RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SPTSSBQ8NFR3 76 aa4.81□□□□□ -1.64
VCAN-202ENST00000342785 LY6G6CO95867 125 aa4.81□□□□□ -1.64
VCAN-202ENST00000342785 Q8NBF4 154 aa4.81□□□□□ -1.64
VCAN-202ENST00000342785 LINC00588Q9Y4M8 146 aa4.81□□□□□ -1.64
VCAN-202ENST00000342785 C9orf129Q5T035 196 aaKnown RBP4.81□□□□□ -1.64
VCAN-202ENST00000342785 HCG22E2RYF7 251 aa4.8□□□□□ -1.64
VCAN-202ENST00000342785 ST20-AS1Q8NBB2 130 aa4.8□□□□□ -1.64
VCAN-202ENST00000342785 V9GYY9 64 aa4.8□□□□□ -1.64
VCAN-202ENST00000342785 LINC00528Q8N1L1 170 aa4.8□□□□□ -1.64
VCAN-202ENST00000342785 SMIM29Q86T20 159 aa4.79□□□□□ -1.64
VCAN-202ENST00000342785 SPEGQ15772 3267 aa4.79□□□□□ -1.64
VCAN-202ENST00000342785 REV3LO60673 3130 aa4.79□□□□□ -1.64
VCAN-202ENST00000342785 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
VCAN-202ENST00000342785 TM2D3Q9BRN9 247 aa4.79□□□□□ -1.64
VCAN-202ENST00000342785 A0A1B0GW54 56 aa4.78□□□□□ -1.64
VCAN-202ENST00000342785 COL6A3P12111 3177 aa4.78□□□□□ -1.64
VCAN-202ENST00000342785 DNAH10OSP0CZ25 163 aa4.78□□□□□ -1.64
VCAN-202ENST00000342785 LINC01600Q96MT4 127 aa4.78□□□□□ -1.64
VCAN-202ENST00000342785 CFAP47Q6ZTR5 3102 aa4.78□□□□□ -1.64
VCAN-202ENST00000342785 ITPR2Q14571 2701 aa4.78□□□□□ -1.64
VCAN-202ENST00000342785 IGHV6-1A0A0B4J1U7 121 aa4.78□□□□□ -1.64
VCAN-202ENST00000342785 SERTAD4-AS1Q5TG53 156 aa4.77□□□□□ -1.65
VCAN-202ENST00000342785 LINC00476Q8WZB0 136 aa4.77□□□□□ -1.65
VCAN-202ENST00000342785 ZANQ9Y493 2812 aa4.77□□□□□ -1.65
VCAN-202ENST00000342785 C15orf56Q8N910 161 aa4.76□□□□□ -1.65
VCAN-202ENST00000342785 KCNQ1DNQ9H478 68 aa4.76□□□□□ -1.65
VCAN-202ENST00000342785 H0Y9P7 68 aa4.76□□□□□ -1.65
VCAN-202ENST00000342785 PCOTHQ58A44 107 aa4.76□□□□□ -1.65
VCAN-202ENST00000342785 FAM168BA1KXE4 195 aa4.76□□□□□ -1.65
VCAN-202ENST00000342785 CIRBP-AS1Q8TBR5 109 aa4.76□□□□□ -1.65
VCAN-202ENST00000342785 UTP20O75691 2785 aaKnown RBP4.76□□□□□ -1.65
VCAN-202ENST00000342785 A6NED7 52 aa4.75□□□□□ -1.65
VCAN-202ENST00000342785 KRTAP10-11P60412 298 aa4.75□□□□□ -1.65
VCAN-202ENST00000342785 MDFIQ99750 246 aa4.75□□□□□ -1.65
VCAN-202ENST00000342785 ASH1LQ9NR48 2969 aaKnown RBP4.75□□□□□ -1.65
VCAN-202ENST00000342785 IGLV5-52A0A0A0MRZ9 124 aa4.75□□□□□ -1.65
VCAN-202ENST00000342785 TRBV7-4A0A0J9YYF1 115 aa4.75□□□□□ -1.65
VCAN-202ENST00000342785 PHF5AQ7RTV0 110 aaKnown RBP4.75□□□□□ -1.65
VCAN-202ENST00000342785 CHTF8P0CG12 524 aa4.74□□□□□ -1.65
VCAN-202ENST00000342785 C16orf90A8MZG2 172 aa4.74□□□□□ -1.65
VCAN-202ENST00000342785 IGLV1-50A0A075B6I6 118 aa4.74□□□□□ -1.65
VCAN-202ENST00000342785 EYSQ5T1H1 3165 aa4.74□□□□□ -1.65
VCAN-202ENST00000342785 PSPHP1O15172 72 aa4.74□□□□□ -1.65
VCAN-202ENST00000342785 LRBAP50851 2863 aa4.73□□□□□ -1.65
VCAN-202ENST00000342785 EPM2AB3EWF7 344 aa4.73□□□□□ -1.65
VCAN-202ENST00000342785 hDV103S1A0JD37 113 aa4.73□□□□□ -1.65
VCAN-202ENST00000342785 C1orf134Q5TEV5 83 aa4.73□□□□□ -1.65
VCAN-202ENST00000342785 C1orf64Q8NEQ6 169 aa4.73□□□□□ -1.65
VCAN-202ENST00000342785 Q8N377 158 aa4.72□□□□□ -1.65
VCAN-202ENST00000342785 NBDYA0A0U1RRE5 68 aa4.71□□□□□ -1.65
VCAN-202ENST00000342785 C4orf26Q17RF5 130 aa4.71□□□□□ -1.65
VCAN-202ENST00000342785 OBSCN-AS1Q96MR7 158 aa4.71□□□□□ -1.65
VCAN-202ENST00000342785 SEC61GP60059 68 aa4.71□□□□□ -1.66
VCAN-202ENST00000342785 PRR15LQ9BU68 103 aa4.71□□□□□ -1.66
VCAN-202ENST00000342785 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
VCAN-202ENST00000342785 K7EIL1 84 aa4.71□□□□□ -1.66
VCAN-202ENST00000342785 NIPBLQ6KC79 2804 aaeCLIP4.7□□□□□ -1.66
VCAN-202ENST00000342785 BAHCC1Q9P281 2608 aa4.7□□□□□ -1.66
VCAN-202ENST00000342785 C1orf195Q5TG92 126 aa4.7□□□□□ -1.66
VCAN-202ENST00000342785 K7EQZ3 153 aa4.7□□□□□ -1.66
VCAN-202ENST00000342785 KLKP1Q107X0 134 aa4.7□□□□□ -1.66
VCAN-202ENST00000342785 MOBPQ13875 183 aa4.7□□□□□ -1.66
VCAN-202ENST00000342785 STAB2Q8WWQ8 2551 aa4.69□□□□□ -1.66
VCAN-202ENST00000342785 RPL37AP61513 92 aaKnown RBP4.69□□□□□ -1.66
VCAN-202ENST00000342785 CASC10Q5T4H9 136 aa4.69□□□□□ -1.66
VCAN-202ENST00000342785 A0A0G2JQZ4 141 aa4.68□□□□□ -1.66
VCAN-202ENST00000342785 A0A1W2PNN7 141 aa4.68□□□□□ -1.66
VCAN-202ENST00000342785 CELSR2Q9HCU4 2923 aa4.68□□□□□ -1.66
VCAN-202ENST00000342785 TLX1NBP0CAT3 122 aa4.68□□□□□ -1.66
VCAN-202ENST00000342785 ERC2-IT1O76042 136 aa4.68□□□□□ -1.66
VCAN-202ENST00000342785 A0A1W2PNM2 257 aa4.67□□□□□ -1.66
VCAN-202ENST00000342785 IGFL1Q6UW32 110 aa4.67□□□□□ -1.66
VCAN-202ENST00000342785 PRO0628Q9UI54 55 aa4.67□□□□□ -1.66
VCAN-202ENST00000342785 H7BZZ5 65 aa4.67□□□□□ -1.66
VCAN-202ENST00000342785 PMAIP1Q13794 54 aa4.67□□□□□ -1.66
VCAN-202ENST00000342785 NF1P21359 2839 aa4.67□□□□□ -1.66
VCAN-202ENST00000342785 TRAV22A0A0B4J277 110 aa4.66□□□□□ -1.66
VCAN-202ENST00000342785 Q8NDZ9 215 aa4.66□□□□□ -1.66
VCAN-202ENST00000342785 RETNLBQ9BQ08 111 aa4.66□□□□□ -1.66
VCAN-202ENST00000342785 DMXL1Q9Y485 3027 aa4.66□□□□□ -1.66
VCAN-202ENST00000342785 HIVEP1P15822 2718 aa4.66□□□□□ -1.66
VCAN-202ENST00000342785 TP53AIP1Q9HCN2 124 aa4.66□□□□□ -1.66
VCAN-202ENST00000342785 PLA2G2DQ9UNK4 145 aa4.66□□□□□ -1.66
VCAN-202ENST00000342785 LOC400499M0QZD8 3231 aa4.65□□□□□ -1.66
VCAN-202ENST00000342785 C9orf163Q8N9P6 203 aa4.65□□□□□ -1.67
VCAN-202ENST00000342785 H3BPC8 53 aa4.65□□□□□ -1.67
VCAN-202ENST00000342785 RTL8CO15255 209 aa4.65□□□□□ -1.67
VCAN-202ENST00000342785 IGLV5-48A0A075B6I7 105 aa4.64□□□□□ -1.67
VCAN-202ENST00000342785 A8MWP4 228 aa4.64□□□□□ -1.67
VCAN-202ENST00000342785 CR1P17927 2039 aa4.64□□□□□ -1.67
VCAN-202ENST00000342785 WIPF1O43516 503 aa4.64□□□□□ -1.67
VCAN-202ENST00000342785 APCP25054 2843 aa4.63□□□□□ -1.67
VCAN-202ENST00000342785 LIMD2Q9BT23 127 aa4.63□□□□□ -1.67
VCAN-202ENST00000342785 PRR15Q8IV56 129 aa4.62□□□□□ -1.67
VCAN-202ENST00000342785 KMT2BQ9UMN6 2715 aaPredicted RBP4.62□□□□□ -1.67
VCAN-202ENST00000342785 SPACA4Q8TDM5 124 aa4.61□□□□□ -1.67
VCAN-202ENST00000342785 IGKV2D-30A0A075B6S6 120 aa4.61□□□□□ -1.67
VCAN-202ENST00000342785 IGKV2-30P06310 120 aa4.61□□□□□ -1.67
VCAN-202ENST00000342785 DCHS2Q6V1P9 2916 aa4.61□□□□□ -1.67
VCAN-202ENST00000342785 SPINK1P00995 79 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms