RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 HINT1P49773 126 aaPredicted RBP13.06□□□□□ -0.32
YBX1-201ENST00000321358 BVES-AS1Q5T3Y7 98 aa13.06□□□□□ -0.32
YBX1-201ENST00000321358 NHP2Q9NX24 153 aaKnown RBP13.06□□□□□ -0.32
YBX1-201ENST00000321358 ABCA13Q86UQ4 5058 aa13.05□□□□□ -0.32
YBX1-201ENST00000321358 RPL13AP40429 203 aaKnown RBP13.05□□□□□ -0.32
YBX1-201ENST00000321358 ETDCA0A1B0GVM5 59 aa13.04□□□□□ -0.32
YBX1-201ENST00000321358 ZNF73O43830 326 aaPredicted RBP13.03□□□□□ -0.32
YBX1-201ENST00000321358 UBE2AP49459 152 aa13.03□□□□□ -0.32
YBX1-201ENST00000321358 PRO1854Q9UHT4 67 aa13.03□□□□□ -0.32
YBX1-201ENST00000321358 FAM19A1Q7Z5A9 133 aa13.03□□□□□ -0.32
YBX1-201ENST00000321358 IGLV7-43P04211 117 aa13.02□□□□□ -0.33
YBX1-201ENST00000321358 DIRC1Q969H9 104 aa13.02□□□□□ -0.33
YBX1-201ENST00000321358 KRTAP4-5Q9BYR2 181 aa13.02□□□□□ -0.33
YBX1-201ENST00000321358 SPRR1AP35321 89 aa13.01□□□□□ -0.33
YBX1-201ENST00000321358 H7C2G1 150 aa13□□□□□ -0.33
YBX1-201ENST00000321358 RPL28P46779 137 aaKnown RBP13□□□□□ -0.33
YBX1-201ENST00000321358 Q1RN00 199 aa12.98□□□□□ -0.33
YBX1-201ENST00000321358 SMIM11BQ8TCY0 68 aa12.98□□□□□ -0.33
YBX1-201ENST00000321358 C6orf99Q4VX62 202 aa12.98□□□□□ -0.33
YBX1-201ENST00000321358 FAT1Q14517 4588 aa12.97□□□□□ -0.33
YBX1-201ENST00000321358 A0A1B0GWB2 263 aa12.97□□□□□ -0.33
YBX1-201ENST00000321358 ZNF861PO60384 105 aa12.97□□□□□ -0.33
YBX1-201ENST00000321358 VAMP3Q15836 100 aa12.97□□□□□ -0.33
YBX1-201ENST00000321358 BATFQ16520 125 aa12.97□□□□□ -0.33
YBX1-201ENST00000321358 VPS13BQ7Z7G8 4022 aa12.97□□□□□ -0.33
YBX1-201ENST00000321358 PCP4L1A6NKN8 68 aa12.95□□□□□ -0.34
YBX1-201ENST00000321358 K7ERJ3 54 aa12.95□□□□□ -0.34
YBX1-201ENST00000321358 KRTAP10-4P60372 401 aaPredicted RBP12.95□□□□□ -0.34
YBX1-201ENST00000321358 PRLHP81277 87 aa12.95□□□□□ -0.34
YBX1-201ENST00000321358 TRBV7-6A0A0J9YX20 115 aa12.94□□□□□ -0.34
YBX1-201ENST00000321358 KRTAP4-16G5E9R7 235 aaPredicted RBP12.94□□□□□ -0.34
YBX1-201ENST00000321358 H0Y9J4 135 aa12.94□□□□□ -0.34
YBX1-201ENST00000321358 B5MCH6 92 aa12.93□□□□□ -0.34
YBX1-201ENST00000321358 COX7BP24311 80 aa12.93□□□□□ -0.34
YBX1-201ENST00000321358 Q6ZRX8 168 aa12.93□□□□□ -0.34
YBX1-201ENST00000321358 SPINK6Q6UWN8 80 aa12.92□□□□□ -0.34
YBX1-201ENST00000321358 SRRM2Q9UQ35 2752 aaKnown RBP12.91□□□□□ -0.34
YBX1-201ENST00000321358 HIGD2AQ9BW72 106 aa12.91□□□□□ -0.34
YBX1-201ENST00000321358 KRTAP13-1Q8IUC0 172 aa12.9□□□□□ -0.34
YBX1-201ENST00000321358 ELOF1P60002 83 aaKnown RBP12.89□□□□□ -0.35
YBX1-201ENST00000321358 PSMB2P49721 201 aa12.88□□□□□ -0.35
YBX1-201ENST00000321358 DHRS4-AS1Q9P1J3 65 aa12.88□□□□□ -0.35
YBX1-201ENST00000321358 SLC25A20O43772 301 aa12.85□□□□□ -0.35
YBX1-201ENST00000321358 TSPAN13O95857 204 aa12.85□□□□□ -0.35
YBX1-201ENST00000321358 COX6CP09669 75 aa12.85□□□□□ -0.35
YBX1-201ENST00000321358 INAFM2P0DMQ5 153 aa12.85□□□□□ -0.35
YBX1-201ENST00000321358 H0YGX0 51 aa12.84□□□□□ -0.35
YBX1-201ENST00000321358 SMCR5Q8TEV8 140 aa12.83□□□□□ -0.35
YBX1-201ENST00000321358 Q9BRP9 147 aa12.83□□□□□ -0.35
YBX1-201ENST00000321358 SNCGO76070 127 aa12.83□□□□□ -0.36
YBX1-201ENST00000321358 TRIAP1O43715 76 aa12.82□□□□□ -0.36
YBX1-201ENST00000321358 SNHG12Q9BXW3 62 aa12.81□□□□□ -0.36
YBX1-201ENST00000321358 SCGB1C2P0DMR2 95 aa12.8□□□□□ -0.36
YBX1-201ENST00000321358 ZNF706Q9Y5V0 76 aaPredicted RBP12.8□□□□□ -0.36
YBX1-201ENST00000321358 LINC00575Q6W349 94 aa12.78□□□□□ -0.36
YBX1-201ENST00000321358 hADV29S1A0JD25 119 aa12.77□□□□□ -0.37
YBX1-201ENST00000321358 ERC2-IT1O76042 136 aa12.77□□□□□ -0.37
YBX1-201ENST00000321358 COL5A1-AS1Q5SY13 56 aa12.77□□□□□ -0.37
YBX1-201ENST00000321358 LYRM7Q5U5X0 104 aa12.72□□□□□ -0.37
YBX1-201ENST00000321358 SPRR4Q96PI1 79 aa12.72□□□□□ -0.37
YBX1-201ENST00000321358 NAA38Q9BRA0 125 aaKnown RBP12.72□□□□□ -0.37
YBX1-201ENST00000321358 A0A1B0GX51 115 aa12.71□□□□□ -0.38
YBX1-201ENST00000321358 C9orf118A6NHY6 69 aa12.7□□□□□ -0.38
YBX1-201ENST00000321358 H3BUT2 72 aa12.7□□□□□ -0.38
YBX1-201ENST00000321358 TAX1BP3O14907 124 aa12.7□□□□□ -0.38
YBX1-201ENST00000321358 GAGE2AQ6NT46 116 aa12.7□□□□□ -0.38
YBX1-201ENST00000321358 CLEC2BQ92478 149 aa12.7□□□□□ -0.38
YBX1-201ENST00000321358 ST20-AS1Q8NBB2 130 aa12.69□□□□□ -0.38
YBX1-201ENST00000321358 FAM218AQ96MZ4 157 aa12.68□□□□□ -0.38
YBX1-201ENST00000321358 DNAL4O96015 105 aa12.67□□□□□ -0.38
YBX1-201ENST00000321358 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.67□□□□□ -0.38
YBX1-201ENST00000321358 DEFB105AQ8NG35 78 aa12.67□□□□□ -0.38
YBX1-201ENST00000321358 Q6ZQY7 126 aa12.67□□□□□ -0.38
YBX1-201ENST00000321358 GHRHP01286 108 aa12.65□□□□□ -0.38
YBX1-201ENST00000321358 KRTAP1-4P0C5Y4 121 aa12.65□□□□□ -0.38
YBX1-201ENST00000321358 FAM229BQ4G0N7 80 aa12.65□□□□□ -0.38
YBX1-201ENST00000321358 FLG2Q5D862 2391 aaPredicted RBP12.64□□□□□ -0.39
YBX1-201ENST00000321358 TEX49A0A1B0GTD5 131 aa12.64□□□□□ -0.39
YBX1-201ENST00000321358 CRYGAP11844 174 aa12.64□□□□□ -0.39
YBX1-201ENST00000321358 OCIAD2Q56VL3 154 aa12.64□□□□□ -0.39
YBX1-201ENST00000321358 ANAPC11Q9NYG5 84 aa12.64□□□□□ -0.39
YBX1-201ENST00000321358 PKHD1L1Q86WI1 4243 aa12.64□□□□□ -0.39
YBX1-201ENST00000321358 OXTP01178 125 aa12.62□□□□□ -0.39
YBX1-201ENST00000321358 FABP2P12104 132 aa12.62□□□□□ -0.39
YBX1-201ENST00000321358 LINC00483Q53H64 154 aa12.62□□□□□ -0.39
YBX1-201ENST00000321358 TRBV20-1A0A075B6N2 111 aa12.62□□□□□ -0.39
YBX1-201ENST00000321358 A0A1W2PPM0 123 aa12.62□□□□□ -0.39
YBX1-201ENST00000321358 LST1O00453 97 aa12.62□□□□□ -0.39
YBX1-201ENST00000321358 ATXN8Q156A1 80 aa12.62□□□□□ -0.39
YBX1-201ENST00000321358 LINC01600Q96MT4 127 aa12.62□□□□□ -0.39
YBX1-201ENST00000321358 IGLV5-48A0A075B6I7 105 aa12.61□□□□□ -0.39
YBX1-201ENST00000321358 TRACP01848 142 aa12.6□□□□□ -0.39
YBX1-201ENST00000321358 MYCBP2O75592 4640 aa12.6□□□□□ -0.39
YBX1-201ENST00000321358 SPRR1BP22528 89 aa12.59□□□□□ -0.39
YBX1-201ENST00000321358 LAMTOR3Q9UHA4 124 aa12.59□□□□□ -0.39
YBX1-201ENST00000321358 TCL1BO95988 128 aa12.58□□□□□ -0.4
YBX1-201ENST00000321358 PPDPFLQ8WWR9 84 aa12.58□□□□□ -0.4
YBX1-201ENST00000321358 PRR26Q8N8Z3 221 aa12.57□□□□□ -0.4
YBX1-201ENST00000321358 H3BQ85 93 aa12.57□□□□□ -0.4
YBX1-201ENST00000321358 Q8N377 158 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms