RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 REG3AQ06141 175 aa12.21□□□□□ -0.45
PKP3-201ENST00000331563 SPAG11BQ08648 103 aa12.21□□□□□ -0.45
PKP3-201ENST00000331563 HIGD2AQ9BW72 106 aa12.21□□□□□ -0.46
PKP3-201ENST00000331563 XAGE1AQ9HD64 81 aa12.2□□□□□ -0.46
PKP3-201ENST00000331563 COX7BP24311 80 aa12.19□□□□□ -0.46
PKP3-201ENST00000331563 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.19□□□□□ -0.46
PKP3-201ENST00000331563 NOTCH1P46531 2555 aa12.19□□□□□ -0.46
PKP3-201ENST00000331563 PSPHP1O15172 72 aa12.19□□□□□ -0.46
PKP3-201ENST00000331563 CSNK1G2-AS1Q8NCQ2 148 aa12.19□□□□□ -0.46
PKP3-201ENST00000331563 ANK2Q01484 3957 aa12.18□□□□□ -0.46
PKP3-201ENST00000331563 CYSRT1A8MQ03 144 aa12.18□□□□□ -0.46
PKP3-201ENST00000331563 ZNF73O43830 326 aaPredicted RBP12.17□□□□□ -0.46
PKP3-201ENST00000331563 CMC4P56277 68 aaPredicted RBP12.17□□□□□ -0.46
PKP3-201ENST00000331563 MRPL55Q7Z7F7 128 aaKnown RBP12.17□□□□□ -0.46
PKP3-201ENST00000331563 PRO0255Q9UI72 69 aa12.16□□□□□ -0.46
PKP3-201ENST00000331563 IGKV4-1P06312 121 aa12.15□□□□□ -0.46
PKP3-201ENST00000331563 DEFB4AO15263 64 aa12.14□□□□□ -0.47
PKP3-201ENST00000331563 C1orf64Q8NEQ6 169 aa12.14□□□□□ -0.47
PKP3-201ENST00000331563 C3orf84H3BNL1 204 aa12.14□□□□□ -0.47
PKP3-201ENST00000331563 TRAV22A0A0B4J277 110 aa12.13□□□□□ -0.47
PKP3-201ENST00000331563 CELA1Q9UNI1 258 aa12.12□□□□□ -0.47
PKP3-201ENST00000331563 HIGD2BQ4VC39 106 aa12.1□□□□□ -0.47
PKP3-201ENST00000331563 FAM30AQ9NZY2 134 aa12.1□□□□□ -0.47
PKP3-201ENST00000331563 ELOF1P60002 83 aaKnown RBP12.09□□□□□ -0.47
PKP3-201ENST00000331563 KLK12Q9UKR0 248 aa12.09□□□□□ -0.47
PKP3-201ENST00000331563 A0A0J9YWU9 116 aa12.09□□□□□ -0.47
PKP3-201ENST00000331563 IGHV4-30-4P0DP06 118 aa12.09□□□□□ -0.47
PKP3-201ENST00000331563 DEFB135Q30KP9 77 aa12.08□□□□□ -0.48
PKP3-201ENST00000331563 RBM12B-AS1Q9P1G2 102 aa12.06□□□□□ -0.48
PKP3-201ENST00000331563 DEFB105AQ8NG35 78 aa12.05□□□□□ -0.48
PKP3-201ENST00000331563 KTN1-AS1Q86SY8 53 aa12.05□□□□□ -0.48
PKP3-201ENST00000331563 SMIM29Q86T20 159 aa12.05□□□□□ -0.48
PKP3-201ENST00000331563 NBEAL1Q6ZS30 2694 aa12.04□□□□□ -0.48
PKP3-201ENST00000331563 SYCNQ0VAF6 134 aa12.04□□□□□ -0.48
PKP3-201ENST00000331563 A8MU10 97 aa12.04□□□□□ -0.48
PKP3-201ENST00000331563 OXLD1Q5BKU9 147 aa12.04□□□□□ -0.48
PKP3-201ENST00000331563 C6orf48Q9UBA6 75 aa12.04□□□□□ -0.48
PKP3-201ENST00000331563 TENM3Q9P273 2699 aa12.03□□□□□ -0.48
PKP3-201ENST00000331563 A8MUN3 132 aa12.02□□□□□ -0.48
PKP3-201ENST00000331563 X6R8D5 127 aa12.02□□□□□ -0.48
PKP3-201ENST00000331563 UBE2BP63146 152 aa12.01□□□□□ -0.49
PKP3-201ENST00000331563 LINC00612Q8N6U2 182 aa12.01□□□□□ -0.49
PKP3-201ENST00000331563 CMYA5Q8N3K9 4069 aa12□□□□□ -0.49
PKP3-201ENST00000331563 LYRM9A8MSI8 78 aa12□□□□□ -0.49
PKP3-201ENST00000331563 KRTAP24-1Q3LI83 254 aa12□□□□□ -0.49
PKP3-201ENST00000331563 LINC00588Q9Y4M8 146 aa12□□□□□ -0.49
PKP3-201ENST00000331563 LCE6AA0A183 80 aa11.98□□□□□ -0.49
PKP3-201ENST00000331563 PSCAO43653 123 aa11.98□□□□□ -0.49
PKP3-201ENST00000331563 PRB2P02812 416 aaPredicted RBP11.98□□□□□ -0.49
PKP3-201ENST00000331563 HTN3P15516 51 aa11.98□□□□□ -0.49
PKP3-201ENST00000331563 PRR4Q16378 134 aa11.98□□□□□ -0.49
PKP3-201ENST00000331563 LINC00528Q8N1L1 170 aa11.97□□□□□ -0.49
PKP3-201ENST00000331563 M0R378 163 aa11.96□□□□□ -0.49
PKP3-201ENST00000331563 CAMK2N2Q96S95 79 aa11.96□□□□□ -0.49
PKP3-201ENST00000331563 GVQW2A0A096LPI5 108 aaPredicted RBP11.96□□□□□ -0.5
PKP3-201ENST00000331563 VPREB1P12018 145 aa11.96□□□□□ -0.5
PKP3-201ENST00000331563 Q5VV11 94 aa11.95□□□□□ -0.5
PKP3-201ENST00000331563 MGAM2Q2M2H8 2515 aa11.95□□□□□ -0.5
PKP3-201ENST00000331563 ZCCHC13Q8WW36 166 aaKnown RBP11.94□□□□□ -0.5
PKP3-201ENST00000331563 CYP4F30PQ9H0H9 118 aa11.94□□□□□ -0.5
PKP3-201ENST00000331563 KPRPQ5T749 579 aaPredicted RBP11.92□□□□□ -0.5
PKP3-201ENST00000331563 UBE2AP49459 152 aa11.91□□□□□ -0.5
PKP3-201ENST00000331563 KRTAP10-11P60412 298 aa11.9□□□□□ -0.5
PKP3-201ENST00000331563 C16orf90A8MZG2 172 aa11.9□□□□□ -0.5
PKP3-201ENST00000331563 CHKB-CPT1BH3BT56 60 aa11.88□□□□□ -0.51
PKP3-201ENST00000331563 C4orf48Q5BLP8 95 aa11.88□□□□□ -0.51
PKP3-201ENST00000331563 LELP1Q5T871 98 aa11.88□□□□□ -0.51
PKP3-201ENST00000331563 APOC4P55056 127 aa11.88□□□□□ -0.51
PKP3-201ENST00000331563 SPTSSBQ8NFR3 76 aa11.88□□□□□ -0.51
PKP3-201ENST00000331563 ETDCA0A1B0GVM5 59 aa11.87□□□□□ -0.51
PKP3-201ENST00000331563 PRR34Q9NV39 138 aa11.87□□□□□ -0.51
PKP3-201ENST00000331563 Q8N377 158 aa11.87□□□□□ -0.51
PKP3-201ENST00000331563 NDUFS5O43920 106 aa11.86□□□□□ -0.51
PKP3-201ENST00000331563 Q8NAQ8 132 aa11.85□□□□□ -0.51
PKP3-201ENST00000331563 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.85□□□□□ -0.51
PKP3-201ENST00000331563 EGFEM1PQ0D2K5 195 aa11.84□□□□□ -0.51
PKP3-201ENST00000331563 ATP11AUNQ6ZP68 121 aa11.83□□□□□ -0.52
PKP3-201ENST00000331563 A0A1W2PNM2 257 aa11.82□□□□□ -0.52
PKP3-201ENST00000331563 HCG22E2RYF7 251 aa11.82□□□□□ -0.52
PKP3-201ENST00000331563 C1orf137Q5JT78 98 aa11.82□□□□□ -0.52
PKP3-201ENST00000331563 PHF5AQ7RTV0 110 aaKnown RBP11.82□□□□□ -0.52
PKP3-201ENST00000331563 NKAPP1Q8N9T2 125 aa11.82□□□□□ -0.52
PKP3-201ENST00000331563 IGLV5-48A0A075B6I7 105 aa11.82□□□□□ -0.52
PKP3-201ENST00000331563 K7EQZ3 153 aa11.82□□□□□ -0.52
PKP3-201ENST00000331563 ST20-AS1Q8NBB2 130 aa11.82□□□□□ -0.52
PKP3-201ENST00000331563 C11orf45Q8TAV5 145 aa11.82□□□□□ -0.52
PKP3-201ENST00000331563 LIMD2Q9BT23 127 aa11.8□□□□□ -0.52
PKP3-201ENST00000331563 NDUFB1O75438 58 aa11.79□□□□□ -0.52
PKP3-201ENST00000331563 Q8N9P0 234 aaPredicted RBP11.78□□□□□ -0.52
PKP3-201ENST00000331563 A6NN06 94 aa11.78□□□□□ -0.52
PKP3-201ENST00000331563 DSCR10P59022 87 aa11.78□□□□□ -0.52
PKP3-201ENST00000331563 LCA10Q71F78 164 aa11.77□□□□□ -0.53
PKP3-201ENST00000331563 PRR15LQ9BU68 103 aa11.76□□□□□ -0.53
PKP3-201ENST00000331563 SPART-AS1P0CW21 52 aa11.76□□□□□ -0.53
PKP3-201ENST00000331563 Q8NBF4 154 aa11.76□□□□□ -0.53
PKP3-201ENST00000331563 B9D2Q9BPU9 175 aa11.76□□□□□ -0.53
PKP3-201ENST00000331563 DEFB116Q30KQ4 102 aa11.74□□□□□ -0.53
PKP3-201ENST00000331563 A0A1B0GW54 56 aa11.74□□□□□ -0.53
PKP3-201ENST00000331563 RPL37AP8A6NKH3 93 aa11.74□□□□□ -0.53
PKP3-201ENST00000331563 KCNQ1DNQ9H478 68 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms