RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 K7EQZ3 153 aa10.65□□□□□ -0.7
ARHGEF28-201ENST00000296794 KCNQ1DNQ9H478 68 aa10.65□□□□□ -0.7
ARHGEF28-201ENST00000296794 ERC2-IT1O76042 136 aa10.65□□□□□ -0.71
ARHGEF28-201ENST00000296794 TEP1Q99973 2627 aaKnown RBP10.64□□□□□ -0.71
ARHGEF28-201ENST00000296794 IGKV2D-30A0A075B6S6 120 aa10.64□□□□□ -0.71
ARHGEF28-201ENST00000296794 IGKV2-30P06310 120 aa10.64□□□□□ -0.71
ARHGEF28-201ENST00000296794 CHTF8P0CG12 524 aa10.63□□□□□ -0.71
ARHGEF28-201ENST00000296794 TYMSOSQ8TAI1 123 aa10.63□□□□□ -0.71
ARHGEF28-201ENST00000296794 IGLV1-50A0A075B6I6 118 aa10.62□□□□□ -0.71
ARHGEF28-201ENST00000296794 KRTAP10-3P60369 221 aa10.62□□□□□ -0.71
ARHGEF28-201ENST00000296794 KRTAP1-3Q8IUG1 177 aa10.62□□□□□ -0.71
ARHGEF28-201ENST00000296794 SPAG11AQ6PDA7 123 aa10.62□□□□□ -0.71
ARHGEF28-201ENST00000296794 LINC00612Q8N6U2 182 aa10.62□□□□□ -0.71
ARHGEF28-201ENST00000296794 PLA2G1BP04054 148 aaKnown RBP10.61□□□□□ -0.71
ARHGEF28-201ENST00000296794 KLKP1Q107X0 134 aa10.61□□□□□ -0.71
ARHGEF28-201ENST00000296794 C15orf56Q8N910 161 aa10.6□□□□□ -0.71
ARHGEF28-201ENST00000296794 RANBP2P49792 3224 aaKnown RBP10.59□□□□□ -0.71
ARHGEF28-201ENST00000296794 ACYP2P14621 99 aa10.58□□□□□ -0.72
ARHGEF28-201ENST00000296794 KRTAP1-1Q07627 177 aa10.57□□□□□ -0.72
ARHGEF28-201ENST00000296794 A0A1B0GU69 56 aa10.57□□□□□ -0.72
ARHGEF28-201ENST00000296794 A8MWP4 228 aa10.56□□□□□ -0.72
ARHGEF28-201ENST00000296794 Q8N377 158 aa10.56□□□□□ -0.72
ARHGEF28-201ENST00000296794 H7BZZ5 65 aa10.55□□□□□ -0.72
ARHGEF28-201ENST00000296794 J3QL48 77 aa10.55□□□□□ -0.72
ARHGEF28-201ENST00000296794 C7orf65Q6ZTY9 151 aa10.55□□□□□ -0.72
ARHGEF28-201ENST00000296794 IGFL1Q6UW32 110 aa10.53□□□□□ -0.72
ARHGEF28-201ENST00000296794 LINC01600Q96MT4 127 aa10.53□□□□□ -0.72
ARHGEF28-201ENST00000296794 FAM104AQ969W3 186 aa10.51□□□□□ -0.73
ARHGEF28-201ENST00000296794 CFAP54Q96N23 3096 aa10.5□□□□□ -0.73
ARHGEF28-201ENST00000296794 A8MUN3 132 aa10.5□□□□□ -0.73
ARHGEF28-201ENST00000296794 OBSCN-AS1Q96MR7 158 aa10.49□□□□□ -0.73
ARHGEF28-201ENST00000296794 ZNF292O60281 2723 aa10.48□□□□□ -0.73
ARHGEF28-201ENST00000296794 AKAP13Q12802 2813 aa10.48□□□□□ -0.73
ARHGEF28-201ENST00000296794 A0A0G2JQZ4 141 aa10.48□□□□□ -0.73
ARHGEF28-201ENST00000296794 A0A1W2PNN7 141 aa10.48□□□□□ -0.73
ARHGEF28-201ENST00000296794 LINC00313P59037 77 aa10.47□□□□□ -0.73
ARHGEF28-201ENST00000296794 MKI67P46013 3256 aaKnown RBP10.47□□□□□ -0.73
ARHGEF28-201ENST00000296794 A0A087WTM6 91 aa10.47□□□□□ -0.73
ARHGEF28-201ENST00000296794 COA5Q86WW8 74 aa10.46□□□□□ -0.74
ARHGEF28-201ENST00000296794 COL6A5A8TX70 2615 aa10.46□□□□□ -0.74
ARHGEF28-201ENST00000296794 PRR15Q8IV56 129 aa10.46□□□□□ -0.74
ARHGEF28-201ENST00000296794 TRANK1O15050 2925 aa10.46□□□□□ -0.74
ARHGEF28-201ENST00000296794 TEX15Q9BXT5 2789 aa10.45□□□□□ -0.74
ARHGEF28-201ENST00000296794 LOC101927531A0A1B0GV80 90 aa10.45□□□□□ -0.74
ARHGEF28-201ENST00000296794 MRPL34Q9BQ48 92 aaKnown RBP10.44□□□□□ -0.74
ARHGEF28-201ENST00000296794 LAMA3Q16787 3333 aa10.44□□□□□ -0.74
ARHGEF28-201ENST00000296794 TLX1NBP0CAT3 122 aa10.44□□□□□ -0.74
ARHGEF28-201ENST00000296794 LAMA2P24043 3122 aaKnown RBP10.44□□□□□ -0.74
ARHGEF28-201ENST00000296794 LINC00336Q6ZUF6 198 aa10.44□□□□□ -0.74
ARHGEF28-201ENST00000296794 C9orf163Q8N9P6 203 aa10.44□□□□□ -0.74
ARHGEF28-201ENST00000296794 PLA2G2DQ9UNK4 145 aa10.43□□□□□ -0.74
ARHGEF28-201ENST00000296794 A0A1W2PNM2 257 aa10.41□□□□□ -0.74
ARHGEF28-201ENST00000296794 APLNQ9ULZ1 77 aa10.4□□□□□ -0.75
ARHGEF28-201ENST00000296794 ATP11AUNQ6ZP68 121 aa10.39□□□□□ -0.75
ARHGEF28-201ENST00000296794 BRCA2P51587 3418 aa10.38□□□□□ -0.75
ARHGEF28-201ENST00000296794 ZNF861PO60384 105 aa10.38□□□□□ -0.75
ARHGEF28-201ENST00000296794 C8orf17Q9NRJ1 99 aa10.38□□□□□ -0.75
ARHGEF28-201ENST00000296794 CYP4F30PQ9H0H9 118 aa10.37□□□□□ -0.75
ARHGEF28-201ENST00000296794 CASC10Q5T4H9 136 aa10.37□□□□□ -0.75
ARHGEF28-201ENST00000296794 C8orf87E5RJ46 101 aa10.36□□□□□ -0.75
ARHGEF28-201ENST00000296794 Q96NJ1 140 aa10.36□□□□□ -0.75
ARHGEF28-201ENST00000296794 SMR3BP02814 79 aaPredicted RBP10.36□□□□□ -0.75
ARHGEF28-201ENST00000296794 SSBP3-AS1Q7Z2R9 100 aa10.36□□□□□ -0.75
ARHGEF28-201ENST00000296794 IGLV8-61A0A075B6I0 122 aa10.35□□□□□ -0.75
ARHGEF28-201ENST00000296794 IGLV5-48A0A075B6I7 105 aa10.33□□□□□ -0.76
ARHGEF28-201ENST00000296794 CHD6Q8TD26 2715 aa10.32□□□□□ -0.76
ARHGEF28-201ENST00000296794 LINC00304Q8N9R0 145 aa10.32□□□□□ -0.76
ARHGEF28-201ENST00000296794 A0A1B0GVX0 72 aa10.32□□□□□ -0.76
ARHGEF28-201ENST00000296794 BAHCC1Q9P281 2608 aa10.31□□□□□ -0.76
ARHGEF28-201ENST00000296794 UNC79Q9P2D8 2635 aa10.31□□□□□ -0.76
ARHGEF28-201ENST00000296794 MGAQ8IWI9 3026 aa10.3□□□□□ -0.76
ARHGEF28-201ENST00000296794 DSCR10P59022 87 aa10.28□□□□□ -0.76
ARHGEF28-201ENST00000296794 CNBPP62633 177 aaKnown RBP10.27□□□□□ -0.76
ARHGEF28-201ENST00000296794 NOTCH1P46531 2555 aa10.27□□□□□ -0.77
ARHGEF28-201ENST00000296794 OCR1Q9BZK8 76 aa10.27□□□□□ -0.77
ARHGEF28-201ENST00000296794 UNC80Q8N2C7 3258 aa10.26□□□□□ -0.77
ARHGEF28-201ENST00000296794 NBEAL1Q6ZS30 2694 aa10.26□□□□□ -0.77
ARHGEF28-201ENST00000296794 IGLV5-37A0A075B6J1 123 aa10.25□□□□□ -0.77
ARHGEF28-201ENST00000296794 IGLV7-43P04211 117 aa10.25□□□□□ -0.77
ARHGEF28-201ENST00000296794 ANAPC11Q9NYG5 84 aa10.25□□□□□ -0.77
ARHGEF28-201ENST00000296794 COX6B2Q6YFQ2 88 aa10.24□□□□□ -0.77
ARHGEF28-201ENST00000296794 PSORS1C2Q9UIG4 136 aa10.24□□□□□ -0.77
ARHGEF28-201ENST00000296794 WIPF1O43516 503 aa10.23□□□□□ -0.77
ARHGEF28-201ENST00000296794 UQCR11O14957 56 aa10.21□□□□□ -0.77
ARHGEF28-201ENST00000296794 SPANXA2-OT1Q8N9U9 137 aa10.21□□□□□ -0.78
ARHGEF28-201ENST00000296794 Q8NDZ9 215 aa10.21□□□□□ -0.78
ARHGEF28-201ENST00000296794 SPRR4Q96PI1 79 aa10.2□□□□□ -0.78
ARHGEF28-201ENST00000296794 WDFY4Q6ZS81 3184 aa10.2□□□□□ -0.78
ARHGEF28-201ENST00000296794 DSPP15924 2871 aaKnown RBP10.2□□□□□ -0.78
ARHGEF28-201ENST00000296794 PRUNE2Q8WUY3 3088 aa10.18□□□□□ -0.78
ARHGEF28-201ENST00000296794 TNP2Q05952 138 aa10.17□□□□□ -0.78
ARHGEF28-201ENST00000296794 CYSTM1Q9H1C7 97 aa10.17□□□□□ -0.78
ARHGEF28-201ENST00000296794 TRIOO75962 3097 aa10.15□□□□□ -0.78
ARHGEF28-201ENST00000296794 IGSF10Q6WRI0 2623 aa10.15□□□□□ -0.78
ARHGEF28-201ENST00000296794 CR1P17927 2039 aa10.15□□□□□ -0.78
ARHGEF28-201ENST00000296794 MIR22HGQ0VDD5 57 aa10.13□□□□□ -0.79
ARHGEF28-201ENST00000296794 MAP1AP78559 2803 aaPredicted RBP10.12□□□□□ -0.79
ARHGEF28-201ENST00000296794 C9orf92A6NGG3 77 aa10.11□□□□□ -0.79
ARHGEF28-201ENST00000296794 XIRP2A4UGR9 3374 aa10.11□□□□□ -0.79
ARHGEF28-201ENST00000296794 UBR5O95071 2799 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms