RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 LCA10Q71F78 164 aa7.24□□□□□ -1.25
PBRM1-201ENST00000296302 MIR22HGQ0VDD5 57 aa7.24□□□□□ -1.25
PBRM1-201ENST00000296302 A0A1B0GVX0 72 aa7.23□□□□□ -1.25
PBRM1-201ENST00000296302 A0A1W2PNM2 257 aa7.23□□□□□ -1.25
PBRM1-201ENST00000296302 C19orf73Q9NVV2 129 aa7.23□□□□□ -1.25
PBRM1-201ENST00000296302 SPTBN4Q9H254 2564 aa7.22□□□□□ -1.25
PBRM1-201ENST00000296302 SPINT4Q6UDR6 99 aa7.22□□□□□ -1.25
PBRM1-201ENST00000296302 POLQO75417 2590 aa7.22□□□□□ -1.25
PBRM1-201ENST00000296302 ANKRD17O75179 2603 aaKnown RBP7.22□□□□□ -1.25
PBRM1-201ENST00000296302 OCR1Q9BZK8 76 aa7.21□□□□□ -1.26
PBRM1-201ENST00000296302 IGLV5-48A0A075B6I7 105 aa7.2□□□□□ -1.26
PBRM1-201ENST00000296302 TYMSOSQ8TAI1 123 aa7.2□□□□□ -1.26
PBRM1-201ENST00000296302 Q96NJ1 140 aa7.2□□□□□ -1.26
PBRM1-201ENST00000296302 CHD8Q9HCK8 2581 aa7.2□□□□□ -1.26
PBRM1-201ENST00000296302 Q1T7F1 81 aa7.2□□□□□ -1.26
PBRM1-201ENST00000296302 CDC42SE1Q9NRR8 79 aa7.2□□□□□ -1.26
PBRM1-201ENST00000296302 SSBP3-AS1Q7Z2R9 100 aa7.17□□□□□ -1.26
PBRM1-201ENST00000296302 A0A0G2JQZ4 141 aa7.16□□□□□ -1.26
PBRM1-201ENST00000296302 A0A1W2PNN7 141 aa7.16□□□□□ -1.26
PBRM1-201ENST00000296302 F8P00451 2351 aa7.16□□□□□ -1.26
PBRM1-201ENST00000296302 ACANP16112 2415 aa7.15□□□□□ -1.26
PBRM1-201ENST00000296302 A0A096LNT2 108 aa7.15□□□□□ -1.26
PBRM1-201ENST00000296302 DSCR10P59022 87 aa7.15□□□□□ -1.27
PBRM1-201ENST00000296302 FAM104AQ969W3 186 aa7.14□□□□□ -1.27
PBRM1-201ENST00000296302 KRTAP24-1Q3LI83 254 aa7.14□□□□□ -1.27
PBRM1-201ENST00000296302 ZNF861PO60384 105 aa7.13□□□□□ -1.27
PBRM1-201ENST00000296302 IGLV5-37A0A075B6J1 123 aa7.13□□□□□ -1.27
PBRM1-201ENST00000296302 Q5XG85 94 aa7.13□□□□□ -1.27
PBRM1-201ENST00000296302 C9orf163Q8N9P6 203 aa7.11□□□□□ -1.27
PBRM1-201ENST00000296302 SPRR4Q96PI1 79 aa7.11□□□□□ -1.27
PBRM1-201ENST00000296302 CRIPTQ9P021 101 aa7.09□□□□□ -1.27
PBRM1-201ENST00000296302 PLA2G1BP04054 148 aaKnown RBP7.08□□□□□ -1.28
PBRM1-201ENST00000296302 CNBPP62633 177 aaKnown RBP7.07□□□□□ -1.28
PBRM1-201ENST00000296302 IGLV7-46A0A075B6I9 117 aa7.06□□□□□ -1.28
PBRM1-201ENST00000296302 Q75L30 129 aa7.06□□□□□ -1.28
PBRM1-201ENST00000296302 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
PBRM1-201ENST00000296302 CYSTM1Q9H1C7 97 aa7.05□□□□□ -1.28
PBRM1-201ENST00000296302 KRTAP10-11P60412 298 aa7.05□□□□□ -1.28
PBRM1-201ENST00000296302 PRRC2CQ9Y520 2896 aaKnown RBP7.05□□□□□ -1.28
PBRM1-201ENST00000296302 KRTAP10-3P60369 221 aa7.03□□□□□ -1.28
PBRM1-201ENST00000296302 PRR26Q8N8Z3 221 aa7.02□□□□□ -1.29
PBRM1-201ENST00000296302 CASC10Q5T4H9 136 aa7.02□□□□□ -1.29
PBRM1-201ENST00000296302 APLNQ9ULZ1 77 aa7.02□□□□□ -1.29
PBRM1-201ENST00000296302 RBM12B-AS1Q9P1G2 102 aa7.01□□□□□ -1.29
PBRM1-201ENST00000296302 A0A087WTM6 91 aa7.01□□□□□ -1.29
PBRM1-201ENST00000296302 LINC00304Q8N9R0 145 aa7.01□□□□□ -1.29
PBRM1-201ENST00000296302 FAM229BQ4G0N7 80 aa7.01□□□□□ -1.29
PBRM1-201ENST00000296302 IGLV7-43P04211 117 aa7□□□□□ -1.29
PBRM1-201ENST00000296302 Q8N9P0 234 aaPredicted RBP7□□□□□ -1.29
PBRM1-201ENST00000296302 PSORS1C2Q9UIG4 136 aa7□□□□□ -1.29
PBRM1-201ENST00000296302 ANAPC11Q9NYG5 84 aa7□□□□□ -1.29
PBRM1-201ENST00000296302 K7EIL1 84 aa6.99□□□□□ -1.29
PBRM1-201ENST00000296302 LINC01558Q9Y6Z2 57 aa6.99□□□□□ -1.29
PBRM1-201ENST00000296302 FASNP49327 2511 aaKnown RBP6.97□□□□□ -1.29
PBRM1-201ENST00000296302 CR1P17927 2039 aa6.96□□□□□ -1.3
PBRM1-201ENST00000296302 Q8N1X5 172 aa6.93□□□□□ -1.3
PBRM1-201ENST00000296302 Q8NDZ9 215 aa6.93□□□□□ -1.3
PBRM1-201ENST00000296302 MMP24-AS1A0A0U1RRL7 71 aa6.92□□□□□ -1.3
PBRM1-201ENST00000296302 OXTP01178 125 aa6.92□□□□□ -1.3
PBRM1-201ENST00000296302 SPRR1AP35321 89 aa6.92□□□□□ -1.3
PBRM1-201ENST00000296302 Q5VV11 94 aa6.92□□□□□ -1.3
PBRM1-201ENST00000296302 C9orf92A6NGG3 77 aa6.92□□□□□ -1.3
PBRM1-201ENST00000296302 LINC01554Q52M75 96 aa6.92□□□□□ -1.3
PBRM1-201ENST00000296302 WWC2-AS2Q96NR7 200 aa6.92□□□□□ -1.3
PBRM1-201ENST00000296302 HRES1P13985 223 aa6.91□□□□□ -1.3
PBRM1-201ENST00000296302 KRTAP1-3Q8IUG1 177 aa6.9□□□□□ -1.31
PBRM1-201ENST00000296302 GOLGB1Q14789 3259 aaKnown RBP6.9□□□□□ -1.31
PBRM1-201ENST00000296302 EPG5Q9HCE0 2579 aa6.88□□□□□ -1.31
PBRM1-201ENST00000296302 USP24Q9UPU5 2620 aa6.88□□□□□ -1.31
PBRM1-201ENST00000296302 DNAH12Q6ZR08 3092 aa6.87□□□□□ -1.31
PBRM1-201ENST00000296302 A0A0D9SG42 100 aa6.86□□□□□ -1.31
PBRM1-201ENST00000296302 A0A1B0GU33 70 aa6.86□□□□□ -1.31
PBRM1-201ENST00000296302 KRTAP1-1Q07627 177 aa6.86□□□□□ -1.31
PBRM1-201ENST00000296302 SPRR1BP22528 89 aa6.85□□□□□ -1.31
PBRM1-201ENST00000296302 LINC00472Q9H8W2 130 aa6.84□□□□□ -1.31
PBRM1-201ENST00000296302 BPTFQ12830 3046 aa6.83□□□□□ -1.32
PBRM1-201ENST00000296302 PRAC1Q96KF2 57 aa6.82□□□□□ -1.32
PBRM1-201ENST00000296302 SPINK7P58062 85 aa6.81□□□□□ -1.32
PBRM1-201ENST00000296302 MGAM2Q2M2H8 2515 aa6.81□□□□□ -1.32
PBRM1-201ENST00000296302 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.78□□□□□ -1.32
PBRM1-201ENST00000296302 LUZP6Q538Z0 58 aa6.78□□□□□ -1.32
PBRM1-201ENST00000296302 H3BS24 57 aa6.77□□□□□ -1.33
PBRM1-201ENST00000296302 TNP2Q05952 138 aa6.76□□□□□ -1.33
PBRM1-201ENST00000296302 Q5W150 140 aa6.76□□□□□ -1.33
PBRM1-201ENST00000296302 COX6B2Q6YFQ2 88 aa6.75□□□□□ -1.33
PBRM1-201ENST00000296302 FLNAP21333 2647 aaKnown RBP6.75□□□□□ -1.33
PBRM1-201ENST00000296302 SMR3BP02814 79 aaPredicted RBP6.75□□□□□ -1.33
PBRM1-201ENST00000296302 CSAG1Q6PB30 78 aa6.74□□□□□ -1.33
PBRM1-201ENST00000296302 DMAC1Q96GE9 116 aa6.74□□□□□ -1.33
PBRM1-201ENST00000296302 ZCCHC13Q8WW36 166 aaKnown RBP6.74□□□□□ -1.33
PBRM1-201ENST00000296302 CEP350Q5VT06 3117 aa6.74□□□□□ -1.33
PBRM1-201ENST00000296302 KRTAP26-1Q6PEX3 210 aa6.73□□□□□ -1.33
PBRM1-201ENST00000296302 PLAC8Q9NZF1 115 aa6.72□□□□□ -1.33
PBRM1-201ENST00000296302 HECTD1Q9ULT8 2610 aa6.72□□□□□ -1.33
PBRM1-201ENST00000296302 ASB16-AS1Q495Z4 193 aa6.7□□□□□ -1.34
PBRM1-201ENST00000296302 ATRQ13535 2644 aa6.7□□□□□ -1.34
PBRM1-201ENST00000296302 FLNBO75369 2602 aaKnown RBP6.68□□□□□ -1.34
PBRM1-201ENST00000296302 KRTAP29-1A8MX34 341 aaPredicted RBP6.68□□□□□ -1.34
PBRM1-201ENST00000296302 ITPR3Q14573 2671 aa6.68□□□□□ -1.34
PBRM1-201ENST00000296302 Q6ZR54 194 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms