RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ZNF861PO60384 105 aa11.73□□□□□ -0.53
COL5A3-201ENST00000264828 PRR34Q9NV39 138 aa11.73□□□□□ -0.53
COL5A3-201ENST00000264828 A0A0D9SG42 100 aa11.72□□□□□ -0.53
COL5A3-201ENST00000264828 K7EIL1 84 aa11.71□□□□□ -0.54
COL5A3-201ENST00000264828 KTN1-AS1Q86SY8 53 aa11.71□□□□□ -0.54
COL5A3-201ENST00000264828 SMR3BP02814 79 aaPredicted RBP11.68□□□□□ -0.54
COL5A3-201ENST00000264828 CD164Q04900 197 aa11.68□□□□□ -0.54
COL5A3-201ENST00000264828 GIG44P09565 113 aaPredicted RBP11.68□□□□□ -0.54
COL5A3-201ENST00000264828 LINC01554Q52M75 96 aa11.67□□□□□ -0.54
COL5A3-201ENST00000264828 TLN2Q9Y4G6 2542 aa11.67□□□□□ -0.54
COL5A3-201ENST00000264828 Q8N1X5 172 aa11.67□□□□□ -0.54
COL5A3-201ENST00000264828 C19orf73Q9NVV2 129 aa11.66□□□□□ -0.54
COL5A3-201ENST00000264828 GOLGB1Q14789 3259 aaKnown RBP11.65□□□□□ -0.54
COL5A3-201ENST00000264828 CASC10Q5T4H9 136 aa11.65□□□□□ -0.54
COL5A3-201ENST00000264828 LCA10Q71F78 164 aa11.64□□□□□ -0.55
COL5A3-201ENST00000264828 IGLV5-37A0A075B6J1 123 aa11.64□□□□□ -0.55
COL5A3-201ENST00000264828 A0A087WTM6 91 aa11.63□□□□□ -0.55
COL5A3-201ENST00000264828 A0A1W2PNM2 257 aa11.63□□□□□ -0.55
COL5A3-201ENST00000264828 USP9XQ93008 2570 aaPredicted RBP11.62□□□□□ -0.55
COL5A3-201ENST00000264828 ZFYVE26Q68DK2 2539 aa11.62□□□□□ -0.55
COL5A3-201ENST00000264828 PLA2G2DQ9UNK4 145 aa11.62□□□□□ -0.55
COL5A3-201ENST00000264828 TLX1NBP0CAT3 122 aa11.61□□□□□ -0.55
COL5A3-201ENST00000264828 IGLV5-48A0A075B6I7 105 aa11.61□□□□□ -0.55
COL5A3-201ENST00000264828 FAM104AQ969W3 186 aa11.61□□□□□ -0.55
COL5A3-201ENST00000264828 CDC42SE1Q9NRR8 79 aa11.6□□□□□ -0.55
COL5A3-201ENST00000264828 SETD2Q9BYW2 2564 aaPredicted RBP11.59□□□□□ -0.55
COL5A3-201ENST00000264828 IGLV7-43P04211 117 aa11.59□□□□□ -0.55
COL5A3-201ENST00000264828 PSORS1C2Q9UIG4 136 aa11.59□□□□□ -0.55
COL5A3-201ENST00000264828 PIEZO1Q92508 2521 aa11.57□□□□□ -0.56
COL5A3-201ENST00000264828 KRTAP1-3Q8IUG1 177 aa11.57□□□□□ -0.56
COL5A3-201ENST00000264828 SPRR4Q96PI1 79 aa11.57□□□□□ -0.56
COL5A3-201ENST00000264828 C9orf163Q8N9P6 203 aa11.56□□□□□ -0.56
COL5A3-201ENST00000264828 CENPFP49454 3210 aa11.55□□□□□ -0.56
COL5A3-201ENST00000264828 LINC00612Q8N6U2 182 aa11.55□□□□□ -0.56
COL5A3-201ENST00000264828 SPANXA2-OT1Q8N9U9 137 aa11.53□□□□□ -0.56
COL5A3-201ENST00000264828 PKD1L2Q7Z442 2459 aa11.52□□□□□ -0.57
COL5A3-201ENST00000264828 RBM12B-AS1Q9P1G2 102 aa11.51□□□□□ -0.57
COL5A3-201ENST00000264828 PRR26Q8N8Z3 221 aa11.47□□□□□ -0.57
COL5A3-201ENST00000264828 ZNF575Q86XF7 245 aa11.46□□□□□ -0.57
COL5A3-201ENST00000264828 ZNF462Q96JM2 2506 aa11.46□□□□□ -0.57
COL5A3-201ENST00000264828 KRTAP1-1Q07627 177 aa11.46□□□□□ -0.58
COL5A3-201ENST00000264828 ANKRD11Q6UB99 2663 aaPredicted RBP11.43□□□□□ -0.58
COL5A3-201ENST00000264828 CNBPP62633 177 aaKnown RBP11.43□□□□□ -0.58
COL5A3-201ENST00000264828 OCR1Q9BZK8 76 aa11.42□□□□□ -0.58
COL5A3-201ENST00000264828 USP9YO00507 2555 aaPredicted RBP11.41□□□□□ -0.58
COL5A3-201ENST00000264828 ANKRD17O75179 2603 aaKnown RBP11.41□□□□□ -0.58
COL5A3-201ENST00000264828 Q1T7F1 81 aa11.39□□□□□ -0.59
COL5A3-201ENST00000264828 CEP295Q9C0D2 2601 aa11.35□□□□□ -0.59
COL5A3-201ENST00000264828 LUZP6Q538Z0 58 aa11.34□□□□□ -0.59
COL5A3-201ENST00000264828 FAM229BQ4G0N7 80 aa11.32□□□□□ -0.6
COL5A3-201ENST00000264828 MTORP42345 2549 aa11.31□□□□□ -0.6
COL5A3-201ENST00000264828 POLQO75417 2590 aa11.31□□□□□ -0.6
COL5A3-201ENST00000264828 HRES1P13985 223 aa11.3□□□□□ -0.6
COL5A3-201ENST00000264828 IGLV7-46A0A075B6I9 117 aa11.28□□□□□ -0.6
COL5A3-201ENST00000264828 A0A1B0GU33 70 aa11.28□□□□□ -0.6
COL5A3-201ENST00000264828 Q75L30 129 aa11.25□□□□□ -0.61
COL5A3-201ENST00000264828 F8P00451 2351 aa11.25□□□□□ -0.61
COL5A3-201ENST00000264828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.24□□□□□ -0.61
COL5A3-201ENST00000264828 Q6ZSA8 131 aa11.24□□□□□ -0.61
COL5A3-201ENST00000264828 TNP2Q05952 138 aa11.23□□□□□ -0.61
COL5A3-201ENST00000264828 CAMK2N1Q7Z7J9 78 aa11.23□□□□□ -0.61
COL5A3-201ENST00000264828 ACANP16112 2415 aa11.22□□□□□ -0.61
COL5A3-201ENST00000264828 SPTBN4Q9H254 2564 aa11.22□□□□□ -0.61
COL5A3-201ENST00000264828 PRAC1Q96KF2 57 aa11.22□□□□□ -0.61
COL5A3-201ENST00000264828 CR1P17927 2039 aa11.2□□□□□ -0.62
COL5A3-201ENST00000264828 Q5XG85 94 aa11.19□□□□□ -0.62
COL5A3-201ENST00000264828 CYSTM1Q9H1C7 97 aa11.18□□□□□ -0.62
COL5A3-201ENST00000264828 CHD8Q9HCK8 2581 aa11.18□□□□□ -0.62
COL5A3-201ENST00000264828 Q8N9P0 234 aaPredicted RBP11.17□□□□□ -0.62
COL5A3-201ENST00000264828 DNAH12Q6ZR08 3092 aa11.17□□□□□ -0.62
COL5A3-201ENST00000264828 MMP24-AS1A0A0U1RRL7 71 aa11.16□□□□□ -0.62
COL5A3-201ENST00000264828 UTRNP46939 3433 aa11.15□□□□□ -0.63
COL5A3-201ENST00000264828 LINC00483Q53H64 154 aa11.14□□□□□ -0.63
COL5A3-201ENST00000264828 WIPF1O43516 503 aa11.14□□□□□ -0.63
COL5A3-201ENST00000264828 Q8NDZ9 215 aa11.13□□□□□ -0.63
COL5A3-201ENST00000264828 LINC01558Q9Y6Z2 57 aa11.13□□□□□ -0.63
COL5A3-201ENST00000264828 FP248Q71RG6 208 aaPredicted RBP11.1□□□□□ -0.63
COL5A3-201ENST00000264828 ZCCHC13Q8WW36 166 aaKnown RBP11.08□□□□□ -0.64
COL5A3-201ENST00000264828 S4R3F8 94 aa11.07□□□□□ -0.64
COL5A3-201ENST00000264828 M0R2T5 61 aa11.07□□□□□ -0.64
COL5A3-201ENST00000264828 CSAG1Q6PB30 78 aa11.06□□□□□ -0.64
COL5A3-201ENST00000264828 Q5VV11 94 aa11.05□□□□□ -0.64
COL5A3-201ENST00000264828 SPINK7P58062 85 aa11.05□□□□□ -0.64
COL5A3-201ENST00000264828 H3BS24 57 aa11.04□□□□□ -0.64
COL5A3-201ENST00000264828 Q5W150 140 aa11.03□□□□□ -0.64
COL5A3-201ENST00000264828 DMAC1Q96GE9 116 aa11.03□□□□□ -0.64
COL5A3-201ENST00000264828 FASNP49327 2511 aaKnown RBP10.97□□□□□ -0.65
COL5A3-201ENST00000264828 PLAC8Q9NZF1 115 aa10.95□□□□□ -0.66
COL5A3-201ENST00000264828 SPRR1AP35321 89 aa10.94□□□□□ -0.66
COL5A3-201ENST00000264828 LINC00472Q9H8W2 130 aa10.93□□□□□ -0.66
COL5A3-201ENST00000264828 OXTP01178 125 aa10.87□□□□□ -0.67
COL5A3-201ENST00000264828 R4GN34 69 aa10.85□□□□□ -0.67
COL5A3-201ENST00000264828 A0A0A0MQY5 61 aa10.83□□□□□ -0.68
COL5A3-201ENST00000264828 C5orf42Q9H799 3197 aa10.83□□□□□ -0.68
COL5A3-201ENST00000264828 BPTFQ12830 3046 aa10.83□□□□□ -0.68
COL5A3-201ENST00000264828 KRTAP26-1Q6PEX3 210 aa10.82□□□□□ -0.68
COL5A3-201ENST00000264828 SPRR1BP22528 89 aa10.8□□□□□ -0.68
COL5A3-201ENST00000264828 USP24Q9UPU5 2620 aa10.79□□□□□ -0.68
COL5A3-201ENST00000264828 ROMO1P60602 79 aa10.78□□□□□ -0.68
COL5A3-201ENST00000264828 KRTAP1-5Q9BYS1 174 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms