RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 C6orf48Q9UBA6 75 aa4.8□□□□□ -1.64
CSDE1-201ENST00000261443 TRRAPQ9Y4A5 3859 aa4.8□□□□□ -1.64
CSDE1-201ENST00000261443 FLNBO75369 2602 aaKnown RBP4.8□□□□□ -1.64
CSDE1-201ENST00000261443 LCE6AA0A183 80 aa4.8□□□□□ -1.64
CSDE1-201ENST00000261443 LINC00528Q8N1L1 170 aa4.8□□□□□ -1.64
CSDE1-201ENST00000261443 GVQW2A0A096LPI5 108 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-201ENST00000261443 HIVEP1P15822 2718 aa4.79□□□□□ -1.64
CSDE1-201ENST00000261443 PRR4Q16378 134 aa4.79□□□□□ -1.64
CSDE1-201ENST00000261443 KRTAP1-3Q8IUG1 177 aa4.79□□□□□ -1.64
CSDE1-201ENST00000261443 DEFB105AQ8NG35 78 aa4.79□□□□□ -1.64
CSDE1-201ENST00000261443 ESM1Q9NQ30 184 aa4.79□□□□□ -1.64
CSDE1-201ENST00000261443 VPREB1P12018 145 aa4.79□□□□□ -1.64
CSDE1-201ENST00000261443 M0R378 163 aa4.78□□□□□ -1.64
CSDE1-201ENST00000261443 ZCCHC13Q8WW36 166 aaKnown RBP4.78□□□□□ -1.64
CSDE1-201ENST00000261443 TENM1Q9UKZ4 2725 aa4.78□□□□□ -1.64
CSDE1-201ENST00000261443 ETDCA0A1B0GVM5 59 aa4.78□□□□□ -1.64
CSDE1-201ENST00000261443 CD164Q04900 197 aa4.78□□□□□ -1.64
CSDE1-201ENST00000261443 NBEAL1Q6ZS30 2694 aa4.78□□□□□ -1.64
CSDE1-201ENST00000261443 A8MUN3 132 aa4.78□□□□□ -1.64
CSDE1-201ENST00000261443 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-201ENST00000261443 IGLV1-51P01701 117 aa4.77□□□□□ -1.65
CSDE1-201ENST00000261443 KPRPQ5T749 579 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-201ENST00000261443 PKD1L1Q8TDX9 2849 aa4.77□□□□□ -1.65
CSDE1-201ENST00000261443 PSCAO43653 123 aa4.77□□□□□ -1.65
CSDE1-201ENST00000261443 CYP4F30PQ9H0H9 118 aa4.77□□□□□ -1.65
CSDE1-201ENST00000261443 OTOGQ6ZRI0 2925 aa4.77□□□□□ -1.65
CSDE1-201ENST00000261443 SYCNQ0VAF6 134 aa4.76□□□□□ -1.65
CSDE1-201ENST00000261443 UNC79Q9P2D8 2635 aa4.76□□□□□ -1.65
CSDE1-201ENST00000261443 Q8N377 158 aa4.76□□□□□ -1.65
CSDE1-201ENST00000261443 CAMK2N2Q96S95 79 aa4.76□□□□□ -1.65
CSDE1-201ENST00000261443 RETNQ9HD89 108 aa4.76□□□□□ -1.65
CSDE1-201ENST00000261443 FBN1P35555 2871 aaKnown RBP4.75□□□□□ -1.65
CSDE1-201ENST00000261443 IGLV5-48A0A075B6I7 105 aa4.75□□□□□ -1.65
CSDE1-201ENST00000261443 X6R8D5 127 aa4.75□□□□□ -1.65
CSDE1-201ENST00000261443 ANK2Q01484 3957 aa4.75□□□□□ -1.65
CSDE1-201ENST00000261443 A8MU10 97 aa4.75□□□□□ -1.65
CSDE1-201ENST00000261443 DEFB4AO15263 64 aa4.75□□□□□ -1.65
CSDE1-201ENST00000261443 ST20-AS1Q8NBB2 130 aa4.75□□□□□ -1.65
CSDE1-201ENST00000261443 PRR34Q9NV39 138 aa4.74□□□□□ -1.65
CSDE1-201ENST00000261443 F8P00451 2351 aa4.74□□□□□ -1.65
CSDE1-201ENST00000261443 A0A1B0GW54 56 aa4.74□□□□□ -1.65
CSDE1-201ENST00000261443 A0A1W2PNM2 257 aa4.74□□□□□ -1.65
CSDE1-201ENST00000261443 K7EQZ3 153 aa4.74□□□□□ -1.65
CSDE1-201ENST00000261443 NDUFB1O75438 58 aa4.74□□□□□ -1.65
CSDE1-201ENST00000261443 UBE2BP63146 152 aa4.74□□□□□ -1.65
CSDE1-201ENST00000261443 LYRM9A8MSI8 78 aa4.73□□□□□ -1.65
CSDE1-201ENST00000261443 DSCR10P59022 87 aa4.73□□□□□ -1.65
CSDE1-201ENST00000261443 EGFEM1PQ0D2K5 195 aa4.73□□□□□ -1.65
CSDE1-201ENST00000261443 LELP1Q5T871 98 aa4.73□□□□□ -1.65
CSDE1-201ENST00000261443 Q5VV11 94 aa4.73□□□□□ -1.65
CSDE1-201ENST00000261443 MRPL55Q7Z7F7 128 aaKnown RBP4.73□□□□□ -1.65
CSDE1-201ENST00000261443 DNAJC9-AS1A6NH13 148 aa4.73□□□□□ -1.65
CSDE1-201ENST00000261443 C1orf137Q5JT78 98 aa4.73□□□□□ -1.65
CSDE1-201ENST00000261443 NOTCH1P46531 2555 aa4.72□□□□□ -1.65
CSDE1-201ENST00000261443 CHKB-CPT1BH3BT56 60 aa4.72□□□□□ -1.65
CSDE1-201ENST00000261443 CMYA5Q8N3K9 4069 aa4.72□□□□□ -1.65
CSDE1-201ENST00000261443 HCG22E2RYF7 251 aa4.72□□□□□ -1.65
CSDE1-201ENST00000261443 HTN3P15516 51 aa4.72□□□□□ -1.65
CSDE1-201ENST00000261443 UBE2AP49459 152 aa4.72□□□□□ -1.65
CSDE1-201ENST00000261443 B9D2Q9BPU9 175 aa4.72□□□□□ -1.65
CSDE1-201ENST00000261443 Q8NBF4 154 aa4.71□□□□□ -1.66
CSDE1-201ENST00000261443 MP68P56378 58 aa4.7□□□□□ -1.66
CSDE1-201ENST00000261443 KTN1-AS1Q86SY8 53 aa4.7□□□□□ -1.66
CSDE1-201ENST00000261443 NKAPP1Q8N9T2 125 aa4.7□□□□□ -1.66
CSDE1-201ENST00000261443 SPTSSBQ8NFR3 76 aa4.7□□□□□ -1.66
CSDE1-201ENST00000261443 KCNQ1DNQ9H478 68 aa4.7□□□□□ -1.66
CSDE1-201ENST00000261443 LINC00588Q9Y4M8 146 aa4.7□□□□□ -1.66
CSDE1-201ENST00000261443 C16orf90A8MZG2 172 aa4.7□□□□□ -1.66
CSDE1-201ENST00000261443 SPRR4Q96PI1 79 aa4.69□□□□□ -1.66
CSDE1-201ENST00000261443 LIMD2Q9BT23 127 aa4.69□□□□□ -1.66
CSDE1-201ENST00000261443 DHRS4-AS1Q9P1J3 65 aa4.69□□□□□ -1.66
CSDE1-201ENST00000261443 KRTAP1-1Q07627 177 aa4.69□□□□□ -1.66
CSDE1-201ENST00000261443 DEFB135Q30KP9 77 aa4.69□□□□□ -1.66
CSDE1-201ENST00000261443 DEFB116Q30KQ4 102 aa4.69□□□□□ -1.66
CSDE1-201ENST00000261443 Q8N9P0 234 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-201ENST00000261443 LINC00208Q96KT6 92 aa4.69□□□□□ -1.66
CSDE1-201ENST00000261443 PRR15LQ9BU68 103 aa4.69□□□□□ -1.66
CSDE1-201ENST00000261443 RBM12B-AS1Q9P1G2 102 aa4.68□□□□□ -1.66
CSDE1-201ENST00000261443 MAST4O15021 2626 aa4.68□□□□□ -1.66
CSDE1-201ENST00000261443 TNP2Q05952 138 aa4.68□□□□□ -1.66
CSDE1-201ENST00000261443 WFDC13Q8IUB5 93 aa4.68□□□□□ -1.66
CSDE1-201ENST00000261443 C7orf33Q8WU49 177 aa4.68□□□□□ -1.66
CSDE1-201ENST00000261443 Q6ZRX8 168 aa4.67□□□□□ -1.66
CSDE1-201ENST00000261443 STAB1Q9NY15 2570 aa4.67□□□□□ -1.66
CSDE1-201ENST00000261443 CSMD3Q7Z407 3707 aa4.67□□□□□ -1.66
CSDE1-201ENST00000261443 BAHCC1Q9P281 2608 aa4.67□□□□□ -1.66
CSDE1-201ENST00000261443 DEFB113Q30KQ7 82 aa4.67□□□□□ -1.66
CSDE1-201ENST00000261443 SERTAD4-AS1Q5TG53 156 aa4.67□□□□□ -1.66
CSDE1-201ENST00000261443 C15orf56Q8N910 161 aa4.67□□□□□ -1.66
CSDE1-201ENST00000261443 Q9BRP9 147 aa4.67□□□□□ -1.66
CSDE1-201ENST00000261443 RPL37AP8A6NKH3 93 aa4.67□□□□□ -1.66
CSDE1-201ENST00000261443 WFDC10BQ8IUB3 73 aa4.67□□□□□ -1.66
CSDE1-201ENST00000261443 COL6A5A8TX70 2615 aa4.66□□□□□ -1.66
CSDE1-201ENST00000261443 A6NED7 52 aa4.66□□□□□ -1.66
CSDE1-201ENST00000261443 ATP11AUNQ6ZP68 121 aa4.66□□□□□ -1.66
CSDE1-201ENST00000261443 SPANXA2-OT1Q8N9U9 137 aa4.66□□□□□ -1.66
CSDE1-201ENST00000261443 KRTAP26-1Q6PEX3 210 aa4.65□□□□□ -1.67
CSDE1-201ENST00000261443 LCA10Q71F78 164 aa4.65□□□□□ -1.67
CSDE1-201ENST00000261443 H0Y9P7 68 aa4.65□□□□□ -1.67
CSDE1-201ENST00000261443 NDUFS5O43920 106 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms