RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 KRTAP13-1Q8IUC0 172 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 OCC1Q8TAD7 63 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 LINC00614P0C842 121 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 PNRC1Q12796 327 aaPredicted RBP1.32□□□□□ -2.2
PRKD3-201ENST00000234179 CBLN2Q8IUK8 224 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 LINC00167Q96N53 147 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 C9JQL5 133 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 HIST1H4AP62805 103 aaKnown RBP1.32□□□□□ -2.2
PRKD3-201ENST00000234179 KRTAP13-3Q3SY46 172 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 Q5BKY6 102 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 C9orf129Q5T035 196 aaKnown RBP1.32□□□□□ -2.2
PRKD3-201ENST00000234179 Q8N8P6 123 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 AMELXQ99217 191 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 NAT8Q9UHE5 227 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 LCE5AQ5TCM9 118 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 FAM19A1Q7Z5A9 133 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 COX7B2Q8TF08 81 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 TOMM7Q9P0U1 55 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 IGLV4-3A0A075B6K6 122 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 MRPL51Q4U2R6 128 aaKnown RBP1.31□□□□□ -2.2
PRKD3-201ENST00000234179 RNASE7Q9H1E1 156 aaKnown RBP1.31□□□□□ -2.2
PRKD3-201ENST00000234179 TRAV23DV6A0A075B6W5 121 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 TINCRA0A1B0GVN0 87 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 M0R378 163 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 IFITM1P13164 125 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 RBM3P98179 157 aaKnown RBP1.31□□□□□ -2.2
PRKD3-201ENST00000234179 IFITM3Q01628 133 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 LINC00518Q8N0U6 118 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 SPRR4Q96PI1 79 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 IGLV5-45A0A087WSX0 123 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 E9PLD3 99 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 H3BQ85 93 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 IFITM2Q01629 132 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 MEIG1Q5JSS6 88 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 C10orf25Q5T742 122 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 ATOH7Q8N100 152 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 SERP1Q9Y6X1 66 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 KRTAP13-2Q52LG2 175 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 SLC7A5P1Q8MH63 180 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 A0A087X002 238 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 TMEM238C9JI98 176 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 NDUFS5O43920 106 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 TMEM126AQ9H061 195 aa1.31□□□□□ -2.2
PRKD3-201ENST00000234179 ETDCA0A1B0GVM5 59 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 SMIM27A0A1W2PRY6 76 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 FAM168BA1KXE4 195 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 J3QQQ9 107 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 CD164Q04900 197 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 K7EN84 100 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 ATXN8Q156A1 80 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 LINC00483Q53H64 154 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 CASC2Q6XLA1 102 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 HIST1H4GQ99525 98 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 PRO1933Q9H354 126 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 ERG28Q9UKR5 140 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 SMIM13P0DJ93 91 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 MP68P56378 58 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 SMIM20Q8N5G0 67 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 CHCHD1Q96BP2 118 aaKnown RBP1.3□□□□□ -2.2
PRKD3-201ENST00000234179 PLEKHB2Q96CS7 222 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 V9GYV3 84 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 TRBV10-2A0A0K0K1G8 114 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 A6NED7 52 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 D6R8Y8 96 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 HERV-K104P63124 156 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 C9orf153Q5TBE3 101 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 XAGE1AQ9HD64 81 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 NHP2Q9NX24 153 aaKnown RBP1.3□□□□□ -2.2
PRKD3-201ENST00000234179 MUC17Q685J3 4493 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 A0A1B0GXF2 115 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 IGKV2-30P06310 120 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 CAMK2N1Q7Z7J9 78 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 Q8NBF4 154 aa1.3□□□□□ -2.2
PRKD3-201ENST00000234179 KRTAP23-1A1A580 65 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 NDUFB1O75438 58 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 HIGD2AQ9BW72 106 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 SMIM1B2RUZ4 78 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 NPYP01303 97 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 HBDP02042 147 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 RPL39P62891 51 aaKnown RBP1.29□□□□□ -2.2
PRKD3-201ENST00000234179 KRTAP7-1Q8IUC3 87 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 RETNLBQ9BQ08 111 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 FAM240AA0A1B0GVK7 77 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 IGIPA6NJ69 53 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 SRP19P09132 144 aaKnown RBP1.29□□□□□ -2.2
PRKD3-201ENST00000234179 RNASE13Q5GAN3 156 aaKnown RBP1.29□□□□□ -2.2
PRKD3-201ENST00000234179 CLLU1Q5K131 121 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 C10orf91Q5T1B1 145 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 Q5XG85 94 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 COX6B2Q6YFQ2 88 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 TOMM6Q96B49 74 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 LEPROTL1O95214 131 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 KRTAP11-1Q8IUC1 163 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 YPEL4Q96NS1 127 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 DSCR8Q96T75 97 aa1.29□□□□□ -2.2
PRKD3-201ENST00000234179 IGLV5-39A0A0G2JS06 123 aa1.28□□□□□ -2.2
PRKD3-201ENST00000234179 SPRR1AP35321 89 aa1.28□□□□□ -2.2
PRKD3-201ENST00000234179 KCNQ1DNQ9H478 68 aa1.28□□□□□ -2.2
PRKD3-201ENST00000234179 CDKN2A-AS1Q9UH64 79 aa1.28□□□□□ -2.2
PRKD3-201ENST00000234179 SMKR1H3BMG3 65 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms