RNA–Protein interactions for RNA: ENST00000285681.6

USP25-202, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-202ENST00000285681 C9orf163Q8N9P6 203 aa13.33□□□□□ -0.28
USP25-202ENST00000285681 C8orf87E5RJ46 101 aa13.33□□□□□ -0.28
USP25-202ENST00000285681 A8MWP4 228 aa13.32□□□□□ -0.28
USP25-202ENST00000285681 ZNF861PO60384 105 aa13.31□□□□□ -0.28
USP25-202ENST00000285681 C9orf129Q5T035 196 aaKnown RBP13.29□□□□□ -0.28
USP25-202ENST00000285681 ITPR3Q14573 2671 aa13.29□□□□□ -0.28
USP25-202ENST00000285681 EIF4EBP3O60516 100 aaPredicted RBP13.29□□□□□ -0.28
USP25-202ENST00000285681 BPTFQ12830 3046 aa13.28□□□□□ -0.28
USP25-202ENST00000285681 TLX1NBP0CAT3 122 aa13.27□□□□□ -0.29
USP25-202ENST00000285681 SSBP3-AS1Q7Z2R9 100 aa13.26□□□□□ -0.29
USP25-202ENST00000285681 APLNQ9ULZ1 77 aa13.26□□□□□ -0.29
USP25-202ENST00000285681 MRPL34Q9BQ48 92 aaKnown RBP13.26□□□□□ -0.29
USP25-202ENST00000285681 IGFL1Q6UW32 110 aa13.25□□□□□ -0.29
USP25-202ENST00000285681 LOC101927531A0A1B0GV80 90 aa13.25□□□□□ -0.29
USP25-202ENST00000285681 CEP350Q5VT06 3117 aa13.24□□□□□ -0.29
USP25-202ENST00000285681 K7EQZ3 153 aa13.24□□□□□ -0.29
USP25-202ENST00000285681 LINC00304Q8N9R0 145 aa13.24□□□□□ -0.29
USP25-202ENST00000285681 PLA2G2DQ9UNK4 145 aa13.23□□□□□ -0.29
USP25-202ENST00000285681 SMR3BP02814 79 aaPredicted RBP13.22□□□□□ -0.29
USP25-202ENST00000285681 SPAG11AQ6PDA7 123 aa13.22□□□□□ -0.29
USP25-202ENST00000285681 LINC00336Q6ZUF6 198 aa13.21□□□□□ -0.29
USP25-202ENST00000285681 UTRNP46939 3433 aa13.19□□□□□ -0.3
USP25-202ENST00000285681 Q8N377 158 aa13.18□□□□□ -0.3
USP25-202ENST00000285681 CFAP46Q8IYW2 2715 aa13.18□□□□□ -0.3
USP25-202ENST00000285681 CASC10Q5T4H9 136 aa13.17□□□□□ -0.3
USP25-202ENST00000285681 ZNF575Q86XF7 245 aa13.17□□□□□ -0.3
USP25-202ENST00000285681 CNBPP62633 177 aaKnown RBP13.16□□□□□ -0.3
USP25-202ENST00000285681 A0A1W2PNN7 141 aa13.15□□□□□ -0.3
USP25-202ENST00000285681 IGLV7-43P04211 117 aa13.15□□□□□ -0.31
USP25-202ENST00000285681 DSCR10P59022 87 aa13.14□□□□□ -0.31
USP25-202ENST00000285681 PSORS1C2Q9UIG4 136 aa13.13□□□□□ -0.31
USP25-202ENST00000285681 C8orf17Q9NRJ1 99 aa13.13□□□□□ -0.31
USP25-202ENST00000285681 PRR15Q8IV56 129 aa13.12□□□□□ -0.31
USP25-202ENST00000285681 ANAPC11Q9NYG5 84 aa13.1□□□□□ -0.31
USP25-202ENST00000285681 CENPEQ02224 2701 aa13.1□□□□□ -0.31
USP25-202ENST00000285681 COX6B2Q6YFQ2 88 aa13.09□□□□□ -0.31
USP25-202ENST00000285681 A0A1B0GVX0 72 aa13.08□□□□□ -0.31
USP25-202ENST00000285681 OBSCN-AS1Q96MR7 158 aa13.08□□□□□ -0.31
USP25-202ENST00000285681 CHD7Q9P2D1 2997 aa13.08□□□□□ -0.32
USP25-202ENST00000285681 A0A0G2JQZ4 141 aa13.07□□□□□ -0.32
USP25-202ENST00000285681 C9orf92A6NGG3 77 aa13.05□□□□□ -0.32
USP25-202ENST00000285681 SPRR4Q96PI1 79 aa13.05□□□□□ -0.32
USP25-202ENST00000285681 IGLV8-61A0A075B6I0 122 aa13.05□□□□□ -0.32
USP25-202ENST00000285681 ERC2-IT1O76042 136 aa13.05□□□□□ -0.32
USP25-202ENST00000285681 RPS28P62857 69 aaKnown RBP13.03□□□□□ -0.32
USP25-202ENST00000285681 TNP2Q05952 138 aa12.96□□□□□ -0.33
USP25-202ENST00000285681 IGLV5-37A0A075B6J1 123 aa12.95□□□□□ -0.34
USP25-202ENST00000285681 WIPF1O43516 503 aa12.95□□□□□ -0.34
USP25-202ENST00000285681 COA5Q86WW8 74 aa12.95□□□□□ -0.34
USP25-202ENST00000285681 PRO0628Q9UI54 55 aa12.94□□□□□ -0.34
USP25-202ENST00000285681 LINC01600Q96MT4 127 aa12.93□□□□□ -0.34
USP25-202ENST00000285681 STAB1Q9NY15 2570 aa12.92□□□□□ -0.34
USP25-202ENST00000285681 A0A1W2PNM2 257 aa12.92□□□□□ -0.34
USP25-202ENST00000285681 C4orf26Q17RF5 130 aa12.9□□□□□ -0.34
USP25-202ENST00000285681 CHD9Q3L8U1 2897 aa12.88□□□□□ -0.35
USP25-202ENST00000285681 C5orf42Q9H799 3197 aa12.87□□□□□ -0.35
USP25-202ENST00000285681 TEP1Q99973 2627 aaKnown RBP12.86□□□□□ -0.35
USP25-202ENST00000285681 SETXQ7Z333 2677 aaKnown RBP12.84□□□□□ -0.35
USP25-202ENST00000285681 IGLV5-48A0A075B6I7 105 aa12.83□□□□□ -0.36
USP25-202ENST00000285681 KLKP1Q107X0 134 aa12.83□□□□□ -0.36
USP25-202ENST00000285681 RBM12B-AS1Q9P1G2 102 aa12.81□□□□□ -0.36
USP25-202ENST00000285681 UQCR11O14957 56 aa12.8□□□□□ -0.36
USP25-202ENST00000285681 RANBP2P49792 3224 aaKnown RBP12.79□□□□□ -0.36
USP25-202ENST00000285681 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.79□□□□□ -0.36
USP25-202ENST00000285681 A8MUN3 132 aa12.78□□□□□ -0.36
USP25-202ENST00000285681 ZNF292O60281 2723 aa12.78□□□□□ -0.36
USP25-202ENST00000285681 AKAP13Q12802 2813 aa12.76□□□□□ -0.37
USP25-202ENST00000285681 CYP4F30PQ9H0H9 118 aa12.75□□□□□ -0.37
USP25-202ENST00000285681 TEX15Q9BXT5 2789 aa12.74□□□□□ -0.37
USP25-202ENST00000285681 CD164Q04900 197 aa12.72□□□□□ -0.37
USP25-202ENST00000285681 FAM104AQ969W3 186 aa12.72□□□□□ -0.37
USP25-202ENST00000285681 CR1P17927 2039 aa12.72□□□□□ -0.37
USP25-202ENST00000285681 HTTP42858 3142 aa12.69□□□□□ -0.38
USP25-202ENST00000285681 PRR26Q8N8Z3 221 aa12.68□□□□□ -0.38
USP25-202ENST00000285681 COL6A5A8TX70 2615 aa12.68□□□□□ -0.38
USP25-202ENST00000285681 CHD6Q8TD26 2715 aa12.67□□□□□ -0.38
USP25-202ENST00000285681 PCNTO95613 3336 aa12.67□□□□□ -0.38
USP25-202ENST00000285681 MGAQ8IWI9 3026 aa12.67□□□□□ -0.38
USP25-202ENST00000285681 H7BZZ5 65 aa12.65□□□□□ -0.38
USP25-202ENST00000285681 Q8N1X5 172 aa12.65□□□□□ -0.38
USP25-202ENST00000285681 MIR22HGQ0VDD5 57 aa12.64□□□□□ -0.39
USP25-202ENST00000285681 IGLV7-46A0A075B6I9 117 aa12.63□□□□□ -0.39
USP25-202ENST00000285681 PLAC8Q9NZF1 115 aa12.63□□□□□ -0.39
USP25-202ENST00000285681 FAM229BQ4G0N7 80 aa12.62□□□□□ -0.39
USP25-202ENST00000285681 Q6ZSA8 131 aa12.6□□□□□ -0.39
USP25-202ENST00000285681 SPANXA2-OT1Q8N9U9 137 aa12.58□□□□□ -0.39
USP25-202ENST00000285681 TRANK1O15050 2925 aa12.57□□□□□ -0.4
USP25-202ENST00000285681 UNC79Q9P2D8 2635 aa12.56□□□□□ -0.4
USP25-202ENST00000285681 SPINT4Q6UDR6 99 aa12.54□□□□□ -0.4
USP25-202ENST00000285681 CRIPTQ9P021 101 aa12.54□□□□□ -0.4
USP25-202ENST00000285681 LINC01554Q52M75 96 aa12.53□□□□□ -0.4
USP25-202ENST00000285681 SPRR1AP35321 89 aa12.51□□□□□ -0.41
USP25-202ENST00000285681 NOTCH1P46531 2555 aa12.5□□□□□ -0.41
USP25-202ENST00000285681 LAMA3Q16787 3333 aa12.5□□□□□ -0.41
USP25-202ENST00000285681 OCR1Q9BZK8 76 aa12.48□□□□□ -0.41
USP25-202ENST00000285681 KRTAP1-5Q9BYS1 174 aa12.47□□□□□ -0.41
USP25-202ENST00000285681 Q8NDZ9 215 aa12.47□□□□□ -0.41
USP25-202ENST00000285681 CFAP54Q96N23 3096 aa12.46□□□□□ -0.42
USP25-202ENST00000285681 NBEAL1Q6ZS30 2694 aa12.45□□□□□ -0.42
USP25-202ENST00000285681 BAHCC1Q9P281 2608 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms