RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 DEFB4AO15263 64 aa5.92□□□□□ -1.46
VAPB-201ENST00000265619 INSP01308 110 aa5.92□□□□□ -1.46
VAPB-201ENST00000265619 ODF3L2Q3SX64 289 aa5.92□□□□□ -1.46
VAPB-201ENST00000265619 KTN1-AS1Q86SY8 53 aa5.92□□□□□ -1.46
VAPB-201ENST00000265619 LINC00959A0A1B0GUT2 108 aa5.91□□□□□ -1.46
VAPB-201ENST00000265619 C9orf66Q5T8R8 295 aa5.91□□□□□ -1.46
VAPB-201ENST00000265619 TRGV4A0A0C4DH28 118 aa5.91□□□□□ -1.46
VAPB-201ENST00000265619 A8MUN3 132 aa5.91□□□□□ -1.46
VAPB-201ENST00000265619 IGLV10-54A0A075B6I4 117 aa5.9□□□□□ -1.46
VAPB-201ENST00000265619 Q1T7F1 81 aa5.9□□□□□ -1.46
VAPB-201ENST00000265619 LCE2DQ5TA82 110 aaPredicted RBP5.9□□□□□ -1.46
VAPB-201ENST00000265619 LINC00269Q8N2A0 174 aa5.9□□□□□ -1.46
VAPB-201ENST00000265619 KRTAP3-3Q9BYR6 98 aa5.9□□□□□ -1.46
VAPB-201ENST00000265619 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.46
VAPB-201ENST00000265619 KLK12Q9UKR0 248 aa5.9□□□□□ -1.47
VAPB-201ENST00000265619 ERC2-IT1O76042 136 aa5.89□□□□□ -1.47
VAPB-201ENST00000265619 MDFIQ99750 246 aa5.89□□□□□ -1.47
VAPB-201ENST00000265619 A0A0A0MQY5 61 aa5.89□□□□□ -1.47
VAPB-201ENST00000265619 J3QL48 77 aa5.89□□□□□ -1.47
VAPB-201ENST00000265619 NDUFS5O43920 106 aa5.88□□□□□ -1.47
VAPB-201ENST00000265619 DEFB130BP0DP73 79 aa5.88□□□□□ -1.47
VAPB-201ENST00000265619 DEFB130AP0DP74 79 aa5.88□□□□□ -1.47
VAPB-201ENST00000265619 KIAA0087Q14695 138 aa5.88□□□□□ -1.47
VAPB-201ENST00000265619 SMIM29Q86T20 159 aa5.88□□□□□ -1.47
VAPB-201ENST00000265619 C3orf84H3BNL1 204 aa5.87□□□□□ -1.47
VAPB-201ENST00000265619 TRBV6-8A0A0A6YYG3 113 aa5.87□□□□□ -1.47
VAPB-201ENST00000265619 SYCNQ0VAF6 134 aa5.87□□□□□ -1.47
VAPB-201ENST00000265619 HTN3P15516 51 aa5.87□□□□□ -1.47
VAPB-201ENST00000265619 Q8IZM0 81 aa5.86□□□□□ -1.47
VAPB-201ENST00000265619 ZNF73O43830 326 aaPredicted RBP5.86□□□□□ -1.47
VAPB-201ENST00000265619 DEFB135Q30KP9 77 aa5.86□□□□□ -1.47
VAPB-201ENST00000265619 Q5VV11 94 aa5.85□□□□□ -1.47
VAPB-201ENST00000265619 ST20-AS1Q8NBB2 130 aa5.84□□□□□ -1.47
VAPB-201ENST00000265619 C16orf90A8MZG2 172 aa5.83□□□□□ -1.48
VAPB-201ENST00000265619 PSCAO43653 123 aa5.83□□□□□ -1.48
VAPB-201ENST00000265619 IGLV1-51P01701 117 aa5.83□□□□□ -1.48
VAPB-201ENST00000265619 UNQ6190/PRO20217Q6UXQ8 127 aa5.83□□□□□ -1.48
VAPB-201ENST00000265619 LINC00588Q9Y4M8 146 aa5.83□□□□□ -1.48
VAPB-201ENST00000265619 KRTAP24-1Q3LI83 254 aa5.83□□□□□ -1.48
VAPB-201ENST00000265619 M0R378 163 aa5.83□□□□□ -1.48
VAPB-201ENST00000265619 IGLV6-57P01721 117 aa5.83□□□□□ -1.48
VAPB-201ENST00000265619 IGHV4-28A0A0C4DH34 117 aa5.82□□□□□ -1.48
VAPB-201ENST00000265619 GIG44P09565 113 aaPredicted RBP5.82□□□□□ -1.48
VAPB-201ENST00000265619 ZCCHC13Q8WW36 166 aaKnown RBP5.82□□□□□ -1.48
VAPB-201ENST00000265619 XAGE1AQ9HD64 81 aa5.82□□□□□ -1.48
VAPB-201ENST00000265619 PDE6GP18545 87 aa5.81□□□□□ -1.48
VAPB-201ENST00000265619 COX7BP24311 80 aa5.81□□□□□ -1.48
VAPB-201ENST00000265619 UBE2BP63146 152 aa5.81□□□□□ -1.48
VAPB-201ENST00000265619 SPTSSBQ8NFR3 76 aa5.81□□□□□ -1.48
VAPB-201ENST00000265619 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.81□□□□□ -1.48
VAPB-201ENST00000265619 CSMD3Q7Z407 3707 aa5.8□□□□□ -1.48
VAPB-201ENST00000265619 TENM3Q9P273 2699 aa5.8□□□□□ -1.48
VAPB-201ENST00000265619 LCE6AA0A183 80 aa5.8□□□□□ -1.48
VAPB-201ENST00000265619 LCA10Q71F78 164 aa5.8□□□□□ -1.48
VAPB-201ENST00000265619 ANGP03950 147 aaKnown RBP5.79□□□□□ -1.48
VAPB-201ENST00000265619 DIRC1Q969H9 104 aa5.79□□□□□ -1.48
VAPB-201ENST00000265619 IGHV4-30-4P0DP06 118 aa5.78□□□□□ -1.48
VAPB-201ENST00000265619 GYPEP15421 78 aa5.78□□□□□ -1.48
VAPB-201ENST00000265619 NKAPP1Q8N9T2 125 aa5.78□□□□□ -1.48
VAPB-201ENST00000265619 CHCHD10Q8WYQ3 142 aaPredicted RBP5.78□□□□□ -1.48
VAPB-201ENST00000265619 COX17Q14061 63 aa5.78□□□□□ -1.48
VAPB-201ENST00000265619 CHKB-CPT1BH3BT56 60 aa5.77□□□□□ -1.49
VAPB-201ENST00000265619 DEFB116Q30KQ4 102 aa5.77□□□□□ -1.49
VAPB-201ENST00000265619 DEFB105AQ8NG35 78 aa5.77□□□□□ -1.49
VAPB-201ENST00000265619 C19orf73Q9NVV2 129 aa5.76□□□□□ -1.49
VAPB-201ENST00000265619 ELOF1P60002 83 aaKnown RBP5.76□□□□□ -1.49
VAPB-201ENST00000265619 HCG22E2RYF7 251 aa5.75□□□□□ -1.49
VAPB-201ENST00000265619 MP68P56378 58 aa5.75□□□□□ -1.49
VAPB-201ENST00000265619 K7EQZ3 153 aa5.74□□□□□ -1.49
VAPB-201ENST00000265619 UBE2AP49459 152 aa5.74□□□□□ -1.49
VAPB-201ENST00000265619 HIGD2BQ4VC39 106 aa5.74□□□□□ -1.49
VAPB-201ENST00000265619 CSNK1G2-AS1Q8NCQ2 148 aa5.74□□□□□ -1.49
VAPB-201ENST00000265619 A6NN06 94 aa5.74□□□□□ -1.49
VAPB-201ENST00000265619 Q8N9P0 234 aaPredicted RBP5.74□□□□□ -1.49
VAPB-201ENST00000265619 PRR15LQ9BU68 103 aa5.74□□□□□ -1.49
VAPB-201ENST00000265619 CYP4F30PQ9H0H9 118 aa5.74□□□□□ -1.49
VAPB-201ENST00000265619 CMC4P56277 68 aaPredicted RBP5.73□□□□□ -1.49
VAPB-201ENST00000265619 DSCR10P59022 87 aa5.73□□□□□ -1.49
VAPB-201ENST00000265619 C16orf74Q96GX8 76 aa5.73□□□□□ -1.49
VAPB-201ENST00000265619 SPAG11BQ08648 103 aa5.73□□□□□ -1.49
VAPB-201ENST00000265619 A0A1W2PNM2 257 aa5.72□□□□□ -1.49
VAPB-201ENST00000265619 STAB2Q8WWQ8 2551 aa5.72□□□□□ -1.49
VAPB-201ENST00000265619 A0A0G2JQZ4 141 aa5.72□□□□□ -1.49
VAPB-201ENST00000265619 A0A1B0GUV1 79 aa5.72□□□□□ -1.49
VAPB-201ENST00000265619 A0A1W2PNN7 141 aa5.72□□□□□ -1.49
VAPB-201ENST00000265619 ZNF706Q9Y5V0 76 aaPredicted RBP5.72□□□□□ -1.49
VAPB-201ENST00000265619 REG3AQ06141 175 aa5.72□□□□□ -1.49
VAPB-201ENST00000265619 C6orf48Q9UBA6 75 aa5.72□□□□□ -1.49
VAPB-201ENST00000265619 ETDCA0A1B0GVM5 59 aa5.71□□□□□ -1.49
VAPB-201ENST00000265619 LINC00528Q8N1L1 170 aa5.71□□□□□ -1.49
VAPB-201ENST00000265619 KRTAP10-11P60412 298 aa5.71□□□□□ -1.5
VAPB-201ENST00000265619 C7orf65Q6ZTY9 151 aa5.71□□□□□ -1.5
VAPB-201ENST00000265619 Q8N377 158 aa5.7□□□□□ -1.5
VAPB-201ENST00000265619 KPRPQ5T749 579 aaPredicted RBP5.69□□□□□ -1.5
VAPB-201ENST00000265619 B9D2Q9BPU9 175 aa5.69□□□□□ -1.5
VAPB-201ENST00000265619 A0A0J9YWU9 116 aa5.68□□□□□ -1.5
VAPB-201ENST00000265619 X6R8D5 127 aa5.68□□□□□ -1.5
VAPB-201ENST00000265619 A6NED7 52 aa5.67□□□□□ -1.5
VAPB-201ENST00000265619 WFDC13Q8IUB5 93 aa5.67□□□□□ -1.5
VAPB-201ENST00000265619 H3BQ85 93 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 300.7 ms