RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 TM2D3Q9BRN9 247 aa3.08□□□□□ -1.92
VPS13C-201ENST00000249837 LINC01556Q5JQF7 62 aa3.08□□□□□ -1.92
VPS13C-201ENST00000249837 KRTAP1-3Q8IUG1 177 aa3.08□□□□□ -1.92
VPS13C-201ENST00000249837 A0A0G2JQZ4 141 aa3.08□□□□□ -1.92
VPS13C-201ENST00000249837 A0A1W2PNN7 141 aa3.08□□□□□ -1.92
VPS13C-201ENST00000249837 LINC01600Q96MT4 127 aa3.08□□□□□ -1.92
VPS13C-201ENST00000249837 PRR15LQ9BU68 103 aa3.08□□□□□ -1.92
VPS13C-201ENST00000249837 DMBT1Q9UGM3 2413 aaPredicted RBP3.07□□□□□ -1.92
VPS13C-201ENST00000249837 ELOF1P60002 83 aaKnown RBP3.07□□□□□ -1.92
VPS13C-201ENST00000249837 CASC2Q6XLA1 102 aa3.07□□□□□ -1.92
VPS13C-201ENST00000249837 GVQW2A0A096LPI5 108 aaPredicted RBP3.07□□□□□ -1.92
VPS13C-201ENST00000249837 BCE1O60756 84 aa3.07□□□□□ -1.92
VPS13C-201ENST00000249837 SMIM29Q86T20 159 aa3.07□□□□□ -1.92
VPS13C-201ENST00000249837 LINC00612Q8N6U2 182 aa3.07□□□□□ -1.92
VPS13C-201ENST00000249837 Q8NBF4 154 aa3.07□□□□□ -1.92
VPS13C-201ENST00000249837 H0Y9P7 68 aa3.07□□□□□ -1.92
VPS13C-201ENST00000249837 SERTAD4-AS1Q5TG53 156 aa3.07□□□□□ -1.92
VPS13C-201ENST00000249837 ZZEF1O43149 2961 aa3.07□□□□□ -1.92
VPS13C-201ENST00000249837 V9GYY9 64 aa3.06□□□□□ -1.92
VPS13C-201ENST00000249837 HCG22E2RYF7 251 aa3.06□□□□□ -1.92
VPS13C-201ENST00000249837 Q6ZRP5 223 aa3.06□□□□□ -1.92
VPS13C-201ENST00000249837 KMT2BQ9UMN6 2715 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-201ENST00000249837 RPL37AP61513 92 aaKnown RBP3.06□□□□□ -1.92
VPS13C-201ENST00000249837 FBN2P35556 2912 aa3.06□□□□□ -1.92
VPS13C-201ENST00000249837 LINC00474Q9P2X8 69 aa3.06□□□□□ -1.92
VPS13C-201ENST00000249837 PCOTHQ58A44 107 aa3.06□□□□□ -1.92
VPS13C-201ENST00000249837 OBSCN-AS1Q96MR7 158 aa3.05□□□□□ -1.92
VPS13C-201ENST00000249837 LINC00528Q8N1L1 170 aa3.05□□□□□ -1.92
VPS13C-201ENST00000249837 C15orf56Q8N910 161 aa3.05□□□□□ -1.92
VPS13C-201ENST00000249837 F8WDY8 70 aa3.05□□□□□ -1.92
VPS13C-201ENST00000249837 RETNLBQ9BQ08 111 aa3.05□□□□□ -1.92
VPS13C-201ENST00000249837 CHTF8P0CG12 524 aa3.05□□□□□ -1.92
VPS13C-201ENST00000249837 C4orf48Q5BLP8 95 aa3.05□□□□□ -1.92
VPS13C-201ENST00000249837 C1orf64Q8NEQ6 169 aa3.05□□□□□ -1.92
VPS13C-201ENST00000249837 LINC00476Q8WZB0 136 aa3.05□□□□□ -1.92
VPS13C-201ENST00000249837 USP34Q70CQ2 3546 aa3.05□□□□□ -1.92
VPS13C-201ENST00000249837 Q8NDZ9 215 aa3.05□□□□□ -1.92
VPS13C-201ENST00000249837 CYSTM1Q9H1C7 97 aa3.05□□□□□ -1.92
VPS13C-201ENST00000249837 CASC10Q5T4H9 136 aa3.04□□□□□ -1.92
VPS13C-201ENST00000249837 NIPBLQ6KC79 2804 aaeCLIP3.04□□□□□ -1.92
VPS13C-201ENST00000249837 KRTAP10-11P60412 298 aa3.04□□□□□ -1.92
VPS13C-201ENST00000249837 IGHV6-1A0A0B4J1U7 121 aa3.04□□□□□ -1.92
VPS13C-201ENST00000249837 KRTAP1-1Q07627 177 aa3.04□□□□□ -1.92
VPS13C-201ENST00000249837 LINC00588Q9Y4M8 146 aa3.04□□□□□ -1.92
VPS13C-201ENST00000249837 H7BZZ5 65 aa3.04□□□□□ -1.92
VPS13C-201ENST00000249837 PHF5AQ7RTV0 110 aaKnown RBP3.04□□□□□ -1.92
VPS13C-201ENST00000249837 TRBV7-4A0A0J9YYF1 115 aa3.03□□□□□ -1.92
VPS13C-201ENST00000249837 Q8N377 158 aa3.03□□□□□ -1.92
VPS13C-201ENST00000249837 Q6ZRX8 168 aa3.03□□□□□ -1.92
VPS13C-201ENST00000249837 ERC2-IT1O76042 136 aa3.03□□□□□ -1.92
VPS13C-201ENST00000249837 PRO0628Q9UI54 55 aa3.03□□□□□ -1.92
VPS13C-201ENST00000249837 PRR34Q9NV39 138 aa3.03□□□□□ -1.92
VPS13C-201ENST00000249837 CIRBP-AS1Q8TBR5 109 aa3.03□□□□□ -1.92
VPS13C-201ENST00000249837 KCNQ1DNQ9H478 68 aa3.03□□□□□ -1.92
VPS13C-201ENST00000249837 BOD1L1Q8NFC6 3051 aa3.02□□□□□ -1.93
VPS13C-201ENST00000249837 ASH1LQ9NR48 2969 aaKnown RBP3.02□□□□□ -1.93
VPS13C-201ENST00000249837 DNAH10OSP0CZ25 163 aa3.02□□□□□ -1.93
VPS13C-201ENST00000249837 KRTAP24-1Q3LI83 254 aa3.02□□□□□ -1.93
VPS13C-201ENST00000249837 A0A1W2PNM2 257 aa3.02□□□□□ -1.93
VPS13C-201ENST00000249837 K7EQZ3 153 aa3.02□□□□□ -1.93
VPS13C-201ENST00000249837 ZNF706Q9Y5V0 76 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-201ENST00000249837 REV3LO60673 3130 aa3.01□□□□□ -1.93
VPS13C-201ENST00000249837 LINC00336Q6ZUF6 198 aa3.01□□□□□ -1.93
VPS13C-201ENST00000249837 DMXL2Q8TDJ6 3036 aa3.01□□□□□ -1.93
VPS13C-201ENST00000249837 EPM2AB3EWF7 344 aa3.01□□□□□ -1.93
VPS13C-201ENST00000249837 COL6A3P12111 3177 aa3.01□□□□□ -1.93
VPS13C-201ENST00000249837 H3BNG1 76 aa3.01□□□□□ -1.93
VPS13C-201ENST00000249837 PMAIP1Q13794 54 aa3.01□□□□□ -1.93
VPS13C-201ENST00000249837 LY6G6CO95867 125 aa3□□□□□ -1.93
VPS13C-201ENST00000249837 WDFY3Q8IZQ1 3526 aa3□□□□□ -1.93
VPS13C-201ENST00000249837 hDV103S1A0JD37 113 aa3□□□□□ -1.93
VPS13C-201ENST00000249837 SPEGQ15772 3267 aa3□□□□□ -1.93
VPS13C-201ENST00000249837 ATMQ13315 3056 aa3□□□□□ -1.93
VPS13C-201ENST00000249837 TENM3Q9P273 2699 aa3□□□□□ -1.93
VPS13C-201ENST00000249837 IGLV1-50A0A075B6I6 118 aa3□□□□□ -1.93
VPS13C-201ENST00000249837 KLKP1Q107X0 134 aa3□□□□□ -1.93
VPS13C-201ENST00000249837 MOBPQ13875 183 aa3□□□□□ -1.93
VPS13C-201ENST00000249837 SPAG11AQ6PDA7 123 aa2.99□□□□□ -1.93
VPS13C-201ENST00000249837 OXTP01178 125 aa2.99□□□□□ -1.93
VPS13C-201ENST00000249837 ADGRG4Q8IZF6 3080 aa2.98□□□□□ -1.93
VPS13C-201ENST00000249837 A8MUN3 132 aa2.98□□□□□ -1.93
VPS13C-201ENST00000249837 C16orf90A8MZG2 172 aa2.98□□□□□ -1.93
VPS13C-201ENST00000249837 MYO15AQ9UKN7 3530 aa2.97□□□□□ -1.93
VPS13C-201ENST00000249837 A0A1B0GW54 56 aa2.97□□□□□ -1.93
VPS13C-201ENST00000249837 IGFL1Q6UW32 110 aa2.97□□□□□ -1.93
VPS13C-201ENST00000249837 PRR15Q8IV56 129 aa2.97□□□□□ -1.93
VPS13C-201ENST00000249837 LIMD2Q9BT23 127 aa2.97□□□□□ -1.93
VPS13C-201ENST00000249837 IGLV5-52A0A0A0MRZ9 124 aa2.97□□□□□ -1.93
VPS13C-201ENST00000249837 OCR1Q9BZK8 76 aa2.97□□□□□ -1.93
VPS13C-201ENST00000249837 MXRA5Q9NR99 2828 aa2.97□□□□□ -1.93
VPS13C-201ENST00000249837 TRAV22A0A0B4J277 110 aa2.97□□□□□ -1.93
VPS13C-201ENST00000249837 DCHS2Q6V1P9 2916 aa2.97□□□□□ -1.93
VPS13C-201ENST00000249837 IGKV2D-30A0A075B6S6 120 aa2.97□□□□□ -1.93
VPS13C-201ENST00000249837 IGKV2-30P06310 120 aa2.97□□□□□ -1.93
VPS13C-201ENST00000249837 PLA2G2DQ9UNK4 145 aa2.97□□□□□ -1.93
VPS13C-201ENST00000249837 TNRC18O15417 2968 aaPredicted RBP2.97□□□□□ -1.93
VPS13C-201ENST00000249837 CFAP47Q6ZTR5 3102 aa2.97□□□□□ -1.93
VPS13C-201ENST00000249837 K7EIL1 84 aa2.96□□□□□ -1.94
VPS13C-201ENST00000249837 MDFIQ99750 246 aa2.96□□□□□ -1.94
VPS13C-201ENST00000249837 SEC61GP60059 68 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms