RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 NDUFC1O43677 76 aa8.38□□□□□ -1.07
SNRNP48-201ENST00000342415 NDUFB1O75438 58 aa8.38□□□□□ -1.07
SNRNP48-201ENST00000342415 PRLHP81277 87 aa8.37□□□□□ -1.07
SNRNP48-201ENST00000342415 C7orf33Q8WU49 177 aa8.37□□□□□ -1.07
SNRNP48-201ENST00000342415 NIPBLQ6KC79 2804 aaeCLIP8.37□□□□□ -1.07
SNRNP48-201ENST00000342415 Q8NAQ8 132 aa8.36□□□□□ -1.07
SNRNP48-201ENST00000342415 PRYO14603 147 aa8.36□□□□□ -1.07
SNRNP48-201ENST00000342415 A0A087WSZ3 146 aa8.36□□□□□ -1.07
SNRNP48-201ENST00000342415 TRBV7-6A0A0J9YX20 115 aa8.36□□□□□ -1.07
SNRNP48-201ENST00000342415 SPTSSBQ8NFR3 76 aa8.36□□□□□ -1.07
SNRNP48-201ENST00000342415 LINC00208Q96KT6 92 aa8.35□□□□□ -1.07
SNRNP48-201ENST00000342415 CYSTM1Q9H1C7 97 aa8.35□□□□□ -1.07
SNRNP48-201ENST00000342415 KRTAP10-3P60369 221 aa8.34□□□□□ -1.07
SNRNP48-201ENST00000342415 SMIM29Q86T20 159 aa8.34□□□□□ -1.07
SNRNP48-201ENST00000342415 ST20-AS1Q8NBB2 130 aa8.34□□□□□ -1.07
SNRNP48-201ENST00000342415 Q6ZRP5 223 aa8.34□□□□□ -1.07
SNRNP48-201ENST00000342415 PSPHP1O15172 72 aa8.34□□□□□ -1.07
SNRNP48-201ENST00000342415 CXCL6P80162 114 aa8.34□□□□□ -1.07
SNRNP48-201ENST00000342415 ELOF1P60002 83 aaKnown RBP8.33□□□□□ -1.08
SNRNP48-201ENST00000342415 IGLV6-57P01721 117 aa8.33□□□□□ -1.08
SNRNP48-201ENST00000342415 C2orf48Q96LS8 159 aa8.33□□□□□ -1.08
SNRNP48-201ENST00000342415 IGLV9-49A0A0B4J1Y8 123 aa8.32□□□□□ -1.08
SNRNP48-201ENST00000342415 IGKV4-1P06312 121 aa8.32□□□□□ -1.08
SNRNP48-201ENST00000342415 C22orf24Q9Y442 160 aa8.32□□□□□ -1.08
SNRNP48-201ENST00000342415 A0A0G2JQZ4 141 aa8.31□□□□□ -1.08
SNRNP48-201ENST00000342415 A0A1W2PNN7 141 aa8.31□□□□□ -1.08
SNRNP48-201ENST00000342415 FAM168BA1KXE4 195 aa8.31□□□□□ -1.08
SNRNP48-201ENST00000342415 VPREB1P12018 145 aa8.31□□□□□ -1.08
SNRNP48-201ENST00000342415 RPS28P62857 69 aaKnown RBP8.31□□□□□ -1.08
SNRNP48-201ENST00000342415 SPINK6Q6UWN8 80 aa8.31□□□□□ -1.08
SNRNP48-201ENST00000342415 LINC00167Q96N53 147 aa8.31□□□□□ -1.08
SNRNP48-201ENST00000342415 MRPL55Q7Z7F7 128 aaKnown RBP8.31□□□□□ -1.08
SNRNP48-201ENST00000342415 KRTAP1-3Q8IUG1 177 aa8.31□□□□□ -1.08
SNRNP48-201ENST00000342415 LOC110117498A0A087WWA1 95 aa8.3□□□□□ -1.08
SNRNP48-201ENST00000342415 LINC01600Q96MT4 127 aa8.3□□□□□ -1.08
SNRNP48-201ENST00000342415 Q8NDZ9 215 aa8.3□□□□□ -1.08
SNRNP48-201ENST00000342415 REG3GQ6UW15 175 aa8.29□□□□□ -1.08
SNRNP48-201ENST00000342415 B9D2Q9BPU9 175 aa8.29□□□□□ -1.08
SNRNP48-201ENST00000342415 LINC00474Q9P2X8 69 aa8.29□□□□□ -1.08
SNRNP48-201ENST00000342415 SERTAD4-AS1Q5TG53 156 aa8.28□□□□□ -1.08
SNRNP48-201ENST00000342415 ATP5EP56381 51 aaPredicted RBP8.27□□□□□ -1.09
SNRNP48-201ENST00000342415 Q9BRP9 147 aa8.25□□□□□ -1.09
SNRNP48-201ENST00000342415 PCOTHQ58A44 107 aa8.24□□□□□ -1.09
SNRNP48-201ENST00000342415 LINC01556Q5JQF7 62 aa8.24□□□□□ -1.09
SNRNP48-201ENST00000342415 PRR34Q9NV39 138 aa8.23□□□□□ -1.09
SNRNP48-201ENST00000342415 H7BZZ5 65 aa8.23□□□□□ -1.09
SNRNP48-201ENST00000342415 LINC00612Q8N6U2 182 aa8.23□□□□□ -1.09
SNRNP48-201ENST00000342415 RPL37AP61513 92 aaKnown RBP8.23□□□□□ -1.09
SNRNP48-201ENST00000342415 KRTAP24-1Q3LI83 254 aa8.23□□□□□ -1.09
SNRNP48-201ENST00000342415 LINC00528Q8N1L1 170 aa8.23□□□□□ -1.09
SNRNP48-201ENST00000342415 OBSCN-AS1Q96MR7 158 aa8.23□□□□□ -1.09
SNRNP48-201ENST00000342415 C1orf195Q5TG92 126 aa8.22□□□□□ -1.09
SNRNP48-201ENST00000342415 CHKB-CPT1BH3BT56 60 aa8.21□□□□□ -1.09
SNRNP48-201ENST00000342415 KRTAP1-1Q07627 177 aa8.21□□□□□ -1.09
SNRNP48-201ENST00000342415 Q6ZRX8 168 aa8.21□□□□□ -1.1
SNRNP48-201ENST00000342415 C15orf56Q8N910 161 aa8.21□□□□□ -1.1
SNRNP48-201ENST00000342415 HCG22E2RYF7 251 aa8.21□□□□□ -1.1
SNRNP48-201ENST00000342415 CASC2Q6XLA1 102 aa8.2□□□□□ -1.1
SNRNP48-201ENST00000342415 GVQW2A0A096LPI5 108 aaPredicted RBP8.2□□□□□ -1.1
SNRNP48-201ENST00000342415 STAB2Q8WWQ8 2551 aa8.19□□□□□ -1.1
SNRNP48-201ENST00000342415 TRBV7-4A0A0J9YYF1 115 aa8.19□□□□□ -1.1
SNRNP48-201ENST00000342415 CHTF8P0CG12 524 aa8.19□□□□□ -1.1
SNRNP48-201ENST00000342415 C14orf177Q52M58 125 aa8.19□□□□□ -1.1
SNRNP48-201ENST00000342415 LINC00476Q8WZB0 136 aa8.19□□□□□ -1.1
SNRNP48-201ENST00000342415 K7EQZ3 153 aa8.19□□□□□ -1.1
SNRNP48-201ENST00000342415 Q8N377 158 aa8.19□□□□□ -1.1
SNRNP48-201ENST00000342415 Q8NBF4 154 aa8.19□□□□□ -1.1
SNRNP48-201ENST00000342415 LINC00336Q6ZUF6 198 aa8.18□□□□□ -1.1
SNRNP48-201ENST00000342415 A6NED7 52 aa8.18□□□□□ -1.1
SNRNP48-201ENST00000342415 LINC00588Q9Y4M8 146 aa8.18□□□□□ -1.1
SNRNP48-201ENST00000342415 CASC10Q5T4H9 136 aa8.18□□□□□ -1.1
SNRNP48-201ENST00000342415 H0Y9P7 68 aa8.17□□□□□ -1.1
SNRNP48-201ENST00000342415 PRO0628Q9UI54 55 aa8.17□□□□□ -1.1
SNRNP48-201ENST00000342415 V9GYY9 64 aa8.16□□□□□ -1.1
SNRNP48-201ENST00000342415 KLKP1Q107X0 134 aa8.16□□□□□ -1.1
SNRNP48-201ENST00000342415 IGHV6-1A0A0B4J1U7 121 aa8.16□□□□□ -1.1
SNRNP48-201ENST00000342415 PHF5AQ7RTV0 110 aaKnown RBP8.15□□□□□ -1.1
SNRNP48-201ENST00000342415 CSMD2Q7Z408 3487 aa8.15□□□□□ -1.11
SNRNP48-201ENST00000342415 BCE1O60756 84 aa8.14□□□□□ -1.11
SNRNP48-201ENST00000342415 LY6G6CO95867 125 aa8.14□□□□□ -1.11
SNRNP48-201ENST00000342415 PRR15LQ9BU68 103 aa8.14□□□□□ -1.11
SNRNP48-201ENST00000342415 ERC2-IT1O76042 136 aa8.14□□□□□ -1.11
SNRNP48-201ENST00000342415 KMT2BQ9UMN6 2715 aaPredicted RBP8.14□□□□□ -1.11
SNRNP48-201ENST00000342415 KRTAP10-11P60412 298 aa8.14□□□□□ -1.11
SNRNP48-201ENST00000342415 PMAIP1Q13794 54 aa8.12□□□□□ -1.11
SNRNP48-201ENST00000342415 KCNQ1DNQ9H478 68 aa8.12□□□□□ -1.11
SNRNP48-201ENST00000342415 RETNLBQ9BQ08 111 aa8.11□□□□□ -1.11
SNRNP48-201ENST00000342415 C1orf64Q8NEQ6 169 aa8.11□□□□□ -1.11
SNRNP48-201ENST00000342415 A0A1W2PNM2 257 aa8.1□□□□□ -1.11
SNRNP48-201ENST00000342415 H3BNG1 76 aa8.1□□□□□ -1.11
SNRNP48-201ENST00000342415 IGLV1-50A0A075B6I6 118 aa8.1□□□□□ -1.11
SNRNP48-201ENST00000342415 OXTP01178 125 aa8.09□□□□□ -1.11
SNRNP48-201ENST00000342415 CIRBP-AS1Q8TBR5 109 aa8.08□□□□□ -1.12
SNRNP48-201ENST00000342415 EPM2AB3EWF7 344 aa8.07□□□□□ -1.12
SNRNP48-201ENST00000342415 F8WDY8 70 aa8.07□□□□□ -1.12
SNRNP48-201ENST00000342415 DNAH10OSP0CZ25 163 aa8.06□□□□□ -1.12
SNRNP48-201ENST00000342415 VWFP04275 2813 aa8.06□□□□□ -1.12
SNRNP48-201ENST00000342415 PDZD2O15018 2839 aa8.06□□□□□ -1.12
SNRNP48-201ENST00000342415 IGFL1Q6UW32 110 aa8.05□□□□□ -1.12
SNRNP48-201ENST00000342415 C4orf48Q5BLP8 95 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms