RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 VWFP04275 2813 aa12.03□□□□□ -0.48
SOCS3-201ENST00000330871 RETNQ9HD89 108 aa12.02□□□□□ -0.49
SOCS3-201ENST00000330871 VPREB1P12018 145 aa12.02□□□□□ -0.49
SOCS3-201ENST00000330871 LCE6AA0A183 80 aa12.01□□□□□ -0.49
SOCS3-201ENST00000330871 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.01□□□□□ -0.49
SOCS3-201ENST00000330871 ZCCHC13Q8WW36 166 aaKnown RBP12.01□□□□□ -0.49
SOCS3-201ENST00000330871 ST20-AS1Q8NBB2 130 aa12□□□□□ -0.49
SOCS3-201ENST00000330871 FLNAP21333 2647 aaKnown RBP12□□□□□ -0.49
SOCS3-201ENST00000330871 PSCAO43653 123 aa11.98□□□□□ -0.49
SOCS3-201ENST00000330871 KPRPQ5T749 579 aaPredicted RBP11.98□□□□□ -0.49
SOCS3-201ENST00000330871 SYCNQ0VAF6 134 aa11.97□□□□□ -0.49
SOCS3-201ENST00000330871 HIVEP2P31629 2446 aa11.97□□□□□ -0.49
SOCS3-201ENST00000330871 GVQW2A0A096LPI5 108 aaPredicted RBP11.96□□□□□ -0.49
SOCS3-201ENST00000330871 ETDCA0A1B0GVM5 59 aa11.96□□□□□ -0.49
SOCS3-201ENST00000330871 KRTAP1-1Q07627 177 aa11.96□□□□□ -0.49
SOCS3-201ENST00000330871 M0R378 163 aa11.96□□□□□ -0.49
SOCS3-201ENST00000330871 Q8N377 158 aa11.96□□□□□ -0.49
SOCS3-201ENST00000330871 CD164Q04900 197 aa11.95□□□□□ -0.5
SOCS3-201ENST00000330871 A0A1W2PNM2 257 aa11.95□□□□□ -0.5
SOCS3-201ENST00000330871 K7EQZ3 153 aa11.95□□□□□ -0.5
SOCS3-201ENST00000330871 DEFB135Q30KP9 77 aa11.93□□□□□ -0.5
SOCS3-201ENST00000330871 CAMK2N2Q96S95 79 aa11.93□□□□□ -0.5
SOCS3-201ENST00000330871 LELP1Q5T871 98 aa11.92□□□□□ -0.5
SOCS3-201ENST00000330871 DSCR10P59022 87 aa11.92□□□□□ -0.5
SOCS3-201ENST00000330871 Q5VV11 94 aa11.92□□□□□ -0.5
SOCS3-201ENST00000330871 PRR34Q9NV39 138 aa11.91□□□□□ -0.5
SOCS3-201ENST00000330871 HTN3P15516 51 aa11.91□□□□□ -0.5
SOCS3-201ENST00000330871 CYP4F30PQ9H0H9 118 aa11.91□□□□□ -0.5
SOCS3-201ENST00000330871 KRTAP10-3P60369 221 aa11.9□□□□□ -0.5
SOCS3-201ENST00000330871 IGLV5-48A0A075B6I7 105 aa11.89□□□□□ -0.51
SOCS3-201ENST00000330871 DEFB116Q30KQ4 102 aa11.89□□□□□ -0.51
SOCS3-201ENST00000330871 KMT2BQ9UMN6 2715 aaPredicted RBP11.87□□□□□ -0.51
SOCS3-201ENST00000330871 CHKB-CPT1BH3BT56 60 aa11.87□□□□□ -0.51
SOCS3-201ENST00000330871 HELZ2Q9BYK8 2649 aaKnown RBP11.87□□□□□ -0.51
SOCS3-201ENST00000330871 APOC4P55056 127 aa11.87□□□□□ -0.51
SOCS3-201ENST00000330871 C1orf137Q5JT78 98 aa11.87□□□□□ -0.51
SOCS3-201ENST00000330871 SPTSSBQ8NFR3 76 aa11.87□□□□□ -0.51
SOCS3-201ENST00000330871 TENM4Q6N022 2769 aa11.85□□□□□ -0.51
SOCS3-201ENST00000330871 ANK3Q12955 4377 aaKnown RBP11.85□□□□□ -0.51
SOCS3-201ENST00000330871 UNC79Q9P2D8 2635 aa11.85□□□□□ -0.51
SOCS3-201ENST00000330871 PKD1L1Q8TDX9 2849 aa11.85□□□□□ -0.51
SOCS3-201ENST00000330871 PDZD2O15018 2839 aa11.84□□□□□ -0.51
SOCS3-201ENST00000330871 FASNP49327 2511 aaKnown RBP11.84□□□□□ -0.51
SOCS3-201ENST00000330871 C16orf90A8MZG2 172 aa11.84□□□□□ -0.51
SOCS3-201ENST00000330871 UBE2BP63146 152 aa11.84□□□□□ -0.51
SOCS3-201ENST00000330871 MRPL55Q7Z7F7 128 aaKnown RBP11.84□□□□□ -0.51
SOCS3-201ENST00000330871 SPART-AS1P0CW21 52 aa11.83□□□□□ -0.52
SOCS3-201ENST00000330871 Q8NAQ8 132 aa11.83□□□□□ -0.52
SOCS3-201ENST00000330871 HCG22E2RYF7 251 aa11.82□□□□□ -0.52
SOCS3-201ENST00000330871 EGFEM1PQ0D2K5 195 aa11.82□□□□□ -0.52
SOCS3-201ENST00000330871 WFDC13Q8IUB5 93 aa11.82□□□□□ -0.52
SOCS3-201ENST00000330871 Q8NBF4 154 aa11.82□□□□□ -0.52
SOCS3-201ENST00000330871 B9D2Q9BPU9 175 aa11.82□□□□□ -0.52
SOCS3-201ENST00000330871 LINC00588Q9Y4M8 146 aa11.82□□□□□ -0.52
SOCS3-201ENST00000330871 PRR15LQ9BU68 103 aa11.8□□□□□ -0.52
SOCS3-201ENST00000330871 RBM12B-AS1Q9P1G2 102 aa11.8□□□□□ -0.52
SOCS3-201ENST00000330871 A0A0G2JQZ4 141 aa11.8□□□□□ -0.52
SOCS3-201ENST00000330871 A0A1W2PNN7 141 aa11.8□□□□□ -0.52
SOCS3-201ENST00000330871 LINC00208Q96KT6 92 aa11.8□□□□□ -0.52
SOCS3-201ENST00000330871 KTN1-AS1Q86SY8 53 aa11.79□□□□□ -0.52
SOCS3-201ENST00000330871 J3QKU1 62 aa11.79□□□□□ -0.52
SOCS3-201ENST00000330871 UBE2AP49459 152 aa11.79□□□□□ -0.52
SOCS3-201ENST00000330871 Q8N9P0 234 aaPredicted RBP11.79□□□□□ -0.52
SOCS3-201ENST00000330871 RPL37AP8A6NKH3 93 aa11.78□□□□□ -0.52
SOCS3-201ENST00000330871 NDUFB1O75438 58 aa11.78□□□□□ -0.52
SOCS3-201ENST00000330871 SERTAD4-AS1Q5TG53 156 aa11.78□□□□□ -0.52
SOCS3-201ENST00000330871 NKAPP1Q8N9T2 125 aa11.77□□□□□ -0.52
SOCS3-201ENST00000330871 C7orf33Q8WU49 177 aa11.77□□□□□ -0.53
SOCS3-201ENST00000330871 TNP2Q05952 138 aa11.76□□□□□ -0.53
SOCS3-201ENST00000330871 Q9BRP9 147 aa11.76□□□□□ -0.53
SOCS3-201ENST00000330871 KCNQ1DNQ9H478 68 aa11.76□□□□□ -0.53
SOCS3-201ENST00000330871 WFDC10BQ8IUB3 73 aa11.76□□□□□ -0.53
SOCS3-201ENST00000330871 F8P00451 2351 aa11.76□□□□□ -0.53
SOCS3-201ENST00000330871 MP68P56378 58 aa11.75□□□□□ -0.53
SOCS3-201ENST00000330871 C15orf56Q8N910 161 aa11.75□□□□□ -0.53
SOCS3-201ENST00000330871 NOTCH2Q04721 2471 aa11.75□□□□□ -0.53
SOCS3-201ENST00000330871 LCA10Q71F78 164 aa11.74□□□□□ -0.53
SOCS3-201ENST00000330871 SPRR4Q96PI1 79 aa11.74□□□□□ -0.53
SOCS3-201ENST00000330871 ITPR2Q14571 2701 aa11.73□□□□□ -0.53
SOCS3-201ENST00000330871 A0A1B0GW54 56 aa11.73□□□□□ -0.53
SOCS3-201ENST00000330871 TENM1Q9UKZ4 2725 aa11.73□□□□□ -0.53
SOCS3-201ENST00000330871 HECTD1Q9ULT8 2610 aa11.73□□□□□ -0.53
SOCS3-201ENST00000330871 TRRAPQ9Y4A5 3859 aa11.72□□□□□ -0.53
SOCS3-201ENST00000330871 Q6ZRX8 168 aa11.71□□□□□ -0.53
SOCS3-201ENST00000330871 HIVEP1P15822 2718 aa11.71□□□□□ -0.53
SOCS3-201ENST00000330871 TEP1Q99973 2627 aaKnown RBP11.71□□□□□ -0.54
SOCS3-201ENST00000330871 LIMD2Q9BT23 127 aa11.7□□□□□ -0.54
SOCS3-201ENST00000330871 KRTAP26-1Q6PEX3 210 aa11.7□□□□□ -0.54
SOCS3-201ENST00000330871 A6NED7 52 aa11.69□□□□□ -0.54
SOCS3-201ENST00000330871 SMR3AQ99954 134 aa11.69□□□□□ -0.54
SOCS3-201ENST00000330871 DHRS4-AS1Q9P1J3 65 aa11.69□□□□□ -0.54
SOCS3-201ENST00000330871 RPL37AP61513 92 aaKnown RBP11.68□□□□□ -0.54
SOCS3-201ENST00000330871 FAM168BA1KXE4 195 aa11.66□□□□□ -0.54
SOCS3-201ENST00000330871 BAHCC1Q9P281 2608 aa11.66□□□□□ -0.54
SOCS3-201ENST00000330871 H0Y9P7 68 aa11.65□□□□□ -0.54
SOCS3-201ENST00000330871 ATP11AUNQ6ZP68 121 aa11.64□□□□□ -0.55
SOCS3-201ENST00000330871 LINC00476Q8WZB0 136 aa11.64□□□□□ -0.55
SOCS3-201ENST00000330871 OTOGQ6ZRI0 2925 aa11.63□□□□□ -0.55
SOCS3-201ENST00000330871 KRTAP4-16G5E9R7 235 aaPredicted RBP11.63□□□□□ -0.55
SOCS3-201ENST00000330871 H3BNG1 76 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 1531.4 ms