RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 C16orf90A8MZG2 172 aa10.49□□□□□ -0.73
CTDSP1-201ENST00000273062 IGLV6-57P01721 117 aa10.49□□□□□ -0.73
CTDSP1-201ENST00000273062 C11orf45Q8TAV5 145 aa10.49□□□□□ -0.73
CTDSP1-201ENST00000273062 IGLV10-54A0A075B6I4 117 aa10.48□□□□□ -0.73
CTDSP1-201ENST00000273062 SPTSSBQ8NFR3 76 aa10.48□□□□□ -0.73
CTDSP1-201ENST00000273062 ATRQ13535 2644 aa10.47□□□□□ -0.73
CTDSP1-201ENST00000273062 ZCCHC13Q8WW36 166 aaKnown RBP10.47□□□□□ -0.73
CTDSP1-201ENST00000273062 LCE6AA0A183 80 aa10.46□□□□□ -0.74
CTDSP1-201ENST00000273062 M0R378 163 aa10.46□□□□□ -0.74
CTDSP1-201ENST00000273062 COX17Q14061 63 aa10.46□□□□□ -0.74
CTDSP1-201ENST00000273062 DIRC1Q969H9 104 aa10.45□□□□□ -0.74
CTDSP1-201ENST00000273062 C16orf74Q96GX8 76 aa10.45□□□□□ -0.74
CTDSP1-201ENST00000273062 CMC4P56277 68 aaPredicted RBP10.44□□□□□ -0.74
CTDSP1-201ENST00000273062 ST20-AS1Q8NBB2 130 aa10.44□□□□□ -0.74
CTDSP1-201ENST00000273062 UBE2BP63146 152 aa10.43□□□□□ -0.74
CTDSP1-201ENST00000273062 UNQ6190/PRO20217Q6UXQ8 127 aa10.43□□□□□ -0.74
CTDSP1-201ENST00000273062 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.43□□□□□ -0.74
CTDSP1-201ENST00000273062 CHKB-CPT1BH3BT56 60 aa10.42□□□□□ -0.74
CTDSP1-201ENST00000273062 A0A096LPF7 62 aa10.42□□□□□ -0.74
CTDSP1-201ENST00000273062 IGHV4-28A0A0C4DH34 117 aa10.42□□□□□ -0.74
CTDSP1-201ENST00000273062 C4orf48Q5BLP8 95 aa10.41□□□□□ -0.74
CTDSP1-201ENST00000273062 DEFB130BP0DP73 79 aa10.41□□□□□ -0.74
CTDSP1-201ENST00000273062 DEFB130AP0DP74 79 aa10.41□□□□□ -0.74
CTDSP1-201ENST00000273062 IGHV4-30-4P0DP06 118 aa10.4□□□□□ -0.74
CTDSP1-201ENST00000273062 TEP1Q99973 2627 aaKnown RBP10.4□□□□□ -0.74
CTDSP1-201ENST00000273062 XAGE1AQ9HD64 81 aa10.4□□□□□ -0.74
CTDSP1-201ENST00000273062 ZNF73O43830 326 aaPredicted RBP10.39□□□□□ -0.75
CTDSP1-201ENST00000273062 LCA10Q71F78 164 aa10.39□□□□□ -0.75
CTDSP1-201ENST00000273062 CYP4F30PQ9H0H9 118 aa10.39□□□□□ -0.75
CTDSP1-201ENST00000273062 HIGD2BQ4VC39 106 aa10.38□□□□□ -0.75
CTDSP1-201ENST00000273062 HCG22E2RYF7 251 aa10.37□□□□□ -0.75
CTDSP1-201ENST00000273062 FLNBO75369 2602 aaKnown RBP10.37□□□□□ -0.75
CTDSP1-201ENST00000273062 DEFB4AO15263 64 aa10.37□□□□□ -0.75
CTDSP1-201ENST00000273062 APOC4P55056 127 aa10.37□□□□□ -0.75
CTDSP1-201ENST00000273062 CHCHD10Q8WYQ3 142 aaPredicted RBP10.37□□□□□ -0.75
CTDSP1-201ENST00000273062 ELOF1P60002 83 aaKnown RBP10.37□□□□□ -0.75
CTDSP1-201ENST00000273062 X6R8D5 127 aa10.36□□□□□ -0.75
CTDSP1-201ENST00000273062 H3BQ85 93 aa10.36□□□□□ -0.75
CTDSP1-201ENST00000273062 UBE2AP49459 152 aa10.35□□□□□ -0.75
CTDSP1-201ENST00000273062 PRR15LQ9BU68 103 aa10.35□□□□□ -0.75
CTDSP1-201ENST00000273062 A6NN06 94 aa10.34□□□□□ -0.75
CTDSP1-201ENST00000273062 F8P00451 2351 aa10.34□□□□□ -0.75
CTDSP1-201ENST00000273062 DEFB135Q30KP9 77 aa10.34□□□□□ -0.75
CTDSP1-201ENST00000273062 Q8N9P0 234 aaPredicted RBP10.34□□□□□ -0.75
CTDSP1-201ENST00000273062 ETDCA0A1B0GVM5 59 aa10.33□□□□□ -0.76
CTDSP1-201ENST00000273062 CYSRT1A8MQ03 144 aa10.32□□□□□ -0.76
CTDSP1-201ENST00000273062 A0A1B0GUV1 79 aa10.32□□□□□ -0.76
CTDSP1-201ENST00000273062 GYPEP15421 78 aa10.32□□□□□ -0.76
CTDSP1-201ENST00000273062 LYRM9A8MSI8 78 aa10.31□□□□□ -0.76
CTDSP1-201ENST00000273062 SPAG11BQ08648 103 aa10.3□□□□□ -0.76
CTDSP1-201ENST00000273062 K7EQZ3 153 aa10.3□□□□□ -0.76
CTDSP1-201ENST00000273062 DEFB105AQ8NG35 78 aa10.29□□□□□ -0.76
CTDSP1-201ENST00000273062 ANGP03950 147 aaKnown RBP10.28□□□□□ -0.76
CTDSP1-201ENST00000273062 DEFB116Q30KQ4 102 aa10.28□□□□□ -0.76
CTDSP1-201ENST00000273062 DSCR10P59022 87 aa10.27□□□□□ -0.76
CTDSP1-201ENST00000273062 ATP11AUNQ6ZP68 121 aa10.27□□□□□ -0.76
CTDSP1-201ENST00000273062 B9D2Q9BPU9 175 aa10.27□□□□□ -0.76
CTDSP1-201ENST00000273062 REG3AQ06141 175 aa10.27□□□□□ -0.77
CTDSP1-201ENST00000273062 PHF5AQ7RTV0 110 aaKnown RBP10.27□□□□□ -0.77
CTDSP1-201ENST00000273062 LINC00528Q8N1L1 170 aa10.27□□□□□ -0.77
CTDSP1-201ENST00000273062 A6NED7 52 aa10.26□□□□□ -0.77
CTDSP1-201ENST00000273062 A0A1W2PNM2 257 aa10.25□□□□□ -0.77
CTDSP1-201ENST00000273062 A0A0J9YWU9 116 aa10.25□□□□□ -0.77
CTDSP1-201ENST00000273062 C8orf87E5RJ46 101 aa10.24□□□□□ -0.77
CTDSP1-201ENST00000273062 NDUFS5O43920 106 aa10.24□□□□□ -0.77
CTDSP1-201ENST00000273062 KPRPQ5T749 579 aaPredicted RBP10.24□□□□□ -0.77
CTDSP1-201ENST00000273062 C6orf48Q9UBA6 75 aa10.24□□□□□ -0.77
CTDSP1-201ENST00000273062 ANK2Q01484 3957 aa10.22□□□□□ -0.77
CTDSP1-201ENST00000273062 FBN1P35555 2871 aaKnown RBP10.22□□□□□ -0.77
CTDSP1-201ENST00000273062 LIMD2Q9BT23 127 aa10.22□□□□□ -0.77
CTDSP1-201ENST00000273062 STAB1Q9NY15 2570 aa10.22□□□□□ -0.77
CTDSP1-201ENST00000273062 Q8N377 158 aa10.21□□□□□ -0.77
CTDSP1-201ENST00000273062 LINC00208Q96KT6 92 aa10.21□□□□□ -0.77
CTDSP1-201ENST00000273062 PKD1L1Q8TDX9 2849 aa10.21□□□□□ -0.78
CTDSP1-201ENST00000273062 PRO0255Q9UI72 69 aa10.2□□□□□ -0.78
CTDSP1-201ENST00000273062 VPREB1P12018 145 aa10.2□□□□□ -0.78
CTDSP1-201ENST00000273062 OXLD1Q5BKU9 147 aa10.2□□□□□ -0.78
CTDSP1-201ENST00000273062 C7orf65Q6ZTY9 151 aa10.2□□□□□ -0.78
CTDSP1-201ENST00000273062 Q8NAQ8 132 aa10.2□□□□□ -0.78
CTDSP1-201ENST00000273062 Q75L30 129 aa10.19□□□□□ -0.78
CTDSP1-201ENST00000273062 HTN3P15516 51 aa10.18□□□□□ -0.78
CTDSP1-201ENST00000273062 IGLV5-48A0A075B6I7 105 aa10.17□□□□□ -0.78
CTDSP1-201ENST00000273062 MOBPQ13875 183 aa10.17□□□□□ -0.78
CTDSP1-201ENST00000273062 NDUFB1O75438 58 aa10.17□□□□□ -0.78
CTDSP1-201ENST00000273062 WFDC13Q8IUB5 93 aa10.16□□□□□ -0.78
CTDSP1-201ENST00000273062 KRTAP10-11P60412 298 aa10.16□□□□□ -0.78
CTDSP1-201ENST00000273062 H3BS24 57 aa10.15□□□□□ -0.78
CTDSP1-201ENST00000273062 KRTAP24-1Q3LI83 254 aa10.15□□□□□ -0.79
CTDSP1-201ENST00000273062 MAST4O15021 2626 aa10.14□□□□□ -0.79
CTDSP1-201ENST00000273062 CDC42SE1Q9NRR8 79 aa10.14□□□□□ -0.79
CTDSP1-201ENST00000273062 CMYA5Q8N3K9 4069 aa10.14□□□□□ -0.79
CTDSP1-201ENST00000273062 C1orf137Q5JT78 98 aa10.13□□□□□ -0.79
CTDSP1-201ENST00000273062 A0A0G2JQZ4 141 aa10.12□□□□□ -0.79
CTDSP1-201ENST00000273062 A0A1W2PNN7 141 aa10.12□□□□□ -0.79
CTDSP1-201ENST00000273062 KCNQ1DNQ9H478 68 aa10.12□□□□□ -0.79
CTDSP1-201ENST00000273062 LOC101927531A0A1B0GV80 90 aa10.11□□□□□ -0.79
CTDSP1-201ENST00000273062 TENM3Q9P273 2699 aa10.11□□□□□ -0.79
CTDSP1-201ENST00000273062 MP68P56378 58 aa10.11□□□□□ -0.79
CTDSP1-201ENST00000273062 WFDC10BQ8IUB3 73 aa10.11□□□□□ -0.79
CTDSP1-201ENST00000273062 PRAC1Q96KF2 57 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms