RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TSTD3H0UI37 97 aa8.6□□□□□ -1.03
VPS25-201ENST00000253794 ZNF861PO60384 105 aa8.6□□□□□ -1.03
VPS25-201ENST00000253794 OR13C6PQ8NH95 151 aa8.6□□□□□ -1.03
VPS25-201ENST00000253794 A0A0B4J2C4 111 aa8.59□□□□□ -1.03
VPS25-201ENST00000253794 TMEM238LA0A1B0GVL6 79 aa8.59□□□□□ -1.03
VPS25-201ENST00000253794 A6NJY4 79 aa8.59□□□□□ -1.03
VPS25-201ENST00000253794 RPL28P46779 137 aaKnown RBP8.59□□□□□ -1.03
VPS25-201ENST00000253794 ZNF73O43830 326 aaPredicted RBP8.58□□□□□ -1.04
VPS25-201ENST00000253794 CFC1BP0CG36 223 aa8.58□□□□□ -1.04
VPS25-201ENST00000253794 CFC1P0CG37 223 aa8.58□□□□□ -1.04
VPS25-201ENST00000253794 FXYD2P54710 66 aa8.58□□□□□ -1.04
VPS25-201ENST00000253794 MYCBP2O75592 4640 aa8.57□□□□□ -1.04
VPS25-201ENST00000253794 A6NDN8 102 aa8.57□□□□□ -1.04
VPS25-201ENST00000253794 TRBV7-6A0A0J9YX20 115 aa8.56□□□□□ -1.04
VPS25-201ENST00000253794 A0A1B0GWB2 263 aa8.56□□□□□ -1.04
VPS25-201ENST00000253794 B5MCH6 92 aa8.56□□□□□ -1.04
VPS25-201ENST00000253794 INAFM2P0DMQ5 153 aa8.56□□□□□ -1.04
VPS25-201ENST00000253794 FAM19A1Q7Z5A9 133 aa8.56□□□□□ -1.04
VPS25-201ENST00000253794 DIRC1Q969H9 104 aa8.56□□□□□ -1.04
VPS25-201ENST00000253794 ETDCA0A1B0GVM5 59 aa8.55□□□□□ -1.04
VPS25-201ENST00000253794 UBE2AP49459 152 aa8.55□□□□□ -1.04
VPS25-201ENST00000253794 FAT3Q8TDW7 4589 aa8.54□□□□□ -1.04
VPS25-201ENST00000253794 PRLHP81277 87 aa8.54□□□□□ -1.04
VPS25-201ENST00000253794 Q6ZRX8 168 aa8.54□□□□□ -1.04
VPS25-201ENST00000253794 SMIM11BQ8TCY0 68 aa8.54□□□□□ -1.04
VPS25-201ENST00000253794 RPL13AP40429 203 aaKnown RBP8.53□□□□□ -1.04
VPS25-201ENST00000253794 ELOF1P60002 83 aaKnown RBP8.53□□□□□ -1.04
VPS25-201ENST00000253794 CTAG1AP78358 180 aa8.53□□□□□ -1.04
VPS25-201ENST00000253794 C6orf99Q4VX62 202 aa8.53□□□□□ -1.04
VPS25-201ENST00000253794 BVES-AS1Q5T3Y7 98 aa8.53□□□□□ -1.04
VPS25-201ENST00000253794 RAB37Q96AX2 223 aa8.53□□□□□ -1.04
VPS25-201ENST00000253794 HINT1P49773 126 aaPredicted RBP8.52□□□□□ -1.05
VPS25-201ENST00000253794 LRP1Q07954 4544 aaKnown RBP8.52□□□□□ -1.05
VPS25-201ENST00000253794 M0R143 59 aa8.51□□□□□ -1.05
VPS25-201ENST00000253794 SMCR5Q8TEV8 140 aa8.51□□□□□ -1.05
VPS25-201ENST00000253794 Q9BRP9 147 aa8.51□□□□□ -1.05
VPS25-201ENST00000253794 PRO1854Q9UHT4 67 aa8.51□□□□□ -1.05
VPS25-201ENST00000253794 NHP2Q9NX24 153 aaKnown RBP8.5□□□□□ -1.05
VPS25-201ENST00000253794 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
VPS25-201ENST00000253794 PCLOQ9Y6V0 5065 aa8.5□□□□□ -1.05
VPS25-201ENST00000253794 COX7BP24311 80 aa8.49□□□□□ -1.05
VPS25-201ENST00000253794 KRTAP1-4P0C5Y4 121 aa8.48□□□□□ -1.05
VPS25-201ENST00000253794 HIGD2AQ9BW72 106 aa8.48□□□□□ -1.05
VPS25-201ENST00000253794 DHRS4-AS1Q9P1J3 65 aa8.48□□□□□ -1.05
VPS25-201ENST00000253794 OXTP01178 125 aa8.47□□□□□ -1.05
VPS25-201ENST00000253794 K7ERJ3 54 aa8.46□□□□□ -1.06
VPS25-201ENST00000253794 KRTAP29-1A8MX34 341 aaPredicted RBP8.45□□□□□ -1.06
VPS25-201ENST00000253794 VAMP3Q15836 100 aa8.45□□□□□ -1.06
VPS25-201ENST00000253794 LINC01600Q96MT4 127 aa8.45□□□□□ -1.06
VPS25-201ENST00000253794 ERC2-IT1O76042 136 aa8.44□□□□□ -1.06
VPS25-201ENST00000253794 SPRR4Q96PI1 79 aa8.44□□□□□ -1.06
VPS25-201ENST00000253794 ZNF706Q9Y5V0 76 aaPredicted RBP8.44□□□□□ -1.06
VPS25-201ENST00000253794 TNXBP22105 4242 aa8.43□□□□□ -1.06
VPS25-201ENST00000253794 H7C2G1 150 aa8.43□□□□□ -1.06
VPS25-201ENST00000253794 H0YGX0 51 aa8.42□□□□□ -1.06
VPS25-201ENST00000253794 TSPAN13O95857 204 aa8.42□□□□□ -1.06
VPS25-201ENST00000253794 FAM229BQ4G0N7 80 aa8.42□□□□□ -1.06
VPS25-201ENST00000253794 LINC00483Q53H64 154 aa8.42□□□□□ -1.06
VPS25-201ENST00000253794 LINC00575Q6W349 94 aa8.42□□□□□ -1.06
VPS25-201ENST00000253794 Q1RN00 199 aa8.41□□□□□ -1.06
VPS25-201ENST00000253794 TRIAP1O43715 76 aa8.4□□□□□ -1.06
VPS25-201ENST00000253794 SPRR1BP22528 89 aa8.39□□□□□ -1.07
VPS25-201ENST00000253794 SLC25A20O43772 301 aa8.38□□□□□ -1.07
VPS25-201ENST00000253794 MT1HL1P0DM35 61 aa8.38□□□□□ -1.07
VPS25-201ENST00000253794 KRTAP10-8P60410 259 aa8.38□□□□□ -1.07
VPS25-201ENST00000253794 IGLV5-48A0A075B6I7 105 aa8.37□□□□□ -1.07
VPS25-201ENST00000253794 A0A1B0GX51 115 aa8.37□□□□□ -1.07
VPS25-201ENST00000253794 hADV29S1A0JD25 119 aa8.37□□□□□ -1.07
VPS25-201ENST00000253794 ST20-AS1Q8NBB2 130 aa8.37□□□□□ -1.07
VPS25-201ENST00000253794 A0A087X002 238 aa8.36□□□□□ -1.07
VPS25-201ENST00000253794 CRYGAP11844 174 aa8.36□□□□□ -1.07
VPS25-201ENST00000253794 COX6CP09669 75 aa8.35□□□□□ -1.07
VPS25-201ENST00000253794 LINC01547P58512 204 aaPredicted RBP8.35□□□□□ -1.07
VPS25-201ENST00000253794 PRR26Q8N8Z3 221 aa8.35□□□□□ -1.07
VPS25-201ENST00000253794 FAM218AQ96MZ4 157 aa8.35□□□□□ -1.07
VPS25-201ENST00000253794 ANAPC11Q9NYG5 84 aa8.35□□□□□ -1.07
VPS25-201ENST00000253794 PSMB2P49721 201 aa8.34□□□□□ -1.07
VPS25-201ENST00000253794 BATFQ16520 125 aa8.34□□□□□ -1.07
VPS25-201ENST00000253794 GAGE2AQ6NT46 116 aa8.34□□□□□ -1.07
VPS25-201ENST00000253794 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.34□□□□□ -1.07
VPS25-201ENST00000253794 SNHG12Q9BXW3 62 aa8.34□□□□□ -1.07
VPS25-201ENST00000253794 DMBT1Q9UGM3 2413 aaPredicted RBP8.34□□□□□ -1.07
VPS25-201ENST00000253794 KRTAP13-2Q52LG2 175 aa8.33□□□□□ -1.08
VPS25-201ENST00000253794 TEX49A0A1B0GTD5 131 aa8.32□□□□□ -1.08
VPS25-201ENST00000253794 SNCGO76070 127 aa8.32□□□□□ -1.08
VPS25-201ENST00000253794 Q6ZQY7 126 aa8.32□□□□□ -1.08
VPS25-201ENST00000253794 PPDPFLQ8WWR9 84 aa8.31□□□□□ -1.08
VPS25-201ENST00000253794 TAX1BP3O14907 124 aa8.3□□□□□ -1.08
VPS25-201ENST00000253794 OCIAD2Q56VL3 154 aa8.3□□□□□ -1.08
VPS25-201ENST00000253794 Q8N377 158 aa8.3□□□□□ -1.08
VPS25-201ENST00000253794 CLEC2BQ92478 149 aa8.3□□□□□ -1.08
VPS25-201ENST00000253794 J3QL48 77 aa8.29□□□□□ -1.08
VPS25-201ENST00000253794 LST1O00453 97 aa8.29□□□□□ -1.08
VPS25-201ENST00000253794 C9orf118A6NHY6 69 aa8.28□□□□□ -1.08
VPS25-201ENST00000253794 PCP4L1A6NKN8 68 aa8.28□□□□□ -1.08
VPS25-201ENST00000253794 TRACP01848 142 aa8.28□□□□□ -1.08
VPS25-201ENST00000253794 SMIM29Q86T20 159 aa8.28□□□□□ -1.08
VPS25-201ENST00000253794 C3orf22Q8N5N4 141 aa8.28□□□□□ -1.08
VPS25-201ENST00000253794 SCGB1C2P0DMR2 95 aa8.27□□□□□ -1.09
VPS25-201ENST00000253794 COL5A1-AS1Q5SY13 56 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms