RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 PTPRBP23467 1997 aa9.98□□□□□ -0.81
NID1-201ENST00000264187 LINC00528Q8N1L1 170 aa9.97□□□□□ -0.81
NID1-201ENST00000264187 KCNQ1DNQ9H478 68 aa9.97□□□□□ -0.81
NID1-201ENST00000264187 Q8N1X5 172 aa9.97□□□□□ -0.81
NID1-201ENST00000264187 WWC2-AS2Q96NR7 200 aa9.97□□□□□ -0.81
NID1-201ENST00000264187 IGLV5-48A0A075B6I7 105 aa9.95□□□□□ -0.82
NID1-201ENST00000264187 Q8N377 158 aa9.94□□□□□ -0.82
NID1-201ENST00000264187 CDC42SE1Q9NRR8 79 aa9.93□□□□□ -0.82
NID1-201ENST00000264187 ZNF575Q86XF7 245 aa9.92□□□□□ -0.82
NID1-201ENST00000264187 C15orf56Q8N910 161 aa9.92□□□□□ -0.82
NID1-201ENST00000264187 ZNF861PO60384 105 aa9.91□□□□□ -0.82
NID1-201ENST00000264187 KTN1-AS1Q86SY8 53 aa9.9□□□□□ -0.82
NID1-201ENST00000264187 KLKP1Q107X0 134 aa9.89□□□□□ -0.83
NID1-201ENST00000264187 ANKRD11Q6UB99 2663 aaPredicted RBP9.89□□□□□ -0.83
NID1-201ENST00000264187 LCA10Q71F78 164 aa9.89□□□□□ -0.83
NID1-201ENST00000264187 CEP295Q9C0D2 2601 aa9.88□□□□□ -0.83
NID1-201ENST00000264187 H7BZZ5 65 aa9.88□□□□□ -0.83
NID1-201ENST00000264187 POLQO75417 2590 aa9.88□□□□□ -0.83
NID1-201ENST00000264187 COL27A1Q8IZC6 1860 aaPredicted RBP9.88□□□□□ -0.83
NID1-201ENST00000264187 FAM104AQ969W3 186 aa9.87□□□□□ -0.83
NID1-201ENST00000264187 RBM12B-AS1Q9P1G2 102 aa9.87□□□□□ -0.83
NID1-201ENST00000264187 LUZP6Q538Z0 58 aa9.86□□□□□ -0.83
NID1-201ENST00000264187 SPTBN4Q9H254 2564 aa9.86□□□□□ -0.83
NID1-201ENST00000264187 KRTAP10-11P60412 298 aa9.84□□□□□ -0.83
NID1-201ENST00000264187 CSNK1G2-AS1Q8NCQ2 148 aa9.82□□□□□ -0.84
NID1-201ENST00000264187 K7EIL1 84 aa9.81□□□□□ -0.84
NID1-201ENST00000264187 A0A087WTM6 91 aa9.81□□□□□ -0.84
NID1-201ENST00000264187 PSORS1C2Q9UIG4 136 aa9.79□□□□□ -0.84
NID1-201ENST00000264187 CASC10Q5T4H9 136 aa9.78□□□□□ -0.84
NID1-201ENST00000264187 IGLV7-43P04211 117 aa9.78□□□□□ -0.84
NID1-201ENST00000264187 PRR34Q9NV39 138 aa9.77□□□□□ -0.84
NID1-201ENST00000264187 CENPFP49454 3210 aa9.77□□□□□ -0.85
NID1-201ENST00000264187 PRR26Q8N8Z3 221 aa9.77□□□□□ -0.85
NID1-201ENST00000264187 FASNP49327 2511 aaKnown RBP9.77□□□□□ -0.85
NID1-201ENST00000264187 A0A1W2PNM2 257 aa9.76□□□□□ -0.85
NID1-201ENST00000264187 C9orf163Q8N9P6 203 aa9.75□□□□□ -0.85
NID1-201ENST00000264187 ANKRD17O75179 2603 aaKnown RBP9.74□□□□□ -0.85
NID1-201ENST00000264187 CAMK2N1Q7Z7J9 78 aa9.74□□□□□ -0.85
NID1-201ENST00000264187 SPRR4Q96PI1 79 aa9.73□□□□□ -0.85
NID1-201ENST00000264187 USP24Q9UPU5 2620 aa9.72□□□□□ -0.85
NID1-201ENST00000264187 GOLGB1Q14789 3259 aaKnown RBP9.71□□□□□ -0.86
NID1-201ENST00000264187 WIPF1O43516 503 aa9.7□□□□□ -0.86
NID1-201ENST00000264187 Q1T7F1 81 aa9.7□□□□□ -0.86
NID1-201ENST00000264187 GIG44P09565 113 aaPredicted RBP9.68□□□□□ -0.86
NID1-201ENST00000264187 EP400Q96L91 3159 aa9.67□□□□□ -0.86
NID1-201ENST00000264187 TLX1NBP0CAT3 122 aa9.67□□□□□ -0.86
NID1-201ENST00000264187 SPANXA2-OT1Q8N9U9 137 aa9.66□□□□□ -0.86
NID1-201ENST00000264187 C19orf73Q9NVV2 129 aa9.66□□□□□ -0.86
NID1-201ENST00000264187 COL4A2P08572 1712 aa9.66□□□□□ -0.86
NID1-201ENST00000264187 KRTAP10-3P60369 221 aa9.66□□□□□ -0.86
NID1-201ENST00000264187 PLA2G2DQ9UNK4 145 aa9.66□□□□□ -0.86
NID1-201ENST00000264187 Q6ZSA8 131 aa9.65□□□□□ -0.86
NID1-201ENST00000264187 M0R2T5 61 aa9.64□□□□□ -0.87
NID1-201ENST00000264187 LINC00612Q8N6U2 182 aa9.62□□□□□ -0.87
NID1-201ENST00000264187 A0A1B0GU33 70 aa9.62□□□□□ -0.87
NID1-201ENST00000264187 LINC00483Q53H64 154 aa9.61□□□□□ -0.87
NID1-201ENST00000264187 KLK9Q2XQG4 91 aa9.6□□□□□ -0.87
NID1-201ENST00000264187 MGAM2Q2M2H8 2515 aa9.6□□□□□ -0.87
NID1-201ENST00000264187 PRAC1Q96KF2 57 aa9.57□□□□□ -0.88
NID1-201ENST00000264187 HRES1P13985 223 aa9.56□□□□□ -0.88
NID1-201ENST00000264187 CR1P17927 2039 aa9.55□□□□□ -0.88
NID1-201ENST00000264187 CNBPP62633 177 aaKnown RBP9.54□□□□□ -0.88
NID1-201ENST00000264187 IGLV7-46A0A075B6I9 117 aa9.54□□□□□ -0.88
NID1-201ENST00000264187 OCR1Q9BZK8 76 aa9.54□□□□□ -0.88
NID1-201ENST00000264187 H3BS24 57 aa9.51□□□□□ -0.89
NID1-201ENST00000264187 TNP2Q05952 138 aa9.51□□□□□ -0.89
NID1-201ENST00000264187 FAM229BQ4G0N7 80 aa9.46□□□□□ -0.89
NID1-201ENST00000264187 Q8N9P0 234 aaPredicted RBP9.46□□□□□ -0.89
NID1-201ENST00000264187 BPTFQ12830 3046 aa9.46□□□□□ -0.9
NID1-201ENST00000264187 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.46□□□□□ -0.9
NID1-201ENST00000264187 EPG5Q9HCE0 2579 aa9.45□□□□□ -0.9
NID1-201ENST00000264187 Q75L30 129 aa9.43□□□□□ -0.9
NID1-201ENST00000264187 ATRQ13535 2644 aa9.43□□□□□ -0.9
NID1-201ENST00000264187 Q5XG85 94 aa9.42□□□□□ -0.9
NID1-201ENST00000264187 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
NID1-201ENST00000264187 A0A096LNT2 108 aa9.41□□□□□ -0.9
NID1-201ENST00000264187 UTRNP46939 3433 aa9.4□□□□□ -0.9
NID1-201ENST00000264187 S4R3F8 94 aa9.4□□□□□ -0.9
NID1-201ENST00000264187 A0A0A0MQY5 61 aa9.4□□□□□ -0.9
NID1-201ENST00000264187 FLG2Q5D862 2391 aaPredicted RBP9.39□□□□□ -0.91
NID1-201ENST00000264187 PCSK5Q92824 1860 aa9.38□□□□□ -0.91
NID1-201ENST00000264187 FLNBO75369 2602 aaKnown RBP9.38□□□□□ -0.91
NID1-201ENST00000264187 SPINK7P58062 85 aa9.38□□□□□ -0.91
NID1-201ENST00000264187 DMAC1Q96GE9 116 aa9.37□□□□□ -0.91
NID1-201ENST00000264187 ZCCHC13Q8WW36 166 aaKnown RBP9.36□□□□□ -0.91
NID1-201ENST00000264187 MMP24-AS1A0A0U1RRL7 71 aa9.34□□□□□ -0.91
NID1-201ENST00000264187 LINC01558Q9Y6Z2 57 aa9.34□□□□□ -0.91
NID1-201ENST00000264187 R4GN34 69 aa9.34□□□□□ -0.91
NID1-201ENST00000264187 HECTD1Q9ULT8 2610 aa9.33□□□□□ -0.92
NID1-201ENST00000264187 FP248Q71RG6 208 aaPredicted RBP9.33□□□□□ -0.92
NID1-201ENST00000264187 CYSTM1Q9H1C7 97 aa9.31□□□□□ -0.92
NID1-201ENST00000264187 MAST4O15021 2626 aa9.3□□□□□ -0.92
NID1-201ENST00000264187 Q5W150 140 aa9.28□□□□□ -0.92
NID1-201ENST00000264187 Q5VV11 94 aa9.27□□□□□ -0.93
NID1-201ENST00000264187 Q8NDZ9 215 aa9.23□□□□□ -0.93
NID1-201ENST00000264187 PRRC2CQ9Y520 2896 aaKnown RBP9.22□□□□□ -0.93
NID1-201ENST00000264187 KRTAP1-3Q8IUG1 177 aa9.21□□□□□ -0.94
NID1-201ENST00000264187 KRTAP1-1Q07627 177 aa9.18□□□□□ -0.94
NID1-201ENST00000264187 M0QZ58 72 aa9.17□□□□□ -0.94
NID1-201ENST00000264187 RPL37P61927 97 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms