RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 KLK9Q2XQG4 91 aa7.04□□□□□ -1.28
SLC6A4-201ENST00000261707 COL27A1Q8IZC6 1860 aaPredicted RBP7.03□□□□□ -1.28
SLC6A4-201ENST00000261707 A0A1W2PNM2 257 aa7.03□□□□□ -1.28
SLC6A4-201ENST00000261707 KRTAP10-11P60412 298 aa7.03□□□□□ -1.28
SLC6A4-201ENST00000261707 C9orf163Q8N9P6 203 aa7.03□□□□□ -1.28
SLC6A4-201ENST00000261707 A0A0D9SG42 100 aa7.02□□□□□ -1.28
SLC6A4-201ENST00000261707 Q8NAQ8 132 aa7.02□□□□□ -1.29
SLC6A4-201ENST00000261707 CYSTM1Q9H1C7 97 aa7.02□□□□□ -1.29
SLC6A4-201ENST00000261707 A0A087WTM6 91 aa7.02□□□□□ -1.29
SLC6A4-201ENST00000261707 PRR26Q8N8Z3 221 aa7□□□□□ -1.29
SLC6A4-201ENST00000261707 C15orf56Q8N910 161 aa6.99□□□□□ -1.29
SLC6A4-201ENST00000261707 BDP1A6H8Y1 2624 aa6.99□□□□□ -1.29
SLC6A4-201ENST00000261707 TTC28Q96AY4 2481 aa6.99□□□□□ -1.29
SLC6A4-201ENST00000261707 ACACBO00763 2458 aa6.99□□□□□ -1.29
SLC6A4-201ENST00000261707 IGLV7-46A0A075B6I9 117 aa6.99□□□□□ -1.29
SLC6A4-201ENST00000261707 ZNF575Q86XF7 245 aa6.98□□□□□ -1.29
SLC6A4-201ENST00000261707 PLA2G2DQ9UNK4 145 aa6.97□□□□□ -1.29
SLC6A4-201ENST00000261707 Q8N9P0 234 aaPredicted RBP6.97□□□□□ -1.29
SLC6A4-201ENST00000261707 LINC01558Q9Y6Z2 57 aa6.97□□□□□ -1.29
SLC6A4-201ENST00000261707 PRR34Q9NV39 138 aa6.96□□□□□ -1.3
SLC6A4-201ENST00000261707 Q5VV11 94 aa6.96□□□□□ -1.3
SLC6A4-201ENST00000261707 Q8N1X5 172 aa6.96□□□□□ -1.3
SLC6A4-201ENST00000261707 ZNF861PO60384 105 aa6.95□□□□□ -1.3
SLC6A4-201ENST00000261707 CAMK2N1Q7Z7J9 78 aa6.95□□□□□ -1.3
SLC6A4-201ENST00000261707 IGLV5-48A0A075B6I7 105 aa6.95□□□□□ -1.3
SLC6A4-201ENST00000261707 CSAG1Q6PB30 78 aa6.94□□□□□ -1.3
SLC6A4-201ENST00000261707 CASC10Q5T4H9 136 aa6.94□□□□□ -1.3
SLC6A4-201ENST00000261707 Q5VSD8 79 aa6.94□□□□□ -1.3
SLC6A4-201ENST00000261707 TLX1NBP0CAT3 122 aa6.93□□□□□ -1.3
SLC6A4-201ENST00000261707 OXTP01178 125 aa6.92□□□□□ -1.3
SLC6A4-201ENST00000261707 IGLV7-43P04211 117 aa6.91□□□□□ -1.3
SLC6A4-201ENST00000261707 PSORS1C2Q9UIG4 136 aa6.89□□□□□ -1.31
SLC6A4-201ENST00000261707 A0A1B0GU33 70 aa6.89□□□□□ -1.31
SLC6A4-201ENST00000261707 A0A0A0MQY5 61 aa6.88□□□□□ -1.31
SLC6A4-201ENST00000261707 ANAPC11Q9NYG5 84 aa6.88□□□□□ -1.31
SLC6A4-201ENST00000261707 LINC00483Q53H64 154 aa6.88□□□□□ -1.31
SLC6A4-201ENST00000261707 SPINK7P58062 85 aa6.87□□□□□ -1.31
SLC6A4-201ENST00000261707 SPRR4Q96PI1 79 aa6.87□□□□□ -1.31
SLC6A4-201ENST00000261707 LRRK2Q5S007 2527 aa6.87□□□□□ -1.31
SLC6A4-201ENST00000261707 DMAC1Q96GE9 116 aa6.86□□□□□ -1.31
SLC6A4-201ENST00000261707 HRES1P13985 223 aa6.86□□□□□ -1.31
SLC6A4-201ENST00000261707 CNBPP62633 177 aaKnown RBP6.85□□□□□ -1.31
SLC6A4-201ENST00000261707 C19orf73Q9NVV2 129 aa6.85□□□□□ -1.31
SLC6A4-201ENST00000261707 DNAH12Q6ZR08 3092 aa6.85□□□□□ -1.31
SLC6A4-201ENST00000261707 CENPFP49454 3210 aa6.85□□□□□ -1.31
SLC6A4-201ENST00000261707 TNP2Q05952 138 aa6.84□□□□□ -1.32
SLC6A4-201ENST00000261707 NAV2Q8IVL1 2488 aa6.83□□□□□ -1.32
SLC6A4-201ENST00000261707 A0A096LNT2 108 aa6.83□□□□□ -1.32
SLC6A4-201ENST00000261707 USP34Q70CQ2 3546 aa6.83□□□□□ -1.32
SLC6A4-201ENST00000261707 GIG44P09565 113 aaPredicted RBP6.83□□□□□ -1.32
SLC6A4-201ENST00000261707 LINC00612Q8N6U2 182 aa6.82□□□□□ -1.32
SLC6A4-201ENST00000261707 COL4A2P08572 1712 aa6.82□□□□□ -1.32
SLC6A4-201ENST00000261707 SEC61BP60468 96 aaKnown RBP6.82□□□□□ -1.32
SLC6A4-201ENST00000261707 CACNA1AO00555 2505 aa6.81□□□□□ -1.32
SLC6A4-201ENST00000261707 CEP350Q5VT06 3117 aa6.81□□□□□ -1.32
SLC6A4-201ENST00000261707 KRTAP10-3P60369 221 aa6.77□□□□□ -1.32
SLC6A4-201ENST00000261707 MMP24-AS1A0A0U1RRL7 71 aa6.77□□□□□ -1.33
SLC6A4-201ENST00000261707 PLAC4Q8WY50 150 aa6.76□□□□□ -1.33
SLC6A4-201ENST00000261707 MYO9AB2RTY4 2548 aa6.74□□□□□ -1.33
SLC6A4-201ENST00000261707 PCSK5Q92824 1860 aa6.74□□□□□ -1.33
SLC6A4-201ENST00000261707 ASB16-AS1Q495Z4 193 aa6.7□□□□□ -1.34
SLC6A4-201ENST00000261707 FN1P02751 2386 aaKnown RBP6.7□□□□□ -1.34
SLC6A4-201ENST00000261707 MYO18BQ8IUG5 2567 aa6.7□□□□□ -1.34
SLC6A4-201ENST00000261707 BRCA2P51587 3418 aa6.69□□□□□ -1.34
SLC6A4-201ENST00000261707 S4R3F8 94 aa6.69□□□□□ -1.34
SLC6A4-201ENST00000261707 ROMO1P60602 79 aa6.68□□□□□ -1.34
SLC6A4-201ENST00000261707 LCE6AA0A183 80 aa6.68□□□□□ -1.34
SLC6A4-201ENST00000261707 NCOR2Q9Y618 2525 aa6.68□□□□□ -1.34
SLC6A4-201ENST00000261707 KRTAP16-1A8MUX0 517 aa6.67□□□□□ -1.34
SLC6A4-201ENST00000261707 F8P00451 2351 aa6.67□□□□□ -1.34
SLC6A4-201ENST00000261707 HTTP42858 3142 aa6.67□□□□□ -1.34
SLC6A4-201ENST00000261707 CDH23Q9H251 3354 aa6.66□□□□□ -1.34
SLC6A4-201ENST00000261707 ZFYVE26Q68DK2 2539 aa6.66□□□□□ -1.34
SLC6A4-201ENST00000261707 Q8NDZ9 215 aa6.66□□□□□ -1.34
SLC6A4-201ENST00000261707 ZNF462Q96JM2 2506 aa6.65□□□□□ -1.34
SLC6A4-201ENST00000261707 Q5W150 140 aa6.65□□□□□ -1.34
SLC6A4-201ENST00000261707 JMJD1CQ15652 2540 aa6.65□□□□□ -1.35
SLC6A4-201ENST00000261707 PIEZO2Q9H5I5 2752 aa6.64□□□□□ -1.35
SLC6A4-201ENST00000261707 CR1P17927 2039 aa6.63□□□□□ -1.35
SLC6A4-201ENST00000261707 LAMA3Q16787 3333 aa6.62□□□□□ -1.35
SLC6A4-201ENST00000261707 LINC00472Q9H8W2 130 aa6.62□□□□□ -1.35
SLC6A4-201ENST00000261707 ZCCHC13Q8WW36 166 aaKnown RBP6.61□□□□□ -1.35
SLC6A4-201ENST00000261707 A6NN06 94 aa6.61□□□□□ -1.35
SLC6A4-201ENST00000261707 PIEZO1Q92508 2521 aa6.61□□□□□ -1.35
SLC6A4-201ENST00000261707 IGF2RP11717 2491 aa6.6□□□□□ -1.35
SLC6A4-201ENST00000261707 BPTFQ12830 3046 aa6.6□□□□□ -1.35
SLC6A4-201ENST00000261707 RPL37P61927 97 aaKnown RBP6.59□□□□□ -1.35
SLC6A4-201ENST00000261707 R4GN34 69 aa6.58□□□□□ -1.36
SLC6A4-201ENST00000261707 SPRR1AP35321 89 aa6.58□□□□□ -1.36
SLC6A4-201ENST00000261707 H1FX-AS1Q4G0G2 97 aa6.57□□□□□ -1.36
SLC6A4-201ENST00000261707 MKI67P46013 3256 aaKnown RBP6.53□□□□□ -1.36
SLC6A4-201ENST00000261707 TLN1Q9Y490 2541 aaKnown RBP6.53□□□□□ -1.36
SLC6A4-201ENST00000261707 KRTAP26-1Q6PEX3 210 aa6.53□□□□□ -1.36
SLC6A4-201ENST00000261707 KRTAP25-1Q3LHN0 102 aa6.52□□□□□ -1.37
SLC6A4-201ENST00000261707 SPATA8Q6RVD6 105 aa6.52□□□□□ -1.37
SLC6A4-201ENST00000261707 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.52□□□□□ -1.37
SLC6A4-201ENST00000261707 SPRR1BP22528 89 aa6.5□□□□□ -1.37
SLC6A4-201ENST00000261707 Q6ZR54 194 aa6.5□□□□□ -1.37
SLC6A4-201ENST00000261707 LAMA2P24043 3122 aaKnown RBP6.5□□□□□ -1.37
SLC6A4-201ENST00000261707 KRTAP1-3Q8IUG1 177 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms