RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 Q6ZVQ6 151 aa7.38□□□□□ -1.23
PCDHGC4-201ENST00000306593 DMBT1Q9UGM3 2413 aaPredicted RBP7.37□□□□□ -1.23
PCDHGC4-201ENST00000306593 IGLV6-57P01721 117 aa7.37□□□□□ -1.23
PCDHGC4-201ENST00000306593 ELOF1P60002 83 aaKnown RBP7.37□□□□□ -1.23
PCDHGC4-201ENST00000306593 C1orf137Q5JT78 98 aa7.36□□□□□ -1.23
PCDHGC4-201ENST00000306593 LOC110117498A0A087WWA1 95 aa7.36□□□□□ -1.23
PCDHGC4-201ENST00000306593 NDUFC1O43677 76 aa7.35□□□□□ -1.23
PCDHGC4-201ENST00000306593 TEX15Q9BXT5 2789 aa7.35□□□□□ -1.23
PCDHGC4-201ENST00000306593 REG3GQ6UW15 175 aa7.35□□□□□ -1.23
PCDHGC4-201ENST00000306593 MRPL55Q7Z7F7 128 aaKnown RBP7.35□□□□□ -1.23
PCDHGC4-201ENST00000306593 DNAH10OSP0CZ25 163 aa7.34□□□□□ -1.23
PCDHGC4-201ENST00000306593 CXCL6P80162 114 aa7.34□□□□□ -1.23
PCDHGC4-201ENST00000306593 RETNLBQ9BQ08 111 aa7.34□□□□□ -1.23
PCDHGC4-201ENST00000306593 PRR15LQ9BU68 103 aa7.34□□□□□ -1.23
PCDHGC4-201ENST00000306593 TRAV7A0A075B6U4 112 aa7.34□□□□□ -1.23
PCDHGC4-201ENST00000306593 WIPF1O43516 503 aa7.34□□□□□ -1.23
PCDHGC4-201ENST00000306593 FAM236DA0A1B0GTK5 79 aa7.34□□□□□ -1.24
PCDHGC4-201ENST00000306593 FAM236CP0DP71 79 aa7.34□□□□□ -1.24
PCDHGC4-201ENST00000306593 CELSR2Q9HCU4 2923 aa7.33□□□□□ -1.24
PCDHGC4-201ENST00000306593 A0A087WVE0 104 aa7.33□□□□□ -1.24
PCDHGC4-201ENST00000306593 SNURFQ9Y675 71 aa7.33□□□□□ -1.24
PCDHGC4-201ENST00000306593 NBEAL1Q6ZS30 2694 aa7.33□□□□□ -1.24
PCDHGC4-201ENST00000306593 A0A1B0GW54 56 aa7.32□□□□□ -1.24
PCDHGC4-201ENST00000306593 FAM30AQ9NZY2 134 aa7.32□□□□□ -1.24
PCDHGC4-201ENST00000306593 BCE1O60756 84 aa7.32□□□□□ -1.24
PCDHGC4-201ENST00000306593 SPINK1P00995 79 aa7.32□□□□□ -1.24
PCDHGC4-201ENST00000306593 VPREB1P12018 145 aa7.31□□□□□ -1.24
PCDHGC4-201ENST00000306593 ATP5EP56381 51 aaPredicted RBP7.31□□□□□ -1.24
PCDHGC4-201ENST00000306593 Q6ZQT0 140 aa7.31□□□□□ -1.24
PCDHGC4-201ENST00000306593 IGHV6-1A0A0B4J1U7 121 aa7.31□□□□□ -1.24
PCDHGC4-201ENST00000306593 LINC01547P58512 204 aaPredicted RBP7.31□□□□□ -1.24
PCDHGC4-201ENST00000306593 KRTAP10-11P60412 298 aa7.31□□□□□ -1.24
PCDHGC4-201ENST00000306593 SPATA3Q8NHX4 192 aa7.3□□□□□ -1.24
PCDHGC4-201ENST00000306593 LINC00167Q96N53 147 aa7.3□□□□□ -1.24
PCDHGC4-201ENST00000306593 C22orf24Q9Y442 160 aa7.29□□□□□ -1.24
PCDHGC4-201ENST00000306593 NHLRC4P0CG21 123 aaPredicted RBP7.29□□□□□ -1.24
PCDHGC4-201ENST00000306593 A6NED7 52 aa7.29□□□□□ -1.24
PCDHGC4-201ENST00000306593 LINC00588Q9Y4M8 146 aa7.29□□□□□ -1.24
PCDHGC4-201ENST00000306593 LINC00208Q96KT6 92 aa7.28□□□□□ -1.24
PCDHGC4-201ENST00000306593 CHD6Q8TD26 2715 aa7.28□□□□□ -1.24
PCDHGC4-201ENST00000306593 A0A0U1RQV1 116 aa7.28□□□□□ -1.24
PCDHGC4-201ENST00000306593 SMCR5Q8TEV8 140 aa7.28□□□□□ -1.24
PCDHGC4-201ENST00000306593 A0A087WSZ3 146 aa7.28□□□□□ -1.24
PCDHGC4-201ENST00000306593 VPS13CQ709C8 3753 aa7.27□□□□□ -1.25
PCDHGC4-201ENST00000306593 DEFB116Q30KQ4 102 aa7.27□□□□□ -1.25
PCDHGC4-201ENST00000306593 STAB2Q8WWQ8 2551 aa7.26□□□□□ -1.25
PCDHGC4-201ENST00000306593 CRYGAP11844 174 aa7.26□□□□□ -1.25
PCDHGC4-201ENST00000306593 PRLHP81277 87 aa7.26□□□□□ -1.25
PCDHGC4-201ENST00000306593 Q6ZRP5 223 aa7.26□□□□□ -1.25
PCDHGC4-201ENST00000306593 C15orf56Q8N910 161 aa7.26□□□□□ -1.25
PCDHGC4-201ENST00000306593 Q6ZRX8 168 aa7.25□□□□□ -1.25
PCDHGC4-201ENST00000306593 CSMD2Q7Z408 3487 aa7.25□□□□□ -1.25
PCDHGC4-201ENST00000306593 MXRA5Q9NR99 2828 aa7.25□□□□□ -1.25
PCDHGC4-201ENST00000306593 Q9BRP9 147 aa7.25□□□□□ -1.25
PCDHGC4-201ENST00000306593 OBSCN-AS1Q96MR7 158 aa7.24□□□□□ -1.25
PCDHGC4-201ENST00000306593 KCNQ1DNQ9H478 68 aa7.24□□□□□ -1.25
PCDHGC4-201ENST00000306593 MDFIQ99750 246 aa7.24□□□□□ -1.25
PCDHGC4-201ENST00000306593 FBN2P35556 2912 aa7.24□□□□□ -1.25
PCDHGC4-201ENST00000306593 ZFHX3Q15911 3703 aa7.24□□□□□ -1.25
PCDHGC4-201ENST00000306593 TLX1NBP0CAT3 122 aa7.23□□□□□ -1.25
PCDHGC4-201ENST00000306593 PCOTHQ58A44 107 aa7.23□□□□□ -1.25
PCDHGC4-201ENST00000306593 LINC00528Q8N1L1 170 aa7.23□□□□□ -1.25
PCDHGC4-201ENST00000306593 PLA2G2DQ9UNK4 145 aa7.23□□□□□ -1.25
PCDHGC4-201ENST00000306593 SPACA4Q8TDM5 124 aa7.21□□□□□ -1.25
PCDHGC4-201ENST00000306593 C16orf90A8MZG2 172 aa7.21□□□□□ -1.26
PCDHGC4-201ENST00000306593 TM2D3Q9BRN9 247 aa7.21□□□□□ -1.26
PCDHGC4-201ENST00000306593 APCP25054 2843 aa7.21□□□□□ -1.26
PCDHGC4-201ENST00000306593 UNC79Q9P2D8 2635 aa7.2□□□□□ -1.26
PCDHGC4-201ENST00000306593 NF1P21359 2839 aa7.2□□□□□ -1.26
PCDHGC4-201ENST00000306593 IGKV2D-30A0A075B6S6 120 aa7.19□□□□□ -1.26
PCDHGC4-201ENST00000306593 IGKV2-30P06310 120 aa7.19□□□□□ -1.26
PCDHGC4-201ENST00000306593 K7EIL1 84 aa7.19□□□□□ -1.26
PCDHGC4-201ENST00000306593 IGLV1-50A0A075B6I6 118 aa7.18□□□□□ -1.26
PCDHGC4-201ENST00000306593 UBR5O95071 2799 aaPredicted RBP7.18□□□□□ -1.26
PCDHGC4-201ENST00000306593 Q8NBF4 154 aa7.18□□□□□ -1.26
PCDHGC4-201ENST00000306593 V9GYY9 64 aa7.17□□□□□ -1.26
PCDHGC4-201ENST00000306593 SERTAD4-AS1Q5TG53 156 aa7.17□□□□□ -1.26
PCDHGC4-201ENST00000306593 TRBV7-4A0A0J9YYF1 115 aa7.17□□□□□ -1.26
PCDHGC4-201ENST00000306593 FAM229AH3BQW9 127 aa7.17□□□□□ -1.26
PCDHGC4-201ENST00000306593 C9orf129Q5T035 196 aaKnown RBP7.17□□□□□ -1.26
PCDHGC4-201ENST00000306593 TMEM254Q8TBM7 123 aa7.15□□□□□ -1.27
PCDHGC4-201ENST00000306593 ITPR2Q14571 2701 aa7.14□□□□□ -1.27
PCDHGC4-201ENST00000306593 NBDYA0A0U1RRE5 68 aa7.14□□□□□ -1.27
PCDHGC4-201ENST00000306593 IGLV5-37A0A075B6J1 123 aa7.13□□□□□ -1.27
PCDHGC4-201ENST00000306593 RPS28P62857 69 aaKnown RBP7.13□□□□□ -1.27
PCDHGC4-201ENST00000306593 LIMD2Q9BT23 127 aa7.13□□□□□ -1.27
PCDHGC4-201ENST00000306593 HCG22E2RYF7 251 aa7.13□□□□□ -1.27
PCDHGC4-201ENST00000306593 J3QL48 77 aa7.12□□□□□ -1.27
PCDHGC4-201ENST00000306593 hDV103S1A0JD37 113 aa7.12□□□□□ -1.27
PCDHGC4-201ENST00000306593 MOBPQ13875 183 aa7.12□□□□□ -1.27
PCDHGC4-201ENST00000306593 SMIM26A0A096LP01 95 aa7.12□□□□□ -1.27
PCDHGC4-201ENST00000306593 FAM168BA1KXE4 195 aa7.11□□□□□ -1.27
PCDHGC4-201ENST00000306593 CUBNO60494 3623 aa7.11□□□□□ -1.27
PCDHGC4-201ENST00000306593 LINC00476Q8WZB0 136 aa7.11□□□□□ -1.27
PCDHGC4-201ENST00000306593 ST20-AS1Q8NBB2 130 aa7.1□□□□□ -1.27
PCDHGC4-201ENST00000306593 Q8N377 158 aa7.09□□□□□ -1.27
PCDHGC4-201ENST00000306593 ERC2-IT1O76042 136 aa7.09□□□□□ -1.27
PCDHGC4-201ENST00000306593 GCN1Q92616 2671 aaKnown RBP7.09□□□□□ -1.27
PCDHGC4-201ENST00000306593 CNBPP62633 177 aaKnown RBP7.08□□□□□ -1.28
PCDHGC4-201ENST00000306593 H0Y9P7 68 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms