1.24
CLCN6-202ENST00000346436 ZZEF1O43149 2961 aa7.3□□□□□ -1.24
CLCN6-202ENST00000346436 VPREB1P12018 145 aa7.3□□□□□ -1.24
CLCN6-202ENST00000346436 A0A1B0GW54 56 aa7.3□□□□□ -1.24
CLCN6-202ENST00000346436 LINC00528Q8N1L1 170 aa7.3□□□□□ -1.24
CLCN6-202ENST00000346436 C9orf129Q5T035 196 aaKnown RBP7.29□□□□□ -1.24
CLCN6-202ENST00000346436 FAM104AQ969W3 186 aa7.29□□□□□ -1.24
CLCN6-202ENST00000346436 CSNK1G2-AS1Q8NCQ2 148 aa7.29□□□□□ -1.24
CLCN6-202ENST00000346436 TRAV7A0A075B6U4 112 aa7.29□□□□□ -1.24
CLCN6-202ENST00000346436 DEFB116Q30KQ4 102 aa7.29□□□□□ -1.24
CLCN6-202ENST00000346436 A0A0U1RQV1 116 aa7.28□□□□□ -1.24
CLCN6-202ENST00000346436 C7orf65Q6ZTY9 151 aa7.28□□□□□ -1.24
CLCN6-202ENST00000346436 C8orf87E5RJ46 101 aa7.28□□□□□ -1.24
CLCN6-202ENST00000346436 ITPR3Q14573 2671 aa7.28□□□□□ -1.24
CLCN6-202ENST00000346436 APLNQ9ULZ1 77 aa7.28□□□□□ -1.24
CLCN6-202ENST00000346436 SSBP3-AS1Q7Z2R9 100 aa7.28□□□□□ -1.24
CLCN6-202ENST00000346436 Q96NJ1 140 aa7.27□□□□□ -1.25
CLCN6-202ENST00000346436 COL12A1Q99715 3063 aa7.27□□□□□ -1.25
CLCN6-202ENST00000346436 LAMA5O15230 3695 aa7.27□□□□□ -1.25
CLCN6-202ENST00000346436 CASC10Q5T4H9 136 aa7.27□□□□□ -1.25
CLCN6-202ENST00000346436 H0Y9P7 68 aa7.26□□□□□ -1.25
CLCN6-202ENST00000346436 Q6ZRX8 168 aa7.26□□□□□ -1.25
CLCN6-202ENST00000346436 RBM12B-AS1Q9P1G2 102 aa7.26□□□□□ -1.25
CLCN6-202ENST00000346436 KIAA0087Q14695 138 aa7.25□□□□□ -1.25
CLCN6-202ENST00000346436 KRTAP1-3Q8IUG1 177 aa7.24□□□□□ -1.25
CLCN6-202ENST00000346436 ZNF861PO60384 105 aa7.24□□□□□ -1.25
CLCN6-202ENST00000346436 PCOTHQ58A44 107 aa7.24□□□□□ -1.25
CLCN6-202ENST00000346436 KRTAP10-3P60369 221 aa7.23□□□□□ -1.25
CLCN6-202ENST00000346436 CFAP46Q8IYW2 2715 aa7.23□□□□□ -1.25
CLCN6-202ENST00000346436 A6NED7 52 aa7.23□□□□□ -1.25
CLCN6-202ENST00000346436 Q6ZQT0 140 aa7.23□□□□□ -1.25
CLCN6-202ENST00000346436 C9orf163Q8N9P6 203 aa7.23□□□□□ -1.25
CLCN6-202ENST00000346436 CHD6Q8TD26 2715 aa7.22□□□□□ -1.25
CLCN6-202ENST00000346436 KRTAP1-1Q07627 177 aa7.22□□□□□ -1.25
CLCN6-202ENST00000346436 ELOF1P60002 83 aaKnown RBP7.2□□□□□ -1.26
CLCN6-202ENST00000346436 RELNP78509 3460 aa7.2□□□□□ -1.26
CLCN6-202ENST00000346436 ST20-AS1Q8NBB2 130 aa7.19□□□□□ -1.26
CLCN6-202ENST00000346436 TMEM254Q8TBM7 123 aa7.19□□□□□ -1.26
CLCN6-202ENST00000346436 PSORS1C2Q9UIG4 136 aa7.19□□□□□ -1.26
CLCN6-202ENST00000346436 MGAM2Q2M2H8 2515 aa7.18□□□□□ -1.26
CLCN6-202ENST00000346436 USP24Q9UPU5 2620 aa7.18□□□□□ -1.26
CLCN6-202ENST00000346436 IGLV7-43P04211 117 aa7.17□□□□□ -1.26
CLCN6-202ENST00000346436 CXCL6P80162 114 aa7.17□□□□□ -1.26
CLCN6-202ENST00000346436 C4orf26Q17RF5 130 aa7.17□□□□□ -1.26
CLCN6-202ENST00000346436 ATRQ13535 2644 aa7.17□□□□□ -1.26
CLCN6-202ENST00000346436 SMIM29Q86T20 159 aa7.16□□□□□ -1.26
CLCN6-202ENST00000346436 SMG1Q96Q15 3661 aaKnown RBP7.16□□□□□ -1.26
CLCN6-202ENST00000346436 C1orf64Q8NEQ6 169 aa7.16□□□□□ -1.26
CLCN6-202ENST00000346436 SMIM26A0A096LP01 95 aa7.16□□□□□ -1.26
CLCN6-202ENST00000346436 ACYP2P14621 99 aa7.15□□□□□ -1.26
CLCN6-202ENST00000346436 TEX15Q9BXT5 2789 aa7.15□□□□□ -1.26
CLCN6-202ENST00000346436 FAM168BA1KXE4 195 aa7.15□□□□□ -1.26
CLCN6-202ENST00000346436 IGLV6-57P01721 117 aa7.15□□□□□ -1.26
CLCN6-202ENST00000346436 GCN1Q92616 2671 aaKnown RBP7.15□□□□□ -1.27
CLCN6-202ENST00000346436 IGLV1-50A0A075B6I6 118 aa7.15□□□□□ -1.27
CLCN6-202ENST00000346436 FLNCQ14315 2725 aa7.14□□□□□ -1.27
CLCN6-202ENST00000346436 NBEAL2Q6ZNJ1 2754 aa7.14□□□□□ -1.27
CLCN6-202ENST00000346436 LOC110117498A0A087WWA1 95 aa7.14□□□□□ -1.27
CLCN6-202ENST00000346436 IGSF10Q6WRI0 2623 aa7.13□□□□□ -1.27
CLCN6-202ENST00000346436 IGLV5-37A0A075B6J1 123 aa7.13□□□□□ -1.27
CLCN6-202ENST00000346436 LCE6AA0A183 80 aa7.13□□□□□ -1.27
CLCN6-202ENST00000346436 ITPR1Q14643 2758 aa7.13□□□□□ -1.27
CLCN6-202ENST00000346436 M0R2T5 61 aa7.12□□□□□ -1.27
CLCN6-202ENST00000346436 CSMD1Q96PZ7 3565 aa7.12□□□□□ -1.27
CLCN6-202ENST00000346436 HELZ2Q9BYK8 2649 aaKnown RBP7.12□□□□□ -1.27
CLCN6-202ENST00000346436 CNBPP62633 177 aaKnown RBP7.12□□□□□ -1.27
CLCN6-202ENST00000346436 SERTAD4-AS1Q5TG53 156 aa7.12□□□□□ -1.27
CLCN6-202ENST00000346436 LINC00612Q8N6U2 182 aa7.11□□□□□ -1.27
CLCN6-202ENST00000346436 PRR34Q9NV39 138 aa7.11□□□□□ -1.27
CLCN6-202ENST00000346436 CR1P17927 2039 aa7.11□□□□□ -1.27
CLCN6-202ENST00000346436 Q6ZSA8 131 aa7.11□□□□□ -1.27
CLCN6-202ENST00000346436 TNP2Q05952 138 aa7.11□□□□□ -1.27
CLCN6-202ENST00000346436 H3BPC8 53 aa7.1□□□□□ -1.27
CLCN6-202ENST00000346436 PSPHP1O15172 72 aa7.1□□□□□ -1.27
CLCN6-202ENST00000346436 TRAV22A0A0B4J277 110 aa7.1□□□□□ -1.27
CLCN6-202ENST00000346436 TLX1NBP0CAT3 122 aa7.09□□□□□ -1.27
CLCN6-202ENST00000346436 HRNRQ86YZ3 2850 aaPredicted RBP7.09□□□□□ -1.28
CLCN6-202ENST00000346436 LOC101927531A0A1B0GV80 90 aa7.09□□□□□ -1.28
CLCN6-202ENST00000346436 C9orf92A6NGG3 77 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms