RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 HUWE1Q7Z6Z7 4374 aaKnown RBP6.87□□□□□ -1.31
HIF1A-202ENST00000337138 TRBV10-3A0A0K0K1G6 114 aa6.87□□□□□ -1.31
HIF1A-202ENST00000337138 H7BZZ5 65 aa6.87□□□□□ -1.31
HIF1A-202ENST00000337138 Q5XG85 94 aa6.87□□□□□ -1.31
HIF1A-202ENST00000337138 PKD1L1Q8TDX9 2849 aa6.86□□□□□ -1.31
HIF1A-202ENST00000337138 KRTAP10-3P60369 221 aa6.86□□□□□ -1.31
HIF1A-202ENST00000337138 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.85□□□□□ -1.31
HIF1A-202ENST00000337138 LINC00575Q6W349 94 aa6.85□□□□□ -1.31
HIF1A-202ENST00000337138 A0A1B0GUV1 79 aa6.85□□□□□ -1.31
HIF1A-202ENST00000337138 SEC61GP60059 68 aa6.85□□□□□ -1.31
HIF1A-202ENST00000337138 KIAA0087Q14695 138 aa6.85□□□□□ -1.31
HIF1A-202ENST00000337138 MUC7Q8TAX7 377 aa6.85□□□□□ -1.31
HIF1A-202ENST00000337138 RETNQ9HD89 108 aa6.85□□□□□ -1.31
HIF1A-202ENST00000337138 KRTAP24-1Q3LI83 254 aa6.84□□□□□ -1.31
HIF1A-202ENST00000337138 PRYO14603 147 aa6.84□□□□□ -1.31
HIF1A-202ENST00000337138 HIGD2AQ9BW72 106 aa6.84□□□□□ -1.31
HIF1A-202ENST00000337138 SPART-AS1P0CW21 52 aa6.83□□□□□ -1.32
HIF1A-202ENST00000337138 Q6ZQT0 140 aa6.83□□□□□ -1.32
HIF1A-202ENST00000337138 ZNF73O43830 326 aaPredicted RBP6.83□□□□□ -1.32
HIF1A-202ENST00000337138 C9orf66Q5T8R8 295 aa6.83□□□□□ -1.32
HIF1A-202ENST00000337138 IGKV2D-24A0A075B6R9 120 aa6.82□□□□□ -1.32
HIF1A-202ENST00000337138 APOC4P55056 127 aa6.82□□□□□ -1.32
HIF1A-202ENST00000337138 DMBT1Q9UGM3 2413 aaPredicted RBP6.82□□□□□ -1.32
HIF1A-202ENST00000337138 WIPF1O43516 503 aa6.82□□□□□ -1.32
HIF1A-202ENST00000337138 ATP5EP56381 51 aaPredicted RBP6.82□□□□□ -1.32
HIF1A-202ENST00000337138 ESRGQ1W209 222 aa6.82□□□□□ -1.32
HIF1A-202ENST00000337138 LYRM9A8MSI8 78 aa6.81□□□□□ -1.32
HIF1A-202ENST00000337138 PSCAO43653 123 aa6.81□□□□□ -1.32
HIF1A-202ENST00000337138 WFDC10BQ8IUB3 73 aa6.81□□□□□ -1.32
HIF1A-202ENST00000337138 MDFIQ99750 246 aa6.81□□□□□ -1.32
HIF1A-202ENST00000337138 UBE2BP63146 152 aa6.8□□□□□ -1.32
HIF1A-202ENST00000337138 COX17Q14061 63 aa6.8□□□□□ -1.32
HIF1A-202ENST00000337138 C6orf48Q9UBA6 75 aa6.79□□□□□ -1.32
HIF1A-202ENST00000337138 WFDC13Q8IUB5 93 aa6.79□□□□□ -1.32
HIF1A-202ENST00000337138 IGHV4-30-4P0DP06 118 aa6.78□□□□□ -1.32
HIF1A-202ENST00000337138 LYPD5Q6UWN5 251 aa6.78□□□□□ -1.32
HIF1A-202ENST00000337138 ETDCA0A1B0GVM5 59 aa6.78□□□□□ -1.32
HIF1A-202ENST00000337138 KLKP1Q107X0 134 aa6.78□□□□□ -1.32
HIF1A-202ENST00000337138 LELP1Q5T871 98 aa6.78□□□□□ -1.32
HIF1A-202ENST00000337138 CXCL6P80162 114 aa6.77□□□□□ -1.33
HIF1A-202ENST00000337138 PMAIP1Q13794 54 aa6.77□□□□□ -1.33
HIF1A-202ENST00000337138 FBN1P35555 2871 aaKnown RBP6.77□□□□□ -1.33
HIF1A-202ENST00000337138 RPL37AP8A6NKH3 93 aa6.77□□□□□ -1.33
HIF1A-202ENST00000337138 LY6G6CO95867 125 aa6.77□□□□□ -1.33
HIF1A-202ENST00000337138 PRKDCP78527 4128 aaKnown RBP6.77□□□□□ -1.33
HIF1A-202ENST00000337138 MP68P56378 58 aa6.77□□□□□ -1.33
HIF1A-202ENST00000337138 DEFB116Q30KQ4 102 aa6.77□□□□□ -1.33
HIF1A-202ENST00000337138 A0A0J9YWU9 116 aa6.76□□□□□ -1.33
HIF1A-202ENST00000337138 Q6ZRU5 148 aa6.76□□□□□ -1.33
HIF1A-202ENST00000337138 KPRPQ5T749 579 aaPredicted RBP6.76□□□□□ -1.33
HIF1A-202ENST00000337138 HECTD4Q9Y4D8 3996 aa6.75□□□□□ -1.33
HIF1A-202ENST00000337138 H3BQ85 93 aa6.75□□□□□ -1.33
HIF1A-202ENST00000337138 Q6ZTC4 211 aa6.75□□□□□ -1.33
HIF1A-202ENST00000337138 FP248Q71RG6 208 aaPredicted RBP6.75□□□□□ -1.33
HIF1A-202ENST00000337138 SMIM29Q86T20 159 aa6.75□□□□□ -1.33
HIF1A-202ENST00000337138 MRPL55Q7Z7F7 128 aaKnown RBP6.75□□□□□ -1.33
HIF1A-202ENST00000337138 CHKB-CPT1BH3BT56 60 aa6.74□□□□□ -1.33
HIF1A-202ENST00000337138 Q8NAQ8 132 aa6.74□□□□□ -1.33
HIF1A-202ENST00000337138 A0A096LNI7 61 aa6.73□□□□□ -1.33
HIF1A-202ENST00000337138 TENM3Q9P273 2699 aa6.72□□□□□ -1.33
HIF1A-202ENST00000337138 LOC110117498A0A087WWA1 95 aa6.72□□□□□ -1.33
HIF1A-202ENST00000337138 IGLV6-57P01721 117 aa6.72□□□□□ -1.33
HIF1A-202ENST00000337138 LINC00208Q96KT6 92 aa6.71□□□□□ -1.34
HIF1A-202ENST00000337138 FAM229BQ4G0N7 80 aa6.7□□□□□ -1.34
HIF1A-202ENST00000337138 M0R378 163 aa6.7□□□□□ -1.34
HIF1A-202ENST00000337138 A6NED7 52 aa6.69□□□□□ -1.34
HIF1A-202ENST00000337138 KRTAP26-1Q6PEX3 210 aa6.69□□□□□ -1.34
HIF1A-202ENST00000337138 BCE1O60756 84 aa6.69□□□□□ -1.34
HIF1A-202ENST00000337138 C1orf137Q5JT78 98 aa6.69□□□□□ -1.34
HIF1A-202ENST00000337138 COL7A1Q02388 2944 aa6.68□□□□□ -1.34
HIF1A-202ENST00000337138 Q6ZRP5 223 aa6.68□□□□□ -1.34
HIF1A-202ENST00000337138 SYCNQ0VAF6 134 aa6.68□□□□□ -1.34
HIF1A-202ENST00000337138 A0A0G2JQZ4 141 aa6.68□□□□□ -1.34
HIF1A-202ENST00000337138 A0A1W2PNN7 141 aa6.68□□□□□ -1.34
HIF1A-202ENST00000337138 PRR15LQ9BU68 103 aa6.68□□□□□ -1.34
HIF1A-202ENST00000337138 NDUFS5O43920 106 aa6.67□□□□□ -1.34
HIF1A-202ENST00000337138 PRR34Q9NV39 138 aa6.67□□□□□ -1.34
HIF1A-202ENST00000337138 DEFB131BA0A096LNP1 70 aa6.67□□□□□ -1.34
HIF1A-202ENST00000337138 VPREB1P12018 145 aa6.67□□□□□ -1.34
HIF1A-202ENST00000337138 FRAS1Q86XX4 4008 aa6.67□□□□□ -1.34
HIF1A-202ENST00000337138 FAM168BA1KXE4 195 aa6.66□□□□□ -1.34
HIF1A-202ENST00000337138 A8MUN3 132 aa6.66□□□□□ -1.34
HIF1A-202ENST00000337138 F8WDY8 70 aa6.66□□□□□ -1.34
HIF1A-202ENST00000337138 H0Y9J4 135 aa6.66□□□□□ -1.34
HIF1A-202ENST00000337138 ELOF1P60002 83 aaKnown RBP6.66□□□□□ -1.34
HIF1A-202ENST00000337138 IGKV2-24A0A0C4DH68 120 aa6.65□□□□□ -1.34
HIF1A-202ENST00000337138 TRBV7-4A0A0J9YYF1 115 aa6.65□□□□□ -1.34
HIF1A-202ENST00000337138 EGFEM1PQ0D2K5 195 aa6.65□□□□□ -1.34
HIF1A-202ENST00000337138 SERTAD4-AS1Q5TG53 156 aa6.65□□□□□ -1.34
HIF1A-202ENST00000337138 ST20-AS1Q8NBB2 130 aa6.65□□□□□ -1.35
HIF1A-202ENST00000337138 C11orf45Q8TAV5 145 aa6.65□□□□□ -1.35
HIF1A-202ENST00000337138 PLECQ15149 4684 aaKnown RBP6.64□□□□□ -1.35
HIF1A-202ENST00000337138 VPS13DQ5THJ4 4388 aa6.64□□□□□ -1.35
HIF1A-202ENST00000337138 C1orf64Q8NEQ6 169 aa6.64□□□□□ -1.35
HIF1A-202ENST00000337138 C15orf56Q8N910 161 aa6.63□□□□□ -1.35
HIF1A-202ENST00000337138 C7orf33Q8WU49 177 aa6.63□□□□□ -1.35
HIF1A-202ENST00000337138 IGKV4-1P06312 121 aa6.63□□□□□ -1.35
HIF1A-202ENST00000337138 DNAH2Q9P225 4427 aa6.63□□□□□ -1.35
HIF1A-202ENST00000337138 EPM2AB3EWF7 344 aa6.62□□□□□ -1.35
HIF1A-202ENST00000337138 GVQW2A0A096LPI5 108 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms