RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 WWC2-AS2Q96NR7 200 aa3.88□□□□□ -1.79
RFX4-201ENST00000229387 NDUFB1O75438 58 aa3.87□□□□□ -1.79
RFX4-201ENST00000229387 Q6YL49 198 aa3.87□□□□□ -1.79
RFX4-201ENST00000229387 Q9BRP9 147 aa3.87□□□□□ -1.79
RFX4-201ENST00000229387 CHCHD7Q9BUK0 85 aa3.87□□□□□ -1.79
RFX4-201ENST00000229387 KRTAP9-6A0A140TA67 174 aa3.87□□□□□ -1.79
RFX4-201ENST00000229387 TRBV6-4A0A1B0GX49 114 aa3.87□□□□□ -1.79
RFX4-201ENST00000229387 H0Y9J4 135 aa3.87□□□□□ -1.79
RFX4-201ENST00000229387 IGKV4-1P06312 121 aa3.87□□□□□ -1.79
RFX4-201ENST00000229387 OTOGQ6ZRI0 2925 aa3.86□□□□□ -1.79
RFX4-201ENST00000229387 A6NED7 52 aa3.86□□□□□ -1.79
RFX4-201ENST00000229387 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.86□□□□□ -1.79
RFX4-201ENST00000229387 COX6A2Q02221 97 aa3.86□□□□□ -1.79
RFX4-201ENST00000229387 LINC00242Q5T6M2 205 aa3.86□□□□□ -1.79
RFX4-201ENST00000229387 CCL18P55774 89 aa3.86□□□□□ -1.79
RFX4-201ENST00000229387 TOMM7Q9P0U1 55 aa3.86□□□□□ -1.79
RFX4-201ENST00000229387 DSCR9P59020 149 aa3.85□□□□□ -1.79
RFX4-201ENST00000229387 PRR15LQ9BU68 103 aa3.85□□□□□ -1.79
RFX4-201ENST00000229387 VWFP04275 2813 aa3.85□□□□□ -1.79
RFX4-201ENST00000229387 M0R2N4 97 aa3.85□□□□□ -1.79
RFX4-201ENST00000229387 TEP1Q99973 2627 aaKnown RBP3.85□□□□□ -1.79
RFX4-201ENST00000229387 DNAJC9-AS1A6NH13 148 aa3.85□□□□□ -1.79
RFX4-201ENST00000229387 H3BUA1 57 aa3.85□□□□□ -1.79
RFX4-201ENST00000229387 ATRQ13535 2644 aa3.84□□□□□ -1.79
RFX4-201ENST00000229387 IGLV9-49A0A0B4J1Y8 123 aa3.84□□□□□ -1.79
RFX4-201ENST00000229387 LORP23490 312 aaPredicted RBP3.84□□□□□ -1.79
RFX4-201ENST00000229387 REG3GQ6UW15 175 aa3.84□□□□□ -1.79
RFX4-201ENST00000229387 LINC00467Q9BRT7 94 aa3.84□□□□□ -1.79
RFX4-201ENST00000229387 SPANXA2-OT1Q8N9U9 137 aa3.84□□□□□ -1.79
RFX4-201ENST00000229387 K7EQD1 137 aa3.83□□□□□ -1.8
RFX4-201ENST00000229387 MUC7Q8TAX7 377 aa3.83□□□□□ -1.8
RFX4-201ENST00000229387 TRGV1A0A0A0MS02 117 aa3.83□□□□□ -1.8
RFX4-201ENST00000229387 B9D2Q9BPU9 175 aa3.83□□□□□ -1.8
RFX4-201ENST00000229387 CR1P17927 2039 aa3.83□□□□□ -1.8
RFX4-201ENST00000229387 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
RFX4-201ENST00000229387 INAFM1C9JVW0 142 aa3.82□□□□□ -1.8
RFX4-201ENST00000229387 NANOS2P60321 138 aaKnown RBP3.82□□□□□ -1.8
RFX4-201ENST00000229387 LINC00575Q6W349 94 aa3.82□□□□□ -1.8
RFX4-201ENST00000229387 CELA1Q9UNI1 258 aa3.82□□□□□ -1.8
RFX4-201ENST00000229387 PDZD2O15018 2839 aa3.82□□□□□ -1.8
RFX4-201ENST00000229387 IGLV4-60A0A075B6I1 120 aa3.82□□□□□ -1.8
RFX4-201ENST00000229387 PLAC8Q9NZF1 115 aa3.82□□□□□ -1.8
RFX4-201ENST00000229387 IGHV3OR16-9A0A0B4J2B5 98 aa3.81□□□□□ -1.8
RFX4-201ENST00000229387 DEFB4AO15263 64 aa3.81□□□□□ -1.8
RFX4-201ENST00000229387 REG3AQ06141 175 aa3.81□□□□□ -1.8
RFX4-201ENST00000229387 LINC00208Q96KT6 92 aa3.81□□□□□ -1.8
RFX4-201ENST00000229387 TRRAPQ9Y4A5 3859 aa3.81□□□□□ -1.8
RFX4-201ENST00000229387 TENM1Q9UKZ4 2725 aa3.81□□□□□ -1.8
RFX4-201ENST00000229387 FSHBP01225 129 aa3.81□□□□□ -1.8
RFX4-201ENST00000229387 LINC00158P58513 81 aa3.81□□□□□ -1.8
RFX4-201ENST00000229387 PRR3P79522 188 aaKnown RBP3.81□□□□□ -1.8
RFX4-201ENST00000229387 CASC2Q6XLA1 102 aa3.81□□□□□ -1.8
RFX4-201ENST00000229387 SCXQ7RTU7 201 aa3.81□□□□□ -1.8
RFX4-201ENST00000229387 LINC01006Q8NI28 216 aa3.81□□□□□ -1.8
RFX4-201ENST00000229387 COX7B2Q8TF08 81 aa3.81□□□□□ -1.8
RFX4-201ENST00000229387 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.8□□□□□ -1.8
RFX4-201ENST00000229387 A0A096LPF7 62 aa3.8□□□□□ -1.8
RFX4-201ENST00000229387 NOP10Q9NPE3 64 aaKnown RBP3.8□□□□□ -1.8
RFX4-201ENST00000229387 IGHV4-28A0A0C4DH34 117 aa3.8□□□□□ -1.8
RFX4-201ENST00000229387 LINC00612Q8N6U2 182 aa3.8□□□□□ -1.8
RFX4-201ENST00000229387 TRGV2A0A075B6R0 118 aa3.8□□□□□ -1.8
RFX4-201ENST00000229387 ETDCA0A1B0GVM5 59 aa3.8□□□□□ -1.8
RFX4-201ENST00000229387 CDK2AP2O75956 126 aa3.8□□□□□ -1.8
RFX4-201ENST00000229387 C4orf3Q8WVX3 66 aa3.79□□□□□ -1.8
RFX4-201ENST00000229387 LINC01558Q9Y6Z2 57 aa3.79□□□□□ -1.8
RFX4-201ENST00000229387 KRTAP23-1A1A580 65 aa3.79□□□□□ -1.8
RFX4-201ENST00000229387 DEFB130BP0DP73 79 aa3.79□□□□□ -1.8
RFX4-201ENST00000229387 DEFB130AP0DP74 79 aa3.79□□□□□ -1.8
RFX4-201ENST00000229387 COX7BP24311 80 aa3.79□□□□□ -1.8
RFX4-201ENST00000229387 INSP01308 110 aa3.79□□□□□ -1.8
RFX4-201ENST00000229387 C6orf99Q4VX62 202 aa3.79□□□□□ -1.8
RFX4-201ENST00000229387 PRAC1Q96KF2 57 aa3.79□□□□□ -1.8
RFX4-201ENST00000229387 HIVEP1P15822 2718 aa3.78□□□□□ -1.8
RFX4-201ENST00000229387 J3QKU1 62 aa3.78□□□□□ -1.8
RFX4-201ENST00000229387 CNBPP62633 177 aaKnown RBP3.78□□□□□ -1.8
RFX4-201ENST00000229387 A0A1B0GW54 56 aa3.78□□□□□ -1.8
RFX4-201ENST00000229387 KRTAP1-1Q07627 177 aa3.78□□□□□ -1.8
RFX4-201ENST00000229387 SMIM29Q86T20 159 aa3.78□□□□□ -1.8
RFX4-201ENST00000229387 IGHV4-30-4P0DP06 118 aa3.77□□□□□ -1.81
RFX4-201ENST00000229387 F8P00451 2351 aa3.77□□□□□ -1.81
RFX4-201ENST00000229387 KCNQ1DNQ9H478 68 aa3.77□□□□□ -1.81
RFX4-201ENST00000229387 IGHV6-1A0A0B4J1U7 121 aa3.77□□□□□ -1.81
RFX4-201ENST00000229387 CLPSL2Q6UWE3 100 aa3.77□□□□□ -1.81
RFX4-201ENST00000229387 TRGV4A0A0C4DH28 118 aa3.76□□□□□ -1.81
RFX4-201ENST00000229387 Q8N9L7 120 aa3.76□□□□□ -1.81
RFX4-201ENST00000229387 ZNF706Q9Y5V0 76 aaPredicted RBP3.76□□□□□ -1.81
RFX4-201ENST00000229387 H3BPC8 53 aa3.76□□□□□ -1.81
RFX4-201ENST00000229387 KRTAP10-3P60369 221 aa3.76□□□□□ -1.81
RFX4-201ENST00000229387 ANK3Q12955 4377 aaKnown RBP3.76□□□□□ -1.81
RFX4-201ENST00000229387 KRTAP4-8A0A0G2JLE6 195 aa3.76□□□□□ -1.81
RFX4-201ENST00000229387 NOTCH2NLQ7Z3S9 236 aa3.76□□□□□ -1.81
RFX4-201ENST00000229387 LINC00476Q8WZB0 136 aa3.76□□□□□ -1.81
RFX4-201ENST00000229387 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.75□□□□□ -1.81
RFX4-201ENST00000229387 RTL8CO15255 209 aa3.75□□□□□ -1.81
RFX4-201ENST00000229387 GIG44P09565 113 aaPredicted RBP3.75□□□□□ -1.81
RFX4-201ENST00000229387 IGLV1-51P01701 117 aa3.74□□□□□ -1.81
RFX4-201ENST00000229387 HTN3P15516 51 aa3.74□□□□□ -1.81
RFX4-201ENST00000229387 RETNLBQ9BQ08 111 aa3.74□□□□□ -1.81
RFX4-201ENST00000229387 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.74□□□□□ -1.81
RFX4-201ENST00000229387 NOTCH1P46531 2555 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms