RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 A0A087WSZ3 146 aa8.09□□□□□ -1.11
CDH5-201ENST00000341529 FAM104AQ969W3 186 aa8.09□□□□□ -1.12
CDH5-201ENST00000341529 TRBV7-7A0A0K0K1E9 115 aa8.08□□□□□ -1.12
CDH5-201ENST00000341529 KIAA0087Q14695 138 aa8.08□□□□□ -1.12
CDH5-201ENST00000341529 C22orf24Q9Y442 160 aa8.08□□□□□ -1.12
CDH5-201ENST00000341529 MRPL55Q7Z7F7 128 aaKnown RBP8.07□□□□□ -1.12
CDH5-201ENST00000341529 A0A0U1RQV1 116 aa8.06□□□□□ -1.12
CDH5-201ENST00000341529 REG3GQ6UW15 175 aa8.06□□□□□ -1.12
CDH5-201ENST00000341529 LINC00167Q96N53 147 aa8.06□□□□□ -1.12
CDH5-201ENST00000341529 FAM168BA1KXE4 195 aa8.05□□□□□ -1.12
CDH5-201ENST00000341529 IL17DQ8TAD2 202 aa8.05□□□□□ -1.12
CDH5-201ENST00000341529 Q6ZRP5 223 aa8.05□□□□□ -1.12
CDH5-201ENST00000341529 ST20-AS1Q8NBB2 130 aa8.05□□□□□ -1.12
CDH5-201ENST00000341529 C2orf48Q96LS8 159 aa8.05□□□□□ -1.12
CDH5-201ENST00000341529 LINC01556Q5JQF7 62 aa8.04□□□□□ -1.12
CDH5-201ENST00000341529 CHTF8P0CG12 524 aa8.03□□□□□ -1.12
CDH5-201ENST00000341529 TENM4Q6N022 2769 aa8.03□□□□□ -1.12
CDH5-201ENST00000341529 TRAV7A0A075B6U4 112 aa8.03□□□□□ -1.12
CDH5-201ENST00000341529 KRTAP10-11P60412 298 aa8.03□□□□□ -1.12
CDH5-201ENST00000341529 CSMD2Q7Z408 3487 aa8.03□□□□□ -1.12
CDH5-201ENST00000341529 LINC01561Q8N1V8 128 aa8.02□□□□□ -1.13
CDH5-201ENST00000341529 LINC00588Q9Y4M8 146 aa8.02□□□□□ -1.13
CDH5-201ENST00000341529 SPENQ96T58 3664 aaKnown RBP8.02□□□□□ -1.13
CDH5-201ENST00000341529 A0A0G2JQZ4 141 aa8.02□□□□□ -1.13
CDH5-201ENST00000341529 A0A1W2PNN7 141 aa8.02□□□□□ -1.13
CDH5-201ENST00000341529 NHLRC4P0CG21 123 aaPredicted RBP8.01□□□□□ -1.13
CDH5-201ENST00000341529 LINC00208Q96KT6 92 aa8.01□□□□□ -1.13
CDH5-201ENST00000341529 Q9BRP9 147 aa8.01□□□□□ -1.13
CDH5-201ENST00000341529 PKIGQ9Y2B9 76 aa8.01□□□□□ -1.13
CDH5-201ENST00000341529 SERTAD4-AS1Q5TG53 156 aa7.99□□□□□ -1.13
CDH5-201ENST00000341529 Q6ZQT0 140 aa7.99□□□□□ -1.13
CDH5-201ENST00000341529 C4orf48Q5BLP8 95 aa7.98□□□□□ -1.13
CDH5-201ENST00000341529 VPREB1P12018 145 aa7.98□□□□□ -1.13
CDH5-201ENST00000341529 ZFHX3Q15911 3703 aa7.97□□□□□ -1.13
CDH5-201ENST00000341529 ELOF1P60002 83 aaKnown RBP7.97□□□□□ -1.13
CDH5-201ENST00000341529 CASC10Q5T4H9 136 aa7.97□□□□□ -1.13
CDH5-201ENST00000341529 PHF5AQ7RTV0 110 aaKnown RBP7.97□□□□□ -1.13
CDH5-201ENST00000341529 TMEM254Q8TBM7 123 aa7.97□□□□□ -1.13
CDH5-201ENST00000341529 CHKB-CPT1BH3BT56 60 aa7.96□□□□□ -1.13
CDH5-201ENST00000341529 SPTSSBQ8NFR3 76 aa7.96□□□□□ -1.13
CDH5-201ENST00000341529 CIRBP-AS1Q8TBR5 109 aa7.96□□□□□ -1.14
CDH5-201ENST00000341529 SMIM29Q86T20 159 aa7.95□□□□□ -1.14
CDH5-201ENST00000341529 TM2D3Q9BRN9 247 aa7.95□□□□□ -1.14
CDH5-201ENST00000341529 PCOTHQ58A44 107 aa7.95□□□□□ -1.14
CDH5-201ENST00000341529 RETNLBQ9BQ08 111 aa7.95□□□□□ -1.14
CDH5-201ENST00000341529 IGHV6-1A0A0B4J1U7 121 aa7.94□□□□□ -1.14
CDH5-201ENST00000341529 IGLV6-57P01721 117 aa7.94□□□□□ -1.14
CDH5-201ENST00000341529 PRYO14603 147 aa7.93□□□□□ -1.14
CDH5-201ENST00000341529 MDFIQ99750 246 aa7.93□□□□□ -1.14
CDH5-201ENST00000341529 C15orf56Q8N910 161 aa7.93□□□□□ -1.14
CDH5-201ENST00000341529 LINC00612Q8N6U2 182 aa7.92□□□□□ -1.14
CDH5-201ENST00000341529 PRR34Q9NV39 138 aa7.92□□□□□ -1.14
CDH5-201ENST00000341529 FBN1P35555 2871 aaKnown RBP7.92□□□□□ -1.14
CDH5-201ENST00000341529 RPL37AP61513 92 aaKnown RBP7.91□□□□□ -1.14
CDH5-201ENST00000341529 DNAH10OSP0CZ25 163 aa7.91□□□□□ -1.14
CDH5-201ENST00000341529 NBPF19A0A087WUL8 3843 aa7.9□□□□□ -1.14
CDH5-201ENST00000341529 Q6ZRX8 168 aa7.9□□□□□ -1.14
CDH5-201ENST00000341529 K7EIL1 84 aa7.9□□□□□ -1.15
CDH5-201ENST00000341529 CASC2Q6XLA1 102 aa7.9□□□□□ -1.15
CDH5-201ENST00000341529 NDUFC1O43677 76 aa7.89□□□□□ -1.15
CDH5-201ENST00000341529 IGLV5-52A0A0A0MRZ9 124 aa7.89□□□□□ -1.15
CDH5-201ENST00000341529 LINC00476Q8WZB0 136 aa7.89□□□□□ -1.15
CDH5-201ENST00000341529 PSPHP1O15172 72 aa7.88□□□□□ -1.15
CDH5-201ENST00000341529 NUPR2A6NF83 97 aa7.88□□□□□ -1.15
CDH5-201ENST00000341529 CRYGAP11844 174 aa7.88□□□□□ -1.15
CDH5-201ENST00000341529 H3BNG1 76 aa7.88□□□□□ -1.15
CDH5-201ENST00000341529 Q8NDZ9 215 aa7.88□□□□□ -1.15
CDH5-201ENST00000341529 GVQW2A0A096LPI5 108 aaPredicted RBP7.87□□□□□ -1.15
CDH5-201ENST00000341529 CXCL6P80162 114 aa7.87□□□□□ -1.15
CDH5-201ENST00000341529 LINC00528Q8N1L1 170 aa7.86□□□□□ -1.15
CDH5-201ENST00000341529 LINC00474Q9P2X8 69 aa7.86□□□□□ -1.15
CDH5-201ENST00000341529 TENM1Q9UKZ4 2725 aa7.86□□□□□ -1.15
CDH5-201ENST00000341529 OTOGQ6ZRI0 2925 aa7.86□□□□□ -1.15
CDH5-201ENST00000341529 SMIM26A0A096LP01 95 aa7.85□□□□□ -1.15
CDH5-201ENST00000341529 EPM2AB3EWF7 344 aa7.85□□□□□ -1.15
CDH5-201ENST00000341529 HCG22E2RYF7 251 aa7.85□□□□□ -1.15
CDH5-201ENST00000341529 C4orf26Q17RF5 130 aa7.85□□□□□ -1.15
CDH5-201ENST00000341529 Q8NBF4 154 aa7.85□□□□□ -1.15
CDH5-201ENST00000341529 SERP1Q9Y6X1 66 aa7.84□□□□□ -1.15
CDH5-201ENST00000341529 LOC110117498A0A087WWA1 95 aa7.84□□□□□ -1.15
CDH5-201ENST00000341529 ERC2-IT1O76042 136 aa7.84□□□□□ -1.16
CDH5-201ENST00000341529 TRBV7-6A0A0J9YX20 115 aa7.83□□□□□ -1.16
CDH5-201ENST00000341529 MOBPQ13875 183 aa7.83□□□□□ -1.16
CDH5-201ENST00000341529 H0Y9P7 68 aa7.83□□□□□ -1.16
CDH5-201ENST00000341529 Q8N377 158 aa7.83□□□□□ -1.16
CDH5-201ENST00000341529 C1orf134Q5TEV5 83 aa7.82□□□□□ -1.16
CDH5-201ENST00000341529 K7EQZ3 153 aa7.81□□□□□ -1.16
CDH5-201ENST00000341529 VWFP04275 2813 aa7.8□□□□□ -1.16
CDH5-201ENST00000341529 ZNF706Q9Y5V0 76 aaPredicted RBP7.8□□□□□ -1.16
CDH5-201ENST00000341529 F8WDY8 70 aa7.8□□□□□ -1.16
CDH5-201ENST00000341529 ANAPC11Q9NYG5 84 aa7.8□□□□□ -1.16
CDH5-201ENST00000341529 IGLV1-50A0A075B6I6 118 aa7.79□□□□□ -1.16
CDH5-201ENST00000341529 NBDYA0A0U1RRE5 68 aa7.79□□□□□ -1.16
CDH5-201ENST00000341529 A6NED7 52 aa7.79□□□□□ -1.16
CDH5-201ENST00000341529 KCNQ1DNQ9H478 68 aa7.79□□□□□ -1.16
CDH5-201ENST00000341529 C16orf90A8MZG2 172 aa7.78□□□□□ -1.16
CDH5-201ENST00000341529 PKD1L1Q8TDX9 2849 aa7.77□□□□□ -1.16
CDH5-201ENST00000341529 TRBV7-4A0A0J9YYF1 115 aa7.77□□□□□ -1.17
CDH5-201ENST00000341529 PDZD2O15018 2839 aa7.77□□□□□ -1.17
CDH5-201ENST00000341529 ATP5EP56381 51 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms