RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 A0A087WTM6 91 aa6.03□□□□□ -1.44
CD28-201ENST00000324106 SPINK1P00995 79 aa6.02□□□□□ -1.44
CD28-201ENST00000324106 KRTAP1-1Q07627 177 aa6.02□□□□□ -1.45
CD28-201ENST00000324106 LINC00313P59037 77 aa6.02□□□□□ -1.45
CD28-201ENST00000324106 LAMA5O15230 3695 aa6.02□□□□□ -1.45
CD28-201ENST00000324106 TRBV7-7A0A0K0K1E9 115 aa6.01□□□□□ -1.45
CD28-201ENST00000324106 SSBP3-AS1Q7Z2R9 100 aa6.01□□□□□ -1.45
CD28-201ENST00000324106 Q9UF83 564 aa6.01□□□□□ -1.45
CD28-201ENST00000324106 DCHS1Q96JQ0 3298 aa6.01□□□□□ -1.45
CD28-201ENST00000324106 C9orf163Q8N9P6 203 aa6.01□□□□□ -1.45
CD28-201ENST00000324106 LINC00476Q8WZB0 136 aa6.01□□□□□ -1.45
CD28-201ENST00000324106 PRR34Q9NV39 138 aa6.01□□□□□ -1.45
CD28-201ENST00000324106 C8orf87E5RJ46 101 aa6.01□□□□□ -1.45
CD28-201ENST00000324106 LINC00612Q8N6U2 182 aa6.01□□□□□ -1.45
CD28-201ENST00000324106 KRTAP10-3P60369 221 aa6□□□□□ -1.45
CD28-201ENST00000324106 CDIP1Q9H305 208 aa6□□□□□ -1.45
CD28-201ENST00000324106 C1orf64Q8NEQ6 169 aa5.99□□□□□ -1.45
CD28-201ENST00000324106 VPREB1P12018 145 aa5.99□□□□□ -1.45
CD28-201ENST00000324106 ZNF861PO60384 105 aa5.98□□□□□ -1.45
CD28-201ENST00000324106 COX6B2Q6YFQ2 88 aa5.98□□□□□ -1.45
CD28-201ENST00000324106 LINC00846Q9NV44 126 aa5.98□□□□□ -1.45
CD28-201ENST00000324106 CENPEQ02224 2701 aa5.98□□□□□ -1.45
CD28-201ENST00000324106 SMIM26A0A096LP01 95 aa5.98□□□□□ -1.45
CD28-201ENST00000324106 LINC00304Q8N9R0 145 aa5.98□□□□□ -1.45
CD28-201ENST00000324106 CFAP47Q6ZTR5 3102 aa5.98□□□□□ -1.45
CD28-201ENST00000324106 A0A087WVE0 104 aa5.98□□□□□ -1.45
CD28-201ENST00000324106 TEP1Q99973 2627 aaKnown RBP5.98□□□□□ -1.45
CD28-201ENST00000324106 TMEM254Q8TBM7 123 aa5.97□□□□□ -1.45
CD28-201ENST00000324106 APLNQ9ULZ1 77 aa5.97□□□□□ -1.45
CD28-201ENST00000324106 C7orf65Q6ZTY9 151 aa5.97□□□□□ -1.45
CD28-201ENST00000324106 H3BPC8 53 aa5.97□□□□□ -1.45
CD28-201ENST00000324106 BPTFQ12830 3046 aa5.97□□□□□ -1.45
CD28-201ENST00000324106 ST20-AS1Q8NBB2 130 aa5.96□□□□□ -1.45
CD28-201ENST00000324106 TRBV7-4A0A0J9YYF1 115 aa5.96□□□□□ -1.46
CD28-201ENST00000324106 GIG44P09565 113 aaPredicted RBP5.96□□□□□ -1.46
CD28-201ENST00000324106 SPENQ96T58 3664 aaKnown RBP5.96□□□□□ -1.46
CD28-201ENST00000324106 SOSTDC1Q6X4U4 206 aa5.96□□□□□ -1.46
CD28-201ENST00000324106 KCNQ1DNQ9H478 68 aa5.96□□□□□ -1.46
CD28-201ENST00000324106 IGLV1-50A0A075B6I6 118 aa5.95□□□□□ -1.46
CD28-201ENST00000324106 ZNF575Q86XF7 245 aa5.95□□□□□ -1.46
CD28-201ENST00000324106 IGLV6-57P01721 117 aa5.95□□□□□ -1.46
CD28-201ENST00000324106 Q96NJ1 140 aa5.95□□□□□ -1.46
CD28-201ENST00000324106 TLX1NBP0CAT3 122 aa5.94□□□□□ -1.46
CD28-201ENST00000324106 ACYP2P14621 99 aa5.94□□□□□ -1.46
CD28-201ENST00000324106 LOC110117498A0A087WWA1 95 aa5.94□□□□□ -1.46
CD28-201ENST00000324106 CNBPP62633 177 aaKnown RBP5.92□□□□□ -1.46
CD28-201ENST00000324106 SMR3BP02814 79 aaPredicted RBP5.92□□□□□ -1.46
CD28-201ENST00000324106 PLA2G2DQ9UNK4 145 aa5.92□□□□□ -1.46
CD28-201ENST00000324106 TRAV22A0A0B4J277 110 aa5.92□□□□□ -1.46
CD28-201ENST00000324106 WIPF1O43516 503 aa5.92□□□□□ -1.46
CD28-201ENST00000324106 C15orf56Q8N910 161 aa5.92□□□□□ -1.46
CD28-201ENST00000324106 SMIM29Q86T20 159 aa5.91□□□□□ -1.46
CD28-201ENST00000324106 COL6A5A8TX70 2615 aa5.91□□□□□ -1.46
CD28-201ENST00000324106 SERTAD4-AS1Q5TG53 156 aa5.91□□□□□ -1.46
CD28-201ENST00000324106 FREM2Q5SZK8 3169 aa5.9□□□□□ -1.46
CD28-201ENST00000324106 LOC101927531A0A1B0GV80 90 aa5.9□□□□□ -1.46
CD28-201ENST00000324106 IGLV7-43P04211 117 aa5.9□□□□□ -1.46
CD28-201ENST00000324106 Q6ZQT0 140 aa5.9□□□□□ -1.46
CD28-201ENST00000324106 FAM168BA1KXE4 195 aa5.9□□□□□ -1.47
CD28-201ENST00000324106 LINC00528Q8N1L1 170 aa5.9□□□□□ -1.47
CD28-201ENST00000324106 BAHCC1Q9P281 2608 aa5.9□□□□□ -1.47
CD28-201ENST00000324106 A8MWP4 228 aa5.89□□□□□ -1.47
CD28-201ENST00000324106 CSMD2Q7Z408 3487 aa5.89□□□□□ -1.47
CD28-201ENST00000324106 FAM218AQ96MZ4 157 aa5.87□□□□□ -1.47
CD28-201ENST00000324106 MRPL34Q9BQ48 92 aaKnown RBP5.87□□□□□ -1.47
CD28-201ENST00000324106 CCDC179H3BU77 68 aa5.87□□□□□ -1.47
CD28-201ENST00000324106 CASC10Q5T4H9 136 aa5.87□□□□□ -1.47
CD28-201ENST00000324106 A0A1B0GU69 56 aa5.86□□□□□ -1.47
CD28-201ENST00000324106 PSORS1C2Q9UIG4 136 aa5.86□□□□□ -1.47
CD28-201ENST00000324106 TEX15Q9BXT5 2789 aa5.85□□□□□ -1.47
CD28-201ENST00000324106 RBM12B-AS1Q9P1G2 102 aa5.84□□□□□ -1.47
CD28-201ENST00000324106 LITAFQ99732 161 aa5.83□□□□□ -1.48
CD28-201ENST00000324106 C9orf129Q5T035 196 aaKnown RBP5.83□□□□□ -1.48
CD28-201ENST00000324106 TNP2Q05952 138 aa5.83□□□□□ -1.48
CD28-201ENST00000324106 UNC79Q9P2D8 2635 aa5.83□□□□□ -1.48
CD28-201ENST00000324106 ZNF292O60281 2723 aa5.82□□□□□ -1.48
CD28-201ENST00000324106 TRANK1O15050 2925 aa5.82□□□□□ -1.48
CD28-201ENST00000324106 A0A0U1RQV1 116 aa5.82□□□□□ -1.48
CD28-201ENST00000324106 IGFL1Q6UW32 110 aa5.82□□□□□ -1.48
CD28-201ENST00000324106 SPRR4Q96PI1 79 aa5.82□□□□□ -1.48
CD28-201ENST00000324106 AKAP13Q12802 2813 aa5.81□□□□□ -1.48
CD28-201ENST00000324106 NOTCH1P46531 2555 aa5.8□□□□□ -1.48
CD28-201ENST00000324106 A0A1B0GVX0 72 aa5.8□□□□□ -1.48
CD28-201ENST00000324106 C8orf17Q9NRJ1 99 aa5.8□□□□□ -1.48
CD28-201ENST00000324106 RELNP78509 3460 aa5.8□□□□□ -1.48
CD28-201ENST00000324106 CHD7Q9P2D1 2997 aa5.79□□□□□ -1.48
CD28-201ENST00000324106 NBEAL1Q6ZS30 2694 aa5.79□□□□□ -1.48
CD28-201ENST00000324106 A0A1W2PNN7 141 aa5.79□□□□□ -1.48
CD28-201ENST00000324106 OBSCN-AS1Q96MR7 158 aa5.79□□□□□ -1.48
CD28-201ENST00000324106 PRR15Q8IV56 129 aa5.79□□□□□ -1.48
CD28-201ENST00000324106 KRTAP21-3Q3LHN1 58 aa5.79□□□□□ -1.48
CD28-201ENST00000324106 BOD1L1Q8NFC6 3051 aa5.78□□□□□ -1.48
CD28-201ENST00000324106 IGLV5-37A0A075B6J1 123 aa5.78□□□□□ -1.48
CD28-201ENST00000324106 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
CD28-201ENST00000324106 Q8N377 158 aa5.77□□□□□ -1.49
CD28-201ENST00000324106 PSPHP1O15172 72 aa5.77□□□□□ -1.49
CD28-201ENST00000324106 DSCR10P59022 87 aa5.77□□□□□ -1.49
CD28-201ENST00000324106 KMT2BQ9UMN6 2715 aaPredicted RBP5.77□□□□□ -1.49
CD28-201ENST00000324106 C9orf92A6NGG3 77 aa5.77□□□□□ -1.49
CD28-201ENST00000324106 K7EQZ3 153 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms