RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 PCOTHQ58A44 107 aa12.88□□□□□ -0.35
SEMA6C-201ENST00000341697 IGSF10Q6WRI0 2623 aa12.88□□□□□ -0.35
SEMA6C-201ENST00000341697 TRBV7-7A0A0K0K1E9 115 aa12.87□□□□□ -0.35
SEMA6C-201ENST00000341697 TLX1NBP0CAT3 122 aa12.87□□□□□ -0.35
SEMA6C-201ENST00000341697 BRK1Q8WUW1 75 aa12.86□□□□□ -0.35
SEMA6C-201ENST00000341697 EIF4EBP3O60516 100 aaPredicted RBP12.86□□□□□ -0.35
SEMA6C-201ENST00000341697 CFAP54Q96N23 3096 aa12.86□□□□□ -0.35
SEMA6C-201ENST00000341697 TEP1Q99973 2627 aaKnown RBP12.86□□□□□ -0.35
SEMA6C-201ENST00000341697 C9orf129Q5T035 196 aaKnown RBP12.86□□□□□ -0.35
SEMA6C-201ENST00000341697 K7ERS5 55 aa12.85□□□□□ -0.35
SEMA6C-201ENST00000341697 LINC00528Q8N1L1 170 aa12.84□□□□□ -0.35
SEMA6C-201ENST00000341697 TMEM254Q8TBM7 123 aa12.84□□□□□ -0.35
SEMA6C-201ENST00000341697 ZNF575Q86XF7 245 aa12.83□□□□□ -0.36
SEMA6C-201ENST00000341697 TRIOO75962 3097 aa12.83□□□□□ -0.36
SEMA6C-201ENST00000341697 CDH23Q9H251 3354 aa12.82□□□□□ -0.36
SEMA6C-201ENST00000341697 hDV103S1A0JD37 113 aa12.82□□□□□ -0.36
SEMA6C-201ENST00000341697 SMIM29Q86T20 159 aa12.82□□□□□ -0.36
SEMA6C-201ENST00000341697 PLA2G2DQ9UNK4 145 aa12.81□□□□□ -0.36
SEMA6C-201ENST00000341697 CASC10Q5T4H9 136 aa12.81□□□□□ -0.36
SEMA6C-201ENST00000341697 UNC79Q9P2D8 2635 aa12.8□□□□□ -0.36
SEMA6C-201ENST00000341697 TRBV7-4A0A0J9YYF1 115 aa12.8□□□□□ -0.36
SEMA6C-201ENST00000341697 LINC00336Q6ZUF6 198 aa12.8□□□□□ -0.36
SEMA6C-201ENST00000341697 TP53AIP1Q9HCN2 124 aa12.79□□□□□ -0.36
SEMA6C-201ENST00000341697 CNBPP62633 177 aaKnown RBP12.78□□□□□ -0.36
SEMA6C-201ENST00000341697 C1orf64Q8NEQ6 169 aa12.78□□□□□ -0.36
SEMA6C-201ENST00000341697 XIRP2A4UGR9 3374 aa12.78□□□□□ -0.36
SEMA6C-201ENST00000341697 IGKV2D-30A0A075B6S6 120 aa12.78□□□□□ -0.36
SEMA6C-201ENST00000341697 IGKV2-30P06310 120 aa12.78□□□□□ -0.36
SEMA6C-201ENST00000341697 ZNF861PO60384 105 aa12.77□□□□□ -0.37
SEMA6C-201ENST00000341697 LINC00313P59037 77 aa12.74□□□□□ -0.37
SEMA6C-201ENST00000341697 SMIM26A0A096LP01 95 aa12.71□□□□□ -0.37
SEMA6C-201ENST00000341697 A6NED7 52 aa12.71□□□□□ -0.37
SEMA6C-201ENST00000341697 A0A1W2PNN7 141 aa12.71□□□□□ -0.37
SEMA6C-201ENST00000341697 SPINK1P00995 79 aa12.7□□□□□ -0.38
SEMA6C-201ENST00000341697 TEX15Q9BXT5 2789 aa12.7□□□□□ -0.38
SEMA6C-201ENST00000341697 SMR3BP02814 79 aaPredicted RBP12.67□□□□□ -0.38
SEMA6C-201ENST00000341697 SSBP3-AS1Q7Z2R9 100 aa12.67□□□□□ -0.38
SEMA6C-201ENST00000341697 J3QL48 77 aa12.66□□□□□ -0.38
SEMA6C-201ENST00000341697 COL6A5A8TX70 2615 aa12.66□□□□□ -0.38
SEMA6C-201ENST00000341697 IGFL1Q6UW32 110 aa12.65□□□□□ -0.38
SEMA6C-201ENST00000341697 Q8N377 158 aa12.65□□□□□ -0.38
SEMA6C-201ENST00000341697 BAHCC1Q9P281 2608 aa12.65□□□□□ -0.39
SEMA6C-201ENST00000341697 STAB1Q9NY15 2570 aa12.64□□□□□ -0.39
SEMA6C-201ENST00000341697 IGLV7-43P04211 117 aa12.64□□□□□ -0.39
SEMA6C-201ENST00000341697 PSORS1C2Q9UIG4 136 aa12.64□□□□□ -0.39
SEMA6C-201ENST00000341697 A8MWP4 228 aa12.63□□□□□ -0.39
SEMA6C-201ENST00000341697 VPS13AQ96RL7 3174 aa12.63□□□□□ -0.39
SEMA6C-201ENST00000341697 SETXQ7Z333 2677 aaKnown RBP12.63□□□□□ -0.39
SEMA6C-201ENST00000341697 C8orf87E5RJ46 101 aa12.61□□□□□ -0.39
SEMA6C-201ENST00000341697 Q96NJ1 140 aa12.61□□□□□ -0.39
SEMA6C-201ENST00000341697 SZT2Q5T011 3432 aa12.6□□□□□ -0.39
SEMA6C-201ENST00000341697 LINC00304Q8N9R0 145 aa12.6□□□□□ -0.39
SEMA6C-201ENST00000341697 SPAG11AQ6PDA7 123 aa12.59□□□□□ -0.39
SEMA6C-201ENST00000341697 TNP2Q05952 138 aa12.59□□□□□ -0.39
SEMA6C-201ENST00000341697 CHD6Q8TD26 2715 aa12.59□□□□□ -0.39
SEMA6C-201ENST00000341697 C7orf65Q6ZTY9 151 aa12.59□□□□□ -0.39
SEMA6C-201ENST00000341697 TRAV22A0A0B4J277 110 aa12.58□□□□□ -0.4
SEMA6C-201ENST00000341697 IGLV5-37A0A075B6J1 123 aa12.58□□□□□ -0.4
SEMA6C-201ENST00000341697 H3BPC8 53 aa12.58□□□□□ -0.4
SEMA6C-201ENST00000341697 K7EQZ3 153 aa12.55□□□□□ -0.4
SEMA6C-201ENST00000341697 SVIPQ8NHG7 77 aa12.55□□□□□ -0.4
SEMA6C-201ENST00000341697 FAM104AQ969W3 186 aa12.55□□□□□ -0.4
SEMA6C-201ENST00000341697 ATP11AUNQ6ZP68 121 aa12.53□□□□□ -0.4
SEMA6C-201ENST00000341697 ANAPC11Q9NYG5 84 aa12.53□□□□□ -0.4
SEMA6C-201ENST00000341697 MAP1AP78559 2803 aaPredicted RBP12.53□□□□□ -0.4
SEMA6C-201ENST00000341697 SPRR4Q96PI1 79 aa12.53□□□□□ -0.4
SEMA6C-201ENST00000341697 ERC2-IT1O76042 136 aa12.53□□□□□ -0.4
SEMA6C-201ENST00000341697 MRPL34Q9BQ48 92 aaKnown RBP12.52□□□□□ -0.4
SEMA6C-201ENST00000341697 ACYP2P14621 99 aa12.49□□□□□ -0.41
SEMA6C-201ENST00000341697 A0A0G2JQZ4 141 aa12.48□□□□□ -0.41
SEMA6C-201ENST00000341697 A0A0U1RQV1 116 aa12.47□□□□□ -0.41
SEMA6C-201ENST00000341697 PRR15Q8IV56 129 aa12.46□□□□□ -0.42
SEMA6C-201ENST00000341697 LOC101927531A0A1B0GV80 90 aa12.44□□□□□ -0.42
SEMA6C-201ENST00000341697 C8orf17Q9NRJ1 99 aa12.44□□□□□ -0.42
SEMA6C-201ENST00000341697 NOTCH1P46531 2555 aa12.43□□□□□ -0.42
SEMA6C-201ENST00000341697 DSCR10P59022 87 aa12.43□□□□□ -0.42
SEMA6C-201ENST00000341697 A0A1B0GVX0 72 aa12.42□□□□□ -0.42
SEMA6C-201ENST00000341697 PSPHP1O15172 72 aa12.42□□□□□ -0.42
SEMA6C-201ENST00000341697 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.42□□□□□ -0.42
SEMA6C-201ENST00000341697 FLNCQ14315 2725 aa12.4□□□□□ -0.42
SEMA6C-201ENST00000341697 TNRC18O15417 2968 aaPredicted RBP12.38□□□□□ -0.43
SEMA6C-201ENST00000341697 OBSCN-AS1Q96MR7 158 aa12.38□□□□□ -0.43
SEMA6C-201ENST00000341697 A0A1W2PNM2 257 aa12.38□□□□□ -0.43
SEMA6C-201ENST00000341697 LAMA1P25391 3075 aa12.37□□□□□ -0.43
SEMA6C-201ENST00000341697 FRYQ5TBA9 3013 aa12.35□□□□□ -0.43
SEMA6C-201ENST00000341697 GCN1Q92616 2671 aaKnown RBP12.35□□□□□ -0.43
SEMA6C-201ENST00000341697 IGLV5-48A0A075B6I7 105 aa12.34□□□□□ -0.43
SEMA6C-201ENST00000341697 UBR5O95071 2799 aaPredicted RBP12.34□□□□□ -0.43
SEMA6C-201ENST00000341697 C9orf92A6NGG3 77 aa12.34□□□□□ -0.43
SEMA6C-201ENST00000341697 A0A1B0GU69 56 aa12.31□□□□□ -0.44
SEMA6C-201ENST00000341697 FRYLO94915 3013 aa12.3□□□□□ -0.44
SEMA6C-201ENST00000341697 COL6A3P12111 3177 aa12.29□□□□□ -0.44
SEMA6C-201ENST00000341697 PLAC8Q9NZF1 115 aa12.28□□□□□ -0.44
SEMA6C-201ENST00000341697 KRTAP1-5Q9BYS1 174 aa12.27□□□□□ -0.44
SEMA6C-201ENST00000341697 VCANP13611 3396 aa12.27□□□□□ -0.45
SEMA6C-201ENST00000341697 ATMQ13315 3056 aa12.26□□□□□ -0.45
SEMA6C-201ENST00000341697 CELSR3Q9NYQ7 3312 aa12.25□□□□□ -0.45
SEMA6C-201ENST00000341697 ITPR2Q14571 2701 aa12.22□□□□□ -0.45
SEMA6C-201ENST00000341697 CD164Q04900 197 aa12.22□□□□□ -0.45
SEMA6C-201ENST00000341697 ITPR1Q14643 2758 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 325.5 ms